EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000020665 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 243 bases
Position: chrKV389519.1:6009766-6010008
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000005811	LSM	PF01423.22	3.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000023163	-	243	-	ENSCCAP00000005811	80 (aa)	-	A0A2K5PQC2

Gene Model

Click here to download ENSCCAG00000020665's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000020665's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000020665	-	83	45.455	ENSCCAG00000033627	-	52	45.455
ENSCCAG00000020665	-	99	98.734	ENSCCAG00000036437	LSM6	99	98.734
ENSCCAG00000020665	-	83	51.515	ENSCCAG00000017356	-	77	51.515
ENSCCAG00000020665	-	83	51.515	ENSCCAG00000037378	-	77	51.515

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000020665	-	99	98.734	ENSG00000164167	LSM6	99	98.734	Homo_sapiens
ENSCCAG00000020665	-	99	94.937	ENSAPOG00000019832	lsm6	99	94.937	Acanthochromis_polyacanthus
ENSCCAG00000020665	-	99	98.734	ENSAMEG00000016671	LSM6	99	98.734	Ailuropoda_melanoleuca
ENSCCAG00000020665	-	99	94.937	ENSACIG00000016711	lsm6	99	94.937	Amphilophus_citrinellus
ENSCCAG00000020665	-	99	94.937	ENSAOCG00000002110	lsm6	51	94.937	Amphiprion_ocellaris
ENSCCAG00000020665	-	99	94.937	ENSAPEG00000023992	lsm6	99	94.937	Amphiprion_percula
ENSCCAG00000020665	-	99	94.937	ENSATEG00000012610	lsm6	99	94.937	Anabas_testudineus
ENSCCAG00000020665	-	95	98.684	ENSAPLG00000012594	LSM6	97	98.684	Anas_platyrhynchos
ENSCCAG00000020665	-	99	98.734	ENSACAG00000004004	LSM6	99	98.734	Anolis_carolinensis
ENSCCAG00000020665	-	99	84.810	ENSANAG00000021839	-	99	84.810	Aotus_nancymaae
ENSCCAG00000020665	-	99	98.734	ENSANAG00000030568	-	99	98.734	Aotus_nancymaae
ENSCCAG00000020665	-	99	94.937	ENSACLG00000025621	lsm6	99	94.937	Astatotilapia_calliptera
ENSCCAG00000020665	-	99	94.937	ENSAMXG00000038738	lsm6	99	94.937	Astyanax_mexicanus
ENSCCAG00000020665	-	99	92.405	ENSBTAG00000052085	-	99	92.405	Bos_taurus
ENSCCAG00000020665	-	99	98.734	ENSBTAG00000014060	LSM6	99	98.734	Bos_taurus
ENSCCAG00000020665	-	94	81.333	WBGene00003080	lsm-6	97	81.333	Caenorhabditis_elegans
ENSCCAG00000020665	-	99	98.734	ENSCJAG00000002482	LSM6	99	98.734	Callithrix_jacchus
ENSCCAG00000020665	-	99	98.734	ENSCAFG00000007738	LSM6	99	98.734	Canis_familiaris
ENSCCAG00000020665	-	99	98.734	ENSCAFG00020025902	LSM6	99	98.734	Canis_lupus_dingo
ENSCCAG00000020665	-	89	98.592	ENSCHIG00000012864	-	100	98.592	Capra_hircus
ENSCCAG00000020665	-	99	98.734	ENSCHIG00000010334	-	99	98.734	Capra_hircus
ENSCCAG00000020665	-	99	82.278	ENSCHIG00000024198	-	93	82.278	Capra_hircus
ENSCCAG00000020665	-	99	98.734	ENSTSYG00000026972	LSM6	99	98.734	Carlito_syrichta
ENSCCAG00000020665	-	80	90.625	ENSTSYG00000012759	-	84	90.625	Carlito_syrichta
ENSCCAG00000020665	-	81	95.385	ENSCAPG00000011179	-	100	95.385	Cavia_aperea
ENSCCAG00000020665	-	99	98.734	ENSCAPG00000008104	LSM6	99	98.734	Cavia_aperea
ENSCCAG00000020665	-	99	98.734	ENSCPOG00000032655	LSM6	99	98.734	Cavia_porcellus
ENSCCAG00000020665	-	99	70.886	ENSCATG00000038799	-	99	70.886	Cercocebus_atys
ENSCCAG00000020665	-	99	98.734	ENSCATG00000002770	-	99	98.734	Cercocebus_atys
ENSCCAG00000020665	-	89	78.873	ENSCLAG00000005685	-	100	78.873	Chinchilla_lanigera
ENSCCAG00000020665	-	99	98.734	ENSCLAG00000005495	LSM6	99	98.734	Chinchilla_lanigera
ENSCCAG00000020665	-	99	98.734	ENSCSAG00000003421	LSM6	99	98.734	Chlorocebus_sabaeus
ENSCCAG00000020665	-	99	77.215	ENSCHOG00000003420	LSM6	98	77.215	Choloepus_hoffmanni
ENSCCAG00000020665	-	99	98.734	ENSCPBG00000027472	LSM6	83	98.734	Chrysemys_picta_bellii
ENSCCAG00000020665	-	95	96.053	ENSCING00000019152	-	93	96.053	Ciona_intestinalis
ENSCCAG00000020665	-	96	94.805	ENSCSAVG00000002065	-	94	94.805	Ciona_savignyi
ENSCCAG00000020665	-	99	98.734	ENSCANG00000041263	-	99	98.734	Colobus_angolensis_palliatus
ENSCCAG00000020665	-	99	98.734	ENSCANG00000006849	-	99	98.734	Colobus_angolensis_palliatus
ENSCCAG00000020665	-	99	69.620	ENSCANG00000035214	-	99	69.620	Colobus_angolensis_palliatus
ENSCCAG00000020665	-	99	98.734	ENSCGRG00001017142	Lsm6	99	98.734	Cricetulus_griseus_chok1gshd
ENSCCAG00000020665	-	99	98.734	ENSCGRG00000008320	Lsm6	99	98.734	Cricetulus_griseus_crigri
ENSCCAG00000020665	-	99	94.937	ENSCSEG00000000423	lsm6	99	94.937	Cynoglossus_semilaevis
ENSCCAG00000020665	-	99	94.937	ENSCVAG00000001592	lsm6	99	94.937	Cyprinodon_variegatus
ENSCCAG00000020665	-	99	94.937	ENSDARG00000036995	lsm6	99	94.937	Danio_rerio
ENSCCAG00000020665	-	99	97.468	ENSDNOG00000044848	-	99	97.468	Dasypus_novemcinctus
ENSCCAG00000020665	-	86	98.551	ENSDNOG00000040186	-	74	98.551	Dasypus_novemcinctus
ENSCCAG00000020665	-	99	98.734	ENSDORG00000000933	Lsm6	99	98.734	Dipodomys_ordii
ENSCCAG00000020665	-	96	85.714	FBgn0034564	CG9344	97	85.714	Drosophila_melanogaster
ENSCCAG00000020665	-	59	100.000	ENSETEG00000013098	LSM6	98	100.000	Echinops_telfairi
ENSCCAG00000020665	-	99	98.734	ENSEBUG00000017073	lsm6	99	98.734	Eptatretus_burgeri
ENSCCAG00000020665	-	86	98.551	ENSEASG00005001533	LSM6	72	98.551	Equus_asinus_asinus
ENSCCAG00000020665	-	99	98.734	ENSECAG00000021036	LSM6	99	98.734	Equus_caballus
ENSCCAG00000020665	-	98	70.513	ENSEEUG00000002101	LSM6	99	70.513	Erinaceus_europaeus
ENSCCAG00000020665	-	99	94.937	ENSELUG00000014301	LSM6	99	94.937	Esox_lucius
ENSCCAG00000020665	-	99	98.734	ENSFCAG00000003047	LSM6	99	98.734	Felis_catus
ENSCCAG00000020665	-	99	98.734	ENSFALG00000005509	LSM6	91	98.734	Ficedula_albicollis
ENSCCAG00000020665	-	99	98.734	ENSFDAG00000020913	-	99	98.734	Fukomys_damarensis
ENSCCAG00000020665	-	99	87.342	ENSFDAG00000019073	-	99	87.342	Fukomys_damarensis
ENSCCAG00000020665	-	99	94.937	ENSFHEG00000007948	lsm6	99	94.937	Fundulus_heteroclitus
ENSCCAG00000020665	-	99	94.937	ENSGMOG00000015550	lsm6	99	94.937	Gadus_morhua
ENSCCAG00000020665	-	99	98.734	ENSGALG00000009985	LSM6	99	98.734	Gallus_gallus
ENSCCAG00000020665	-	99	94.937	ENSGAFG00000017763	lsm6	99	94.937	Gambusia_affinis
ENSCCAG00000020665	-	100	93.750	ENSGACG00000017223	lsm6	100	93.750	Gasterosteus_aculeatus
ENSCCAG00000020665	-	99	98.734	ENSGAGG00000020980	LSM6	99	98.734	Gopherus_agassizii
ENSCCAG00000020665	-	99	98.734	ENSGGOG00000001310	LSM6	99	98.734	Gorilla_gorilla
ENSCCAG00000020665	-	99	94.937	ENSHBUG00000008618	lsm6	99	94.937	Haplochromis_burtoni
ENSCCAG00000020665	-	99	98.734	ENSHGLG00000000205	LSM6	99	98.734	Heterocephalus_glaber_female
ENSCCAG00000020665	-	99	98.734	ENSHGLG00100014341	LSM6	99	98.734	Heterocephalus_glaber_male
ENSCCAG00000020665	-	99	94.937	ENSHCOG00000005591	lsm6	99	94.937	Hippocampus_comes
ENSCCAG00000020665	-	99	93.671	ENSIPUG00000004508	lsm6	99	93.671	Ictalurus_punctatus
ENSCCAG00000020665	-	99	98.734	ENSSTOG00000002678	LSM6	99	98.734	Ictidomys_tridecemlineatus
ENSCCAG00000020665	-	99	98.734	ENSJJAG00000013845	-	99	98.734	Jaculus_jaculus
ENSCCAG00000020665	-	95	77.632	ENSJJAG00000016942	-	96	77.632	Jaculus_jaculus
ENSCCAG00000020665	-	99	88.608	ENSJJAG00000011211	-	99	88.608	Jaculus_jaculus
ENSCCAG00000020665	-	99	94.937	ENSKMAG00000004105	lsm6	99	94.937	Kryptolebias_marmoratus
ENSCCAG00000020665	-	99	94.937	ENSLBEG00000018441	lsm6	99	94.937	Labrus_bergylta
ENSCCAG00000020665	-	99	98.734	ENSLACG00000006937	LSM6	99	98.734	Latimeria_chalumnae
ENSCCAG00000020665	-	99	94.937	ENSLOCG00000008852	lsm6	99	94.937	Lepisosteus_oculatus
ENSCCAG00000020665	-	99	93.671	ENSLOCG00000017683	-	99	93.671	Lepisosteus_oculatus
ENSCCAG00000020665	-	99	98.734	ENSLAFG00000001952	LSM6	99	98.734	Loxodonta_africana
ENSCCAG00000020665	-	99	98.734	ENSMFAG00000033073	LSM6	99	98.734	Macaca_fascicularis
ENSCCAG00000020665	-	99	98.734	ENSMNEG00000034820	-	99	98.734	Macaca_nemestrina
ENSCCAG00000020665	-	99	72.152	ENSMNEG00000040412	-	99	72.152	Macaca_nemestrina
ENSCCAG00000020665	-	99	98.734	ENSMLEG00000035153	LSM6	99	98.734	Mandrillus_leucophaeus
ENSCCAG00000020665	-	99	94.937	ENSMAMG00000014029	lsm6	99	94.937	Mastacembelus_armatus
ENSCCAG00000020665	-	99	94.937	ENSMZEG00005009146	lsm6	99	94.937	Maylandia_zebra
ENSCCAG00000020665	-	99	98.734	ENSMGAG00000003802	LSM6	99	98.734	Meleagris_gallopavo
ENSCCAG00000020665	-	99	98.734	ENSMAUG00000014938	Lsm6	99	98.734	Mesocricetus_auratus
ENSCCAG00000020665	-	98	89.744	ENSMICG00000047411	-	92	89.744	Microcebus_murinus
ENSCCAG00000020665	-	99	98.734	ENSMICG00000042599	LSM6	99	98.734	Microcebus_murinus
ENSCCAG00000020665	-	99	98.734	ENSMOCG00000020049	Lsm6	99	98.734	Microtus_ochrogaster
ENSCCAG00000020665	-	99	94.937	ENSMMOG00000005470	lsm6	99	94.937	Mola_mola
ENSCCAG00000020665	-	99	88.608	ENSMMOG00000007379	-	99	88.608	Mola_mola
ENSCCAG00000020665	-	99	98.734	ENSMODG00000000526	LSM6	99	98.734	Monodelphis_domestica
ENSCCAG00000020665	-	99	94.937	ENSMALG00000002419	lsm6	99	94.937	Monopterus_albus
ENSCCAG00000020665	-	99	98.734	MGP_CAROLIEiJ_G0031245	Lsm6	99	98.734	Mus_caroli
ENSCCAG00000020665	-	99	98.734	ENSMUSG00000031683	Lsm6	99	98.734	Mus_musculus
ENSCCAG00000020665	-	99	98.734	MGP_PahariEiJ_G0022851	Lsm6	99	98.734	Mus_pahari
ENSCCAG00000020665	-	99	98.734	MGP_SPRETEiJ_G0032365	Lsm6	99	98.734	Mus_spretus
ENSCCAG00000020665	-	99	98.734	ENSMPUG00000006936	LSM6	92	98.734	Mustela_putorius_furo
ENSCCAG00000020665	-	99	98.734	ENSMLUG00000026355	LSM6	99	98.734	Myotis_lucifugus
ENSCCAG00000020665	-	99	98.734	ENSNGAG00000019116	Lsm6	99	98.734	Nannospalax_galili
ENSCCAG00000020665	-	99	94.937	ENSNBRG00000004887	lsm6	99	94.937	Neolamprologus_brichardi
ENSCCAG00000020665	-	99	98.734	ENSNLEG00000005584	LSM6	99	98.734	Nomascus_leucogenys
ENSCCAG00000020665	-	99	97.468	ENSOPRG00000011199	LSM6	99	97.468	Ochotona_princeps
ENSCCAG00000020665	-	99	96.203	ENSODEG00000020420	-	99	96.203	Octodon_degus
ENSCCAG00000020665	-	99	97.468	ENSODEG00000002307	-	99	97.468	Octodon_degus
ENSCCAG00000020665	-	99	94.937	ENSODEG00000019419	-	99	94.937	Octodon_degus
ENSCCAG00000020665	-	96	87.013	ENSODEG00000018684	-	100	87.013	Octodon_degus
ENSCCAG00000020665	-	99	94.937	ENSONIG00000010005	lsm6	99	94.937	Oreochromis_niloticus
ENSCCAG00000020665	-	96	74.026	ENSOANG00000006895	-	99	74.026	Ornithorhynchus_anatinus
ENSCCAG00000020665	-	96	74.026	ENSOANG00000006894	-	99	74.026	Ornithorhynchus_anatinus
ENSCCAG00000020665	-	99	93.671	ENSORLG00000024158	lsm6	99	93.671	Oryzias_latipes
ENSCCAG00000020665	-	99	93.671	ENSORLG00020017383	lsm6	99	93.671	Oryzias_latipes_hni
ENSCCAG00000020665	-	99	93.671	ENSORLG00015016903	lsm6	99	93.671	Oryzias_latipes_hsok
ENSCCAG00000020665	-	99	94.937	ENSOMEG00000000074	lsm6	99	94.937	Oryzias_melastigma
ENSCCAG00000020665	-	99	98.734	ENSOGAG00000033153	-	99	98.734	Otolemur_garnettii
ENSCCAG00000020665	-	99	98.734	ENSOGAG00000026665	-	99	98.734	Otolemur_garnettii
ENSCCAG00000020665	-	86	98.551	ENSOARG00000008509	-	88	98.551	Ovis_aries
ENSCCAG00000020665	-	99	93.671	ENSOARG00000011641	-	92	93.671	Ovis_aries
ENSCCAG00000020665	-	99	98.734	ENSPPAG00000037929	LSM6	99	98.734	Pan_paniscus
ENSCCAG00000020665	-	99	98.734	ENSPPRG00000012806	LSM6	99	98.734	Panthera_pardus
ENSCCAG00000020665	-	99	98.734	ENSPTIG00000019769	LSM6	99	98.734	Panthera_tigris_altaica
ENSCCAG00000020665	-	99	98.734	ENSPTRG00000016488	LSM6	99	98.734	Pan_troglodytes
ENSCCAG00000020665	-	99	98.734	ENSPANG00000006552	LSM6	99	98.734	Papio_anubis
ENSCCAG00000020665	-	99	94.937	ENSPKIG00000016176	lsm6	99	94.937	Paramormyrops_kingsleyae
ENSCCAG00000020665	-	99	98.734	ENSPSIG00000016942	LSM6	99	98.734	Pelodiscus_sinensis
ENSCCAG00000020665	-	99	94.937	ENSPMGG00000018004	lsm6	99	94.937	Periophthalmus_magnuspinnatus
ENSCCAG00000020665	-	99	98.734	ENSPEMG00000012410	Lsm6	99	98.734	Peromyscus_maniculatus_bairdii
ENSCCAG00000020665	-	99	98.734	ENSPMAG00000006949	lsm6	99	98.734	Petromyzon_marinus
ENSCCAG00000020665	-	99	98.734	ENSPCIG00000023469	LSM6	80	98.551	Phascolarctos_cinereus
ENSCCAG00000020665	-	99	94.937	ENSPFOG00000008881	lsm6	99	94.937	Poecilia_formosa
ENSCCAG00000020665	-	99	94.937	ENSPLAG00000003202	lsm6	99	94.937	Poecilia_latipinna
ENSCCAG00000020665	-	99	94.937	ENSPMEG00000004000	lsm6	99	94.937	Poecilia_mexicana
ENSCCAG00000020665	-	99	94.937	ENSPREG00000023235	lsm6	99	94.937	Poecilia_reticulata
ENSCCAG00000020665	-	99	98.734	ENSPPYG00000015105	LSM6	99	98.734	Pongo_abelii
ENSCCAG00000020665	-	99	98.734	ENSPCOG00000013899	LSM6	99	98.734	Propithecus_coquereli
ENSCCAG00000020665	-	99	94.937	ENSPNYG00000012614	lsm6	99	94.937	Pundamilia_nyererei
ENSCCAG00000020665	-	99	94.937	ENSPNAG00000018779	lsm6	99	94.937	Pygocentrus_nattereri
ENSCCAG00000020665	-	99	98.734	ENSRNOG00000049370	LOC100360750	99	98.734	Rattus_norvegicus
ENSCCAG00000020665	-	99	98.734	ENSRNOG00000030374	Lsm6	99	98.734	Rattus_norvegicus
ENSCCAG00000020665	-	99	98.734	ENSRBIG00000027878	LSM6	99	98.734	Rhinopithecus_bieti
ENSCCAG00000020665	-	99	98.734	ENSRROG00000024868	LSM6	99	98.734	Rhinopithecus_roxellana
ENSCCAG00000020665	-	84	45.070	YDR378C	-	83	49.296	Saccharomyces_cerevisiae
ENSCCAG00000020665	-	99	72.152	ENSSBOG00000028103	-	99	72.152	Saimiri_boliviensis_boliviensis
ENSCCAG00000020665	-	99	98.734	ENSSBOG00000021229	-	99	98.734	Saimiri_boliviensis_boliviensis
ENSCCAG00000020665	-	99	94.937	ENSSFOG00015016480	lsm6	99	94.937	Scleropages_formosus
ENSCCAG00000020665	-	99	94.937	ENSSMAG00000004550	lsm6	99	94.937	Scophthalmus_maximus
ENSCCAG00000020665	-	86	95.652	ENSSLDG00000004136	-	59	95.652	Seriola_lalandi_dorsalis
ENSCCAG00000020665	-	99	94.937	ENSSLDG00000020533	lsm6	82	94.937	Seriola_lalandi_dorsalis
ENSCCAG00000020665	-	59	100.000	ENSSARG00000000689	LSM6	98	100.000	Sorex_araneus
ENSCCAG00000020665	-	99	98.734	ENSSPUG00000008657	LSM6	99	98.734	Sphenodon_punctatus
ENSCCAG00000020665	-	99	94.937	ENSSPAG00000003246	lsm6	99	94.937	Stegastes_partitus
ENSCCAG00000020665	-	99	98.734	ENSSSCG00000035973	LSM6	99	98.734	Sus_scrofa
ENSCCAG00000020665	-	99	98.734	ENSTGUG00000002663	LSM6	99	98.734	Taeniopygia_guttata
ENSCCAG00000020665	-	99	94.937	ENSTRUG00000023398	lsm6	99	94.937	Takifugu_rubripes
ENSCCAG00000020665	-	99	94.937	ENSTNIG00000017725	lsm6	99	94.937	Tetraodon_nigroviridis
ENSCCAG00000020665	-	99	98.734	ENSTTRG00000004609	LSM6	99	98.734	Tursiops_truncatus
ENSCCAG00000020665	-	100	88.750	ENSUAMG00000014213	LSM6	66	88.750	Ursus_americanus
ENSCCAG00000020665	-	100	88.750	ENSUMAG00000015727	LSM6	66	88.750	Ursus_maritimus
ENSCCAG00000020665	-	99	98.734	ENSVPAG00000006922	LSM6	99	98.734	Vicugna_pacos
ENSCCAG00000020665	-	99	98.734	ENSVVUG00000009254	LSM6	68	98.734	Vulpes_vulpes
ENSCCAG00000020665	-	99	98.734	ENSXETG00000023683	lsm6	99	98.734	Xenopus_tropicalis
ENSCCAG00000020665	-	99	94.937	ENSXMAG00000009606	lsm6	99	94.937	Xiphophorus_maculatus