EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000020611 (Gene tree)
Gene ID: 108303548
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 360 bases
Position: chrKV389474.1:7258201-7258560
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000005720	LSM	PF01423.22	3.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000023062	-	360	-	ENSCCAP00000005720	119 (aa)	-	A0A2K5PQ17

Gene Model

Click here to download ENSCCAG00000020611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000020611's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000020611	-	94	95.536	ENSCCAG00000016652	-	94	95.536
ENSCCAG00000020611	-	100	99.160	ENSCCAG00000032658	SNRPD1	100	99.160
ENSCCAG00000020611	-	84	30.000	ENSCCAG00000018913	-	60	32.432
ENSCCAG00000020611	-	81	94.792	ENSCCAG00000005390	-	81	94.792

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000020611	-	100	99.160	ENSG00000167088	SNRPD1	100	100.000	Homo_sapiens
ENSCCAG00000020611	-	94	95.536	ENSAPOG00000019446	snrpd1	61	95.536	Acanthochromis_polyacanthus
ENSCCAG00000020611	-	98	97.436	ENSAMEG00000002576	SNRPD1	100	97.436	Ailuropoda_melanoleuca
ENSCCAG00000020611	-	88	95.238	ENSACIG00000011263	snrpd1	94	95.238	Amphilophus_citrinellus
ENSCCAG00000020611	-	94	95.536	ENSAOCG00000007406	snrpd1	94	95.536	Amphiprion_ocellaris
ENSCCAG00000020611	-	94	91.071	ENSAPEG00000014961	snrpd1	94	91.071	Amphiprion_percula
ENSCCAG00000020611	-	88	95.238	ENSAPEG00000012539	SNRPD1	94	95.238	Amphiprion_percula
ENSCCAG00000020611	-	94	95.536	ENSATEG00000014399	snrpd1	94	95.536	Anabas_testudineus
ENSCCAG00000020611	-	97	99.130	ENSAPLG00000012256	SNRPD1	97	99.130	Anas_platyrhynchos
ENSCCAG00000020611	-	100	99.160	ENSACAG00000006364	SNRPD1	100	99.160	Anolis_carolinensis
ENSCCAG00000020611	-	100	99.160	ENSANAG00000025641	SNRPD1	100	99.160	Aotus_nancymaae
ENSCCAG00000020611	-	88	95.238	ENSACLG00000017406	snrpd1	94	95.238	Astatotilapia_calliptera
ENSCCAG00000020611	-	100	96.639	ENSAMXG00000004589	snrpd1	100	96.639	Astyanax_mexicanus
ENSCCAG00000020611	-	81	96.875	ENSBTAG00000012376	-	72	96.875	Bos_taurus
ENSCCAG00000020611	-	79	93.617	ENSBTAG00000055316	-	81	93.617	Bos_taurus
ENSCCAG00000020611	-	100	99.160	ENSBTAG00000008292	SNRPD1	100	99.160	Bos_taurus
ENSCCAG00000020611	-	94	95.536	ENSBTAG00000047266	-	94	95.536	Bos_taurus
ENSCCAG00000020611	-	74	79.545	WBGene00004916	snr-3	76	75.000	Caenorhabditis_elegans
ENSCCAG00000020611	-	100	99.160	ENSCJAG00000042955	SNRPD1	100	99.160	Callithrix_jacchus
ENSCCAG00000020611	-	100	99.160	ENSCAFG00000018247	SNRPD1	100	99.160	Canis_familiaris
ENSCCAG00000020611	-	80	98.947	ENSCAFG00020015914	SNRPD1	74	98.947	Canis_lupus_dingo
ENSCCAG00000020611	-	100	96.639	ENSCHIG00000005557	SNRPD1	100	96.639	Capra_hircus
ENSCCAG00000020611	-	100	99.160	ENSTSYG00000030028	SNRPD1	100	99.160	Carlito_syrichta
ENSCCAG00000020611	-	97	98.261	ENSCAPG00000008103	SNRPD1	99	98.261	Cavia_aperea
ENSCCAG00000020611	-	100	99.160	ENSCPOG00000004679	SNRPD1	100	99.160	Cavia_porcellus
ENSCCAG00000020611	-	100	99.160	ENSCATG00000039978	SNRPD1	100	99.160	Cercocebus_atys
ENSCCAG00000020611	-	100	99.160	ENSCLAG00000008691	SNRPD1	100	99.160	Chinchilla_lanigera
ENSCCAG00000020611	-	100	99.160	ENSCSAG00000017654	SNRPD1	100	99.160	Chlorocebus_sabaeus
ENSCCAG00000020611	-	100	99.160	ENSCPBG00000023143	SNRPD1	100	99.160	Chrysemys_picta_bellii
ENSCCAG00000020611	-	72	86.047	ENSCING00000024100	-	69	86.047	Ciona_intestinalis
ENSCCAG00000020611	-	73	83.908	ENSCSAVG00000004578	-	70	83.908	Ciona_savignyi
ENSCCAG00000020611	-	81	73.958	ENSCGRG00001009945	-	85	73.958	Cricetulus_griseus_chok1gshd
ENSCCAG00000020611	-	100	99.160	ENSCGRG00001021055	-	100	99.160	Cricetulus_griseus_chok1gshd
ENSCCAG00000020611	-	81	73.958	ENSCGRG00000006224	-	85	73.958	Cricetulus_griseus_crigri
ENSCCAG00000020611	-	100	99.160	ENSCGRG00000000490	-	100	99.160	Cricetulus_griseus_crigri
ENSCCAG00000020611	-	80	93.684	ENSCSEG00000018141	snrpd1	81	93.750	Cynoglossus_semilaevis
ENSCCAG00000020611	-	94	95.536	ENSCVAG00000000534	snrpd1	94	95.536	Cyprinodon_variegatus
ENSCCAG00000020611	-	100	96.639	ENSDARG00000011648	snrpd1	100	96.639	Danio_rerio
ENSCCAG00000020611	-	100	99.160	ENSDNOG00000040310	SNRPD1	100	99.160	Dasypus_novemcinctus
ENSCCAG00000020611	-	100	99.160	ENSDORG00000008349	Snrpd1	100	99.160	Dipodomys_ordii
ENSCCAG00000020611	-	79	81.915	FBgn0261933	SmD1	76	81.915	Drosophila_melanogaster
ENSCCAG00000020611	-	74	100.000	ENSETEG00000011689	SNRPD1	74	100.000	Echinops_telfairi
ENSCCAG00000020611	-	94	91.964	ENSEBUG00000003170	snrpd1	94	91.964	Eptatretus_burgeri
ENSCCAG00000020611	-	94	99.107	ENSEASG00005002433	SNRPD1	100	99.107	Equus_asinus_asinus
ENSCCAG00000020611	-	94	99.107	ENSECAG00000014373	SNRPD1	100	99.107	Equus_caballus
ENSCCAG00000020611	-	75	98.876	ENSEEUG00000004987	SNRPD1	100	98.876	Erinaceus_europaeus
ENSCCAG00000020611	-	93	84.685	ENSELUG00000000088	snrpd1	79	94.681	Esox_lucius
ENSCCAG00000020611	-	100	99.160	ENSFCAG00000012352	SNRPD1	100	99.160	Felis_catus
ENSCCAG00000020611	-	94	99.107	ENSFALG00000002646	SNRPD1	100	99.107	Ficedula_albicollis
ENSCCAG00000020611	-	100	96.639	ENSGMOG00000015607	snrpd1	100	96.639	Gadus_morhua
ENSCCAG00000020611	-	100	99.160	ENSGALG00000041334	SNRPD1	100	99.160	Gallus_gallus
ENSCCAG00000020611	-	94	95.536	ENSGAFG00000011171	snrpd1	94	95.536	Gambusia_affinis
ENSCCAG00000020611	-	100	96.639	ENSGACG00000005201	SNRPD1	100	96.639	Gasterosteus_aculeatus
ENSCCAG00000020611	-	100	99.160	ENSGAGG00000011197	SNRPD1	100	99.160	Gopherus_agassizii
ENSCCAG00000020611	-	81	93.750	ENSGGOG00000026706	-	80	93.750	Gorilla_gorilla
ENSCCAG00000020611	-	100	99.160	ENSGGOG00000041053	SNRPD1	100	99.160	Gorilla_gorilla
ENSCCAG00000020611	-	94	95.536	ENSHBUG00000003236	snrpd1	94	95.536	Haplochromis_burtoni
ENSCCAG00000020611	-	100	99.160	ENSHGLG00000007152	SNRPD1	100	99.160	Heterocephalus_glaber_female
ENSCCAG00000020611	-	100	99.160	ENSHGLG00100008618	SNRPD1	100	99.160	Heterocephalus_glaber_male
ENSCCAG00000020611	-	94	95.536	ENSIPUG00000003576	snrpd1	94	95.536	Ictalurus_punctatus
ENSCCAG00000020611	-	100	99.160	ENSSTOG00000000485	SNRPD1	100	99.160	Ictidomys_tridecemlineatus
ENSCCAG00000020611	-	100	99.160	ENSJJAG00000017698	Snrpd1	100	99.160	Jaculus_jaculus
ENSCCAG00000020611	-	94	95.536	ENSKMAG00000005987	snrpd1	94	95.536	Kryptolebias_marmoratus
ENSCCAG00000020611	-	94	95.536	ENSLBEG00000003327	snrpd1	94	95.536	Labrus_bergylta
ENSCCAG00000020611	-	100	99.160	ENSLACG00000001955	SNRPD1	100	99.160	Latimeria_chalumnae
ENSCCAG00000020611	-	98	96.581	ENSLOCG00000002003	snrpd1	100	96.581	Lepisosteus_oculatus
ENSCCAG00000020611	-	99	97.458	ENSLAFG00000005819	SNRPD1	100	97.458	Loxodonta_africana
ENSCCAG00000020611	-	100	99.160	ENSMFAG00000042080	SNRPD1	100	99.160	Macaca_fascicularis
ENSCCAG00000020611	-	96	99.123	ENSMMUG00000003992	SNRPD1	97	99.123	Macaca_mulatta
ENSCCAG00000020611	-	100	99.160	ENSMNEG00000041296	SNRPD1	100	99.160	Macaca_nemestrina
ENSCCAG00000020611	-	100	99.160	ENSMLEG00000028659	SNRPD1	100	99.160	Mandrillus_leucophaeus
ENSCCAG00000020611	-	94	95.536	ENSMAMG00000012971	snrpd1	94	95.536	Mastacembelus_armatus
ENSCCAG00000020611	-	94	95.536	ENSMZEG00005004685	snrpd1	94	95.536	Maylandia_zebra
ENSCCAG00000020611	-	97	99.130	ENSMGAG00000011598	SNRPD1	95	99.130	Meleagris_gallopavo
ENSCCAG00000020611	-	81	83.333	ENSMAUG00000016467	-	86	83.333	Mesocricetus_auratus
ENSCCAG00000020611	-	82	93.814	ENSMAUG00000006829	-	62	93.814	Mesocricetus_auratus
ENSCCAG00000020611	-	81	83.333	ENSMAUG00000016502	-	86	83.333	Mesocricetus_auratus
ENSCCAG00000020611	-	100	99.160	ENSMICG00000044066	SNRPD1	100	99.160	Microcebus_murinus
ENSCCAG00000020611	-	100	99.160	ENSMOCG00000017367	Snrpd1	100	99.160	Microtus_ochrogaster
ENSCCAG00000020611	-	94	95.536	ENSMMOG00000019089	snrpd1	94	95.536	Mola_mola
ENSCCAG00000020611	-	100	99.160	ENSMODG00000021487	SNRPD1	100	99.160	Monodelphis_domestica
ENSCCAG00000020611	-	94	95.536	ENSMALG00000014459	snrpd1	94	95.536	Monopterus_albus
ENSCCAG00000020611	-	100	99.160	MGP_CAROLIEiJ_G0021994	Snrpd1	100	99.160	Mus_caroli
ENSCCAG00000020611	-	100	99.160	ENSMUSG00000002477	Snrpd1	100	99.160	Mus_musculus
ENSCCAG00000020611	-	100	99.160	MGP_PahariEiJ_G0018731	Snrpd1	100	99.160	Mus_pahari
ENSCCAG00000020611	-	100	99.160	MGP_SPRETEiJ_G0022910	Snrpd1	100	99.160	Mus_spretus
ENSCCAG00000020611	-	98	97.436	ENSMPUG00000005567	-	100	97.436	Mustela_putorius_furo
ENSCCAG00000020611	-	100	98.319	ENSMPUG00000020041	-	100	98.319	Mustela_putorius_furo
ENSCCAG00000020611	-	97	96.552	ENSMLUG00000009124	SNRPD1	90	96.552	Myotis_lucifugus
ENSCCAG00000020611	-	100	99.160	ENSNGAG00000023946	Snrpd1	100	99.160	Nannospalax_galili
ENSCCAG00000020611	-	79	94.681	ENSNBRG00000012119	snrpd1	78	94.681	Neolamprologus_brichardi
ENSCCAG00000020611	-	100	96.639	ENSNLEG00000031430	SNRPD1	100	96.639	Nomascus_leucogenys
ENSCCAG00000020611	-	100	99.160	ENSODEG00000005764	SNRPD1	100	99.160	Octodon_degus
ENSCCAG00000020611	-	94	95.536	ENSONIG00000002486	snrpd1	94	95.536	Oreochromis_niloticus
ENSCCAG00000020611	-	82	87.755	ENSOANG00000004638	-	82	87.755	Ornithorhynchus_anatinus
ENSCCAG00000020611	-	98	97.436	ENSOCUG00000023761	-	100	97.436	Oryctolagus_cuniculus
ENSCCAG00000020611	-	100	98.319	ENSOCUG00000014399	-	100	98.319	Oryctolagus_cuniculus
ENSCCAG00000020611	-	88	95.238	ENSORLG00000012516	snrpd1	94	95.238	Oryzias_latipes
ENSCCAG00000020611	-	94	95.536	ENSORLG00020005743	snrpd1	94	95.536	Oryzias_latipes_hni
ENSCCAG00000020611	-	94	95.536	ENSORLG00015013402	snrpd1	94	95.536	Oryzias_latipes_hsok
ENSCCAG00000020611	-	94	95.536	ENSOMEG00000011571	snrpd1	94	95.536	Oryzias_melastigma
ENSCCAG00000020611	-	100	95.798	ENSOGAG00000007833	SNRPD1	100	95.798	Otolemur_garnettii
ENSCCAG00000020611	-	100	94.118	ENSOARG00000003413	-	85	94.118	Ovis_aries
ENSCCAG00000020611	-	100	99.160	ENSPPAG00000042593	SNRPD1	100	99.160	Pan_paniscus
ENSCCAG00000020611	-	100	99.160	ENSPPRG00000002399	SNRPD1	100	99.160	Panthera_pardus
ENSCCAG00000020611	-	94	71.429	ENSPPRG00000005009	-	92	71.429	Panthera_pardus
ENSCCAG00000020611	-	96	99.123	ENSPTIG00000013206	SNRPD1	100	99.123	Panthera_tigris_altaica
ENSCCAG00000020611	-	100	99.160	ENSPTRG00000009909	SNRPD1	100	99.160	Pan_troglodytes
ENSCCAG00000020611	-	86	93.137	ENSPTRG00000050159	-	87	93.137	Pan_troglodytes
ENSCCAG00000020611	-	100	99.160	ENSPANG00000023478	SNRPD1	100	99.160	Papio_anubis
ENSCCAG00000020611	-	88	94.286	ENSPKIG00000021610	snrpd1	94	94.286	Paramormyrops_kingsleyae
ENSCCAG00000020611	-	100	96.639	ENSPKIG00000003985	SNRPD1	100	96.639	Paramormyrops_kingsleyae
ENSCCAG00000020611	-	94	95.536	ENSPMGG00000001862	snrpd1	94	95.536	Periophthalmus_magnuspinnatus
ENSCCAG00000020611	-	100	99.160	ENSPEMG00000014773	-	100	99.160	Peromyscus_maniculatus_bairdii
ENSCCAG00000020611	-	86	81.731	ENSPMAG00000003938	-	85	81.731	Petromyzon_marinus
ENSCCAG00000020611	-	100	99.160	ENSPCIG00000020320	SNRPD1	100	99.160	Phascolarctos_cinereus
ENSCCAG00000020611	-	81	94.792	ENSPFOG00000012448	SNRPD1	85	94.792	Poecilia_formosa
ENSCCAG00000020611	-	81	94.792	ENSPLAG00000006738	snrpd1	85	94.792	Poecilia_latipinna
ENSCCAG00000020611	-	81	94.792	ENSPMEG00000021942	snrpd1	85	94.792	Poecilia_mexicana
ENSCCAG00000020611	-	94	95.536	ENSPREG00000007094	snrpd1	94	95.536	Poecilia_reticulata
ENSCCAG00000020611	-	100	99.160	ENSPPYG00000025874	SNRPD1	100	99.160	Pongo_abelii
ENSCCAG00000020611	-	100	99.160	ENSPCOG00000013327	SNRPD1	100	99.160	Propithecus_coquereli
ENSCCAG00000020611	-	100	99.160	ENSPVAG00000005511	SNRPD1	80	99.160	Pteropus_vampyrus
ENSCCAG00000020611	-	94	95.536	ENSPNAG00000017824	snrpd1	94	95.536	Pygocentrus_nattereri
ENSCCAG00000020611	-	100	99.160	ENSRNOG00000013714	Snrpd1	100	99.160	Rattus_norvegicus
ENSCCAG00000020611	-	100	99.160	ENSRBIG00000022996	SNRPD1	100	99.160	Rhinopithecus_bieti
ENSCCAG00000020611	-	100	99.160	ENSRROG00000027640	SNRPD1	100	99.160	Rhinopithecus_roxellana
ENSCCAG00000020611	-	100	99.160	ENSSBOG00000020998	SNRPD1	100	99.160	Saimiri_boliviensis_boliviensis
ENSCCAG00000020611	-	100	99.160	ENSSHAG00000011791	SNRPD1	100	99.160	Sarcophilus_harrisii
ENSCCAG00000020611	-	94	94.643	ENSSFOG00015008809	-	94	94.643	Scleropages_formosus
ENSCCAG00000020611	-	94	94.643	ENSSFOG00015022253	-	94	94.643	Scleropages_formosus
ENSCCAG00000020611	-	94	94.643	ENSSMAG00000008765	snrpd1	94	94.643	Scophthalmus_maximus
ENSCCAG00000020611	-	91	94.444	ENSSDUG00000010521	snrpd1	92	94.444	Seriola_dumerili
ENSCCAG00000020611	-	94	95.536	ENSSLDG00000011858	snrpd1	94	95.536	Seriola_lalandi_dorsalis
ENSCCAG00000020611	-	56	98.507	ENSSARG00000004271	SNRPD1	100	98.507	Sorex_araneus
ENSCCAG00000020611	-	100	99.160	ENSSPUG00000002824	SNRPD1	100	99.160	Sphenodon_punctatus
ENSCCAG00000020611	-	88	95.238	ENSSPAG00000015229	snrpd1	94	95.238	Stegastes_partitus
ENSCCAG00000020611	-	100	99.160	ENSSSCG00000003701	SNRPD1	100	99.160	Sus_scrofa
ENSCCAG00000020611	-	97	99.130	ENSTGUG00000005095	SNRPD1	97	99.130	Taeniopygia_guttata
ENSCCAG00000020611	-	88	95.238	ENSTRUG00000008977	snrpd1	94	95.238	Takifugu_rubripes
ENSCCAG00000020611	-	81	91.667	ENSTNIG00000001224	snrpd1	92	91.667	Tetraodon_nigroviridis
ENSCCAG00000020611	-	74	100.000	ENSTBEG00000013776	SNRPD1	100	100.000	Tupaia_belangeri
ENSCCAG00000020611	-	97	99.130	ENSTTRG00000002654	SNRPD1	100	99.130	Tursiops_truncatus
ENSCCAG00000020611	-	96	99.123	ENSUAMG00000013431	SNRPD1	97	99.123	Ursus_americanus
ENSCCAG00000020611	-	100	99.160	ENSUMAG00000019740	SNRPD1	100	99.160	Ursus_maritimus
ENSCCAG00000020611	-	100	99.160	ENSVPAG00000010056	SNRPD1	80	99.160	Vicugna_pacos
ENSCCAG00000020611	-	94	99.107	ENSVVUG00000004009	SNRPD1	100	99.107	Vulpes_vulpes
ENSCCAG00000020611	-	100	97.479	ENSXETG00000027354	snrpd1	100	97.479	Xenopus_tropicalis
ENSCCAG00000020611	-	94	95.536	ENSXCOG00000020108	snrpd1	94	95.536	Xiphophorus_couchianus
ENSCCAG00000020611	-	94	95.536	ENSXMAG00000003368	snrpd1	94	95.536	Xiphophorus_maculatus