EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000020671 (Gene tree)
Gene ID: 108290030
Gene Symbol: SBDS
Alias: CGI-97|FLJ10917|SDS|SWDS
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 9863 bases
Position: chrKV389845.1:846881-856743
Accession: 108290030
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000005839	SBDS	PF01172.18	3.9e-32	1	1
ENSCCAP00000005845	SBDS	PF01172.18	5.5e-25	1	1
ENSCCAP00000005839	SBDS_C	PF09377.10	3.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000023198	SBDS-202	270	-	ENSCCAP00000005845	89 (aa)	-	A0A2K5PQD7
ENSCCAT00000023191	SBDS-201	3908	XM_017509717	ENSCCAP00000005839	250 (aa)	XP_017365206	A0A2K5PQC5

Gene Model

Click here to download ENSCCAG00000020671's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000020671's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000020671	SBDS	100	99.600	ENSG00000126524	SBDS	100	99.600	Homo_sapiens
ENSCCAG00000020671	SBDS	99	83.133	ENSAPOG00000014285	sbds	100	83.133	Acanthochromis_polyacanthus
ENSCCAG00000020671	SBDS	100	98.400	ENSAMEG00000018167	SBDS	100	98.400	Ailuropoda_melanoleuca
ENSCCAG00000020671	SBDS	93	89.157	ENSACIG00000007308	sbds	100	82.540	Amphilophus_citrinellus
ENSCCAG00000020671	SBDS	99	83.133	ENSAOCG00000016770	sbds	100	83.133	Amphiprion_ocellaris
ENSCCAG00000020671	SBDS	99	83.534	ENSAPEG00000015897	sbds	100	83.534	Amphiprion_percula
ENSCCAG00000020671	SBDS	99	83.534	ENSATEG00000006901	sbds	100	83.534	Anabas_testudineus
ENSCCAG00000020671	SBDS	92	92.208	ENSANAG00000024342	-	97	92.208	Aotus_nancymaae
ENSCCAG00000020671	SBDS	83	99.034	ENSANAG00000037501	-	100	99.034	Aotus_nancymaae
ENSCCAG00000020671	SBDS	99	83.936	ENSACLG00000018750	sbds	100	83.936	Astatotilapia_calliptera
ENSCCAG00000020671	SBDS	100	84.400	ENSAMXG00000005361	sbds	100	84.400	Astyanax_mexicanus
ENSCCAG00000020671	SBDS	100	98.400	ENSBTAG00000004051	SBDS	100	98.400	Bos_taurus
ENSCCAG00000020671	SBDS	92	75.610	WBGene00021063	sbds-1	97	56.911	Caenorhabditis_elegans
ENSCCAG00000020671	SBDS	100	98.400	ENSCJAG00000041007	SBDS	100	98.400	Callithrix_jacchus
ENSCCAG00000020671	SBDS	100	96.429	ENSCAFG00000010797	SBDS	100	96.429	Canis_familiaris
ENSCCAG00000020671	SBDS	100	98.800	ENSCAFG00020005357	SBDS	100	98.800	Canis_lupus_dingo
ENSCCAG00000020671	SBDS	100	99.200	ENSCHIG00000026854	SBDS	100	99.200	Capra_hircus
ENSCCAG00000020671	SBDS	100	99.600	ENSTSYG00000033822	SBDS	100	99.600	Carlito_syrichta
ENSCCAG00000020671	SBDS	66	96.951	ENSCAPG00000006634	SBDS	100	96.951	Cavia_aperea
ENSCCAG00000020671	SBDS	100	98.000	ENSCPOG00000036143	SBDS	100	98.000	Cavia_porcellus
ENSCCAG00000020671	SBDS	100	99.600	ENSCATG00000039026	SBDS	100	99.600	Cercocebus_atys
ENSCCAG00000020671	SBDS	99	70.968	ENSCLAG00000002113	-	99	70.968	Chinchilla_lanigera
ENSCCAG00000020671	SBDS	100	97.600	ENSCLAG00000005721	-	100	97.600	Chinchilla_lanigera
ENSCCAG00000020671	SBDS	100	99.600	ENSCSAG00000018275	SBDS	100	99.600	Chlorocebus_sabaeus
ENSCCAG00000020671	SBDS	100	94.000	ENSCHOG00000003795	SBDS	100	94.000	Choloepus_hoffmanni
ENSCCAG00000020671	SBDS	100	89.200	ENSCPBG00000014893	SBDS	100	89.200	Chrysemys_picta_bellii
ENSCCAG00000020671	SBDS	93	77.108	ENSCSAVG00000011811	-	100	66.800	Ciona_savignyi
ENSCCAG00000020671	SBDS	100	99.200	ENSCANG00000032368	SBDS	100	99.200	Colobus_angolensis_palliatus
ENSCCAG00000020671	SBDS	66	94.512	ENSCGRG00001019886	Sbds	100	94.512	Cricetulus_griseus_chok1gshd
ENSCCAG00000020671	SBDS	93	100.000	ENSCGRG00001000088	-	82	100.000	Cricetulus_griseus_chok1gshd
ENSCCAG00000020671	SBDS	83	95.652	ENSCGRG00000009211	Sbds	100	95.652	Cricetulus_griseus_crigri
ENSCCAG00000020671	SBDS	99	81.526	ENSCSEG00000005798	sbds	100	81.526	Cynoglossus_semilaevis
ENSCCAG00000020671	SBDS	93	90.361	ENSCVAG00000001053	sbds	100	81.526	Cyprinodon_variegatus
ENSCCAG00000020671	SBDS	100	84.000	ENSDARG00000027803	sbds	100	84.000	Danio_rerio
ENSCCAG00000020671	SBDS	100	98.400	ENSDNOG00000041174	SBDS	100	98.400	Dasypus_novemcinctus
ENSCCAG00000020671	SBDS	100	95.600	ENSDORG00000026218	Sbds	100	95.600	Dipodomys_ordii
ENSCCAG00000020671	SBDS	91	75.309	FBgn0035714	CG8549	99	59.036	Drosophila_melanogaster
ENSCCAG00000020671	SBDS	93	57.940	ENSEBUG00000015780	sbds	100	57.940	Eptatretus_burgeri
ENSCCAG00000020671	SBDS	100	99.200	ENSEASG00005008821	SBDS	100	99.200	Equus_asinus_asinus
ENSCCAG00000020671	SBDS	100	99.200	ENSECAG00000008202	SBDS	100	99.200	Equus_caballus
ENSCCAG00000020671	SBDS	83	75.962	ENSEEUG00000004768	SBDS	100	75.962	Erinaceus_europaeus
ENSCCAG00000020671	SBDS	100	82.000	ENSELUG00000008382	sbds	100	82.000	Esox_lucius
ENSCCAG00000020671	SBDS	100	98.800	ENSFCAG00000022142	SBDS	100	98.800	Felis_catus
ENSCCAG00000020671	SBDS	100	89.200	ENSFALG00000013808	SBDS	100	89.200	Ficedula_albicollis
ENSCCAG00000020671	SBDS	100	98.000	ENSFDAG00000018947	-	100	98.000	Fukomys_damarensis
ENSCCAG00000020671	SBDS	93	85.542	ENSFHEG00000000708	sbds	100	78.313	Fundulus_heteroclitus
ENSCCAG00000020671	SBDS	100	84.000	ENSGMOG00000018356	sbds	99	84.000	Gadus_morhua
ENSCCAG00000020671	SBDS	100	89.200	ENSGALG00000027989	SBDS	100	89.200	Gallus_gallus
ENSCCAG00000020671	SBDS	92	78.261	ENSGAFG00000014204	sbds	100	78.261	Gambusia_affinis
ENSCCAG00000020671	SBDS	99	82.329	ENSGACG00000012697	sbds	100	82.329	Gasterosteus_aculeatus
ENSCCAG00000020671	SBDS	86	89.252	ENSGAGG00000022402	SBDS	100	89.252	Gopherus_agassizii
ENSCCAG00000020671	SBDS	96	79.668	ENSGGOG00000040023	-	92	79.668	Gorilla_gorilla
ENSCCAG00000020671	SBDS	93	100.000	ENSGGOG00000001472	-	87	98.851	Gorilla_gorilla
ENSCCAG00000020671	SBDS	99	83.936	ENSHBUG00000002660	sbds	100	83.936	Haplochromis_burtoni
ENSCCAG00000020671	SBDS	100	96.400	ENSHGLG00000009671	SBDS	100	96.400	Heterocephalus_glaber_female
ENSCCAG00000020671	SBDS	100	96.400	ENSHGLG00100011332	SBDS	100	96.400	Heterocephalus_glaber_male
ENSCCAG00000020671	SBDS	93	89.157	ENSHCOG00000018606	sbds	100	81.526	Hippocampus_comes
ENSCCAG00000020671	SBDS	100	85.200	ENSIPUG00000006536	sbds	100	85.200	Ictalurus_punctatus
ENSCCAG00000020671	SBDS	94	98.810	ENSSTOG00000022203	-	90	98.824	Ictidomys_tridecemlineatus
ENSCCAG00000020671	SBDS	93	91.860	ENSJJAG00000003934	-	100	70.356	Jaculus_jaculus
ENSCCAG00000020671	SBDS	93	85.542	ENSJJAG00000013791	-	100	86.667	Jaculus_jaculus
ENSCCAG00000020671	SBDS	100	94.000	ENSJJAG00000012033	-	100	94.000	Jaculus_jaculus
ENSCCAG00000020671	SBDS	93	90.361	ENSKMAG00000018542	sbds	100	83.936	Kryptolebias_marmoratus
ENSCCAG00000020671	SBDS	93	86.747	ENSLBEG00000016687	sbds	100	80.321	Labrus_bergylta
ENSCCAG00000020671	SBDS	100	70.472	ENSLACG00000018916	SBDS	100	70.472	Latimeria_chalumnae
ENSCCAG00000020671	SBDS	100	87.600	ENSLOCG00000004073	sbds	100	87.600	Lepisosteus_oculatus
ENSCCAG00000020671	SBDS	100	97.600	ENSLAFG00000008763	SBDS	100	97.600	Loxodonta_africana
ENSCCAG00000020671	SBDS	100	99.600	ENSMFAG00000032620	SBDS	100	99.600	Macaca_fascicularis
ENSCCAG00000020671	SBDS	100	99.600	ENSMMUG00000045653	SBDS	100	99.600	Macaca_mulatta
ENSCCAG00000020671	SBDS	100	99.600	ENSMNEG00000031523	SBDS	100	99.600	Macaca_nemestrina
ENSCCAG00000020671	SBDS	93	90.805	ENSMLEG00000036826	SBDS	100	74.803	Mandrillus_leucophaeus
ENSCCAG00000020671	SBDS	93	89.157	ENSMAMG00000016062	sbds	100	83.133	Mastacembelus_armatus
ENSCCAG00000020671	SBDS	99	83.936	ENSMZEG00005024385	sbds	100	83.936	Maylandia_zebra
ENSCCAG00000020671	SBDS	100	89.200	ENSMGAG00000002119	SBDS	100	89.200	Meleagris_gallopavo
ENSCCAG00000020671	SBDS	93	86.747	ENSMAUG00000022214	-	100	76.305	Mesocricetus_auratus
ENSCCAG00000020671	SBDS	94	98.810	ENSMAUG00000004862	-	91	86.408	Mesocricetus_auratus
ENSCCAG00000020671	SBDS	100	98.800	ENSMICG00000014366	SBDS	100	98.800	Microcebus_murinus
ENSCCAG00000020671	SBDS	100	97.200	ENSMOCG00000011739	Sbds	100	97.200	Microtus_ochrogaster
ENSCCAG00000020671	SBDS	93	84.337	ENSMMOG00000005061	sbds	100	73.200	Mola_mola
ENSCCAG00000020671	SBDS	100	96.400	ENSMODG00000006644	SBDS	100	96.400	Monodelphis_domestica
ENSCCAG00000020671	SBDS	93	90.361	ENSMALG00000010219	sbds	100	82.731	Monopterus_albus
ENSCCAG00000020671	SBDS	100	97.200	MGP_CAROLIEiJ_G0027800	Sbds	100	97.674	Mus_caroli
ENSCCAG00000020671	SBDS	100	96.800	ENSMUSG00000025337	Sbds	100	97.674	Mus_musculus
ENSCCAG00000020671	SBDS	100	96.800	MGP_PahariEiJ_G0024384	Sbds	100	97.674	Mus_pahari
ENSCCAG00000020671	SBDS	100	96.800	MGP_SPRETEiJ_G0028798	Sbds	100	97.674	Mus_spretus
ENSCCAG00000020671	SBDS	67	93.452	ENSMPUG00000016192	SBDS	97	93.452	Mustela_putorius_furo
ENSCCAG00000020671	SBDS	73	96.703	ENSMLUG00000013575	SBDS	100	96.703	Myotis_lucifugus
ENSCCAG00000020671	SBDS	100	97.200	ENSNGAG00000012093	Sbds	100	97.200	Nannospalax_galili
ENSCCAG00000020671	SBDS	99	83.936	ENSNBRG00000017027	sbds	100	83.936	Neolamprologus_brichardi
ENSCCAG00000020671	SBDS	100	99.600	ENSNLEG00000013288	SBDS	100	99.600	Nomascus_leucogenys
ENSCCAG00000020671	SBDS	100	95.600	ENSOPRG00000008721	SBDS	100	95.600	Ochotona_princeps
ENSCCAG00000020671	SBDS	94	98.810	ENSODEG00000015687	-	83	100.000	Octodon_degus
ENSCCAG00000020671	SBDS	99	77.108	ENSODEG00000001116	-	99	77.108	Octodon_degus
ENSCCAG00000020671	SBDS	99	72.691	ENSODEG00000000137	-	85	76.000	Octodon_degus
ENSCCAG00000020671	SBDS	100	87.600	ENSODEG00000019253	-	84	87.600	Octodon_degus
ENSCCAG00000020671	SBDS	93	89.157	ENSONIG00000005874	sbds	100	83.133	Oreochromis_niloticus
ENSCCAG00000020671	SBDS	83	92.271	ENSOANG00000007674	-	100	92.271	Ornithorhynchus_anatinus
ENSCCAG00000020671	SBDS	100	97.200	ENSOCUG00000003170	SBDS	100	97.200	Oryctolagus_cuniculus
ENSCCAG00000020671	SBDS	99	80.321	ENSORLG00000023489	sbds	100	80.321	Oryzias_latipes
ENSCCAG00000020671	SBDS	99	79.920	ENSORLG00020019282	sbds	100	79.920	Oryzias_latipes_hni
ENSCCAG00000020671	SBDS	99	79.920	ENSORLG00015008005	sbds	100	79.920	Oryzias_latipes_hsok
ENSCCAG00000020671	SBDS	99	80.723	ENSOMEG00000022747	sbds	100	80.723	Oryzias_melastigma
ENSCCAG00000020671	SBDS	100	98.000	ENSOGAG00000009011	-	100	98.000	Otolemur_garnettii
ENSCCAG00000020671	SBDS	100	81.600	ENSOGAG00000015036	-	100	81.600	Otolemur_garnettii
ENSCCAG00000020671	SBDS	100	99.200	ENSOARG00000010609	SBDS	100	99.200	Ovis_aries
ENSCCAG00000020671	SBDS	100	98.800	ENSPPAG00000043889	-	100	98.800	Pan_paniscus
ENSCCAG00000020671	SBDS	100	98.800	ENSPPRG00000002307	SBDS	100	98.800	Panthera_pardus
ENSCCAG00000020671	SBDS	100	98.800	ENSPTIG00000021308	SBDS	100	98.800	Panthera_tigris_altaica
ENSCCAG00000020671	SBDS	100	84.800	ENSPTRG00000050835	-	100	84.800	Pan_troglodytes
ENSCCAG00000020671	SBDS	100	84.400	ENSPTRG00000047744	-	100	84.400	Pan_troglodytes
ENSCCAG00000020671	SBDS	100	99.600	ENSPTRG00000019254	SBDS	100	99.600	Pan_troglodytes
ENSCCAG00000020671	SBDS	93	100.000	ENSPTRG00000048174	-	96	96.774	Pan_troglodytes
ENSCCAG00000020671	SBDS	100	99.200	ENSPANG00000004078	SBDS	100	99.200	Papio_anubis
ENSCCAG00000020671	SBDS	100	84.400	ENSPKIG00000006489	sbds	100	84.400	Paramormyrops_kingsleyae
ENSCCAG00000020671	SBDS	83	89.855	ENSPSIG00000014603	SBDS	99	89.855	Pelodiscus_sinensis
ENSCCAG00000020671	SBDS	93	89.157	ENSPMGG00000004246	sbds	100	81.928	Periophthalmus_magnuspinnatus
ENSCCAG00000020671	SBDS	100	96.800	ENSPEMG00000008728	Sbds	100	96.800	Peromyscus_maniculatus_bairdii
ENSCCAG00000020671	SBDS	100	94.800	ENSPCIG00000029718	SBDS	100	94.800	Phascolarctos_cinereus
ENSCCAG00000020671	SBDS	93	87.952	ENSPFOG00000015837	sbds	100	80.723	Poecilia_formosa
ENSCCAG00000020671	SBDS	93	87.952	ENSPLAG00000003641	sbds	100	80.723	Poecilia_latipinna
ENSCCAG00000020671	SBDS	93	87.952	ENSPMEG00000019483	sbds	100	80.723	Poecilia_mexicana
ENSCCAG00000020671	SBDS	93	87.952	ENSPREG00000018758	sbds	100	80.321	Poecilia_reticulata
ENSCCAG00000020671	SBDS	100	99.600	ENSPPYG00000017513	SBDS	100	99.600	Pongo_abelii
ENSCCAG00000020671	SBDS	100	98.400	ENSPCOG00000021098	SBDS	100	98.400	Propithecus_coquereli
ENSCCAG00000020671	SBDS	100	98.800	ENSPVAG00000009369	SBDS	100	98.800	Pteropus_vampyrus
ENSCCAG00000020671	SBDS	99	83.534	ENSPNYG00000022403	sbds	100	83.534	Pundamilia_nyererei
ENSCCAG00000020671	SBDS	100	85.200	ENSPNAG00000001120	sbds	100	85.200	Pygocentrus_nattereri
ENSCCAG00000020671	SBDS	100	96.800	ENSRNOG00000000888	Sbds	100	96.800	Rattus_norvegicus
ENSCCAG00000020671	SBDS	91	82.716	ENSRBIG00000041549	-	63	82.716	Rhinopithecus_bieti
ENSCCAG00000020671	SBDS	100	99.600	ENSRBIG00000035557	SBDS	100	99.600	Rhinopithecus_bieti
ENSCCAG00000020671	SBDS	93	92.771	ENSRROG00000041986	-	100	79.600	Rhinopithecus_roxellana
ENSCCAG00000020671	SBDS	100	99.600	ENSRROG00000040842	-	100	99.600	Rhinopithecus_roxellana
ENSCCAG00000020671	SBDS	94	60.714	YLR022C	-	96	43.320	Saccharomyces_cerevisiae
ENSCCAG00000020671	SBDS	93	98.707	ENSSBOG00000022460	SBDS	100	98.707	Saimiri_boliviensis_boliviensis
ENSCCAG00000020671	SBDS	100	82.800	ENSSHAG00000010263	SBDS	100	82.800	Sarcophilus_harrisii
ENSCCAG00000020671	SBDS	100	85.600	ENSSFOG00015001108	sbds	100	85.600	Scleropages_formosus
ENSCCAG00000020671	SBDS	99	83.534	ENSSMAG00000020506	sbds	100	83.534	Scophthalmus_maximus
ENSCCAG00000020671	SBDS	93	89.157	ENSSDUG00000001528	sbds	100	82.731	Seriola_dumerili
ENSCCAG00000020671	SBDS	93	89.157	ENSSLDG00000003659	sbds	100	82.731	Seriola_lalandi_dorsalis
ENSCCAG00000020671	SBDS	93	98.795	ENSSARG00000013132	-	100	98.039	Sorex_araneus
ENSCCAG00000020671	SBDS	93	98.795	ENSSARG00000001899	-	73	98.837	Sorex_araneus
ENSCCAG00000020671	SBDS	100	86.800	ENSSPUG00000002699	SBDS	100	86.800	Sphenodon_punctatus
ENSCCAG00000020671	SBDS	93	89.157	ENSSPAG00000016419	sbds	100	75.600	Stegastes_partitus
ENSCCAG00000020671	SBDS	100	98.800	ENSSSCG00000007732	SBDS	100	98.800	Sus_scrofa
ENSCCAG00000020671	SBDS	66	89.091	ENSTGUG00000003426	SBDS	99	89.091	Taeniopygia_guttata
ENSCCAG00000020671	SBDS	93	89.157	ENSTRUG00000021443	sbds	100	82.731	Takifugu_rubripes
ENSCCAG00000020671	SBDS	99	81.928	ENSTNIG00000019000	sbds	100	81.928	Tetraodon_nigroviridis
ENSCCAG00000020671	SBDS	93	97.590	ENSTBEG00000001178	SBDS	100	83.654	Tupaia_belangeri
ENSCCAG00000020671	SBDS	93	100.000	ENSTTRG00000003921	SBDS	100	78.800	Tursiops_truncatus
ENSCCAG00000020671	SBDS	100	98.400	ENSUAMG00000001326	SBDS	100	98.400	Ursus_americanus
ENSCCAG00000020671	SBDS	100	98.400	ENSUMAG00000015353	SBDS	100	98.400	Ursus_maritimus
ENSCCAG00000020671	SBDS	100	98.800	ENSVVUG00000016478	SBDS	100	98.800	Vulpes_vulpes
ENSCCAG00000020671	SBDS	100	86.400	ENSXETG00000010093	sbds	100	86.400	Xenopus_tropicalis
ENSCCAG00000020671	SBDS	93	87.952	ENSXCOG00000010639	sbds	100	73.494	Xiphophorus_couchianus
ENSCCAG00000020671	SBDS	93	87.952	ENSXMAG00000006065	sbds	100	81.124	Xiphophorus_maculatus