EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCCAG00000020938 (Gene tree)
Gene ID
108306573
Gene Symbol
-
Alias
-
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Cebus_capucinus
Status
putative
Strand
Minus strand
Length
30401 bases
Position
chrKV389498.1:6740445-6770845
Accession
108306573
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCCAP00000006513RNA_pol_Rpb1_5PF04998.171e-10011
ENSCCAP00000006487RNA_pol_Rpb1_5PF04998.171.1e-10011
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-32140
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-32240
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-32340
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-32440
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-32540
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-32640
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-32740
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-32840
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-32940
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-321040
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-321140
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-321240
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-321340
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-321440
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-321540
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-321640
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-321740
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-321840
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-321940
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-322040
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-322140
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-322240
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-322340
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-322440
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-322540
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-322640
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-322740
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-322840
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-322940
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-323040
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-323140
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-323240
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-323340
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-323440
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-323540
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-323640
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-323740
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-323840
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-323940
ENSCCAP00000006513RNA_pol_Rpb1_RPF05001.137e-324040
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-27140
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-27240
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-27340
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-27440
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-27540
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-27640
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-27740
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-27840
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-27940
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-271040
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-271140
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-271240
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-271340
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-271440
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-271540
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-271640
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-271740
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-271840
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-271940
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-272040
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-272140
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-272240
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-272340
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-272440
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-272540
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-272640
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-272740
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-272840
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-272940
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-273040
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-273140
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-273240
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-273340
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-273440
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-273540
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-273640
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-273740
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-273840
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-273940
ENSCCAP00000006487RNA_pol_Rpb1_RPF05001.135.7e-274040
ENSCCAP00000006513RNA_pol_Rpb1_4PF05000.175.8e-3811
ENSCCAP00000006487RNA_pol_Rpb1_4PF05000.176e-3811
ENSCCAP00000006513RNA_pol_Rpb1_2PF00623.201.8e-7411
ENSCCAP00000006487RNA_pol_Rpb1_2PF00623.201.9e-7411
ENSCCAP00000006513RNA_pol_Rpb1_3PF04983.181.4e-4911
ENSCCAP00000006487RNA_pol_Rpb1_3PF04983.181.4e-4911
ENSCCAP00000006513RNA_pol_Rpb1_1PF04997.128.8e-10911
ENSCCAP00000006487RNA_pol_Rpb1_1PF04997.129.1e-10911
ENSCCAP00000006513RNA_pol_Rpb1_7PF04990.123.3e-5411
ENSCCAP00000006487RNA_pol_Rpb1_7PF04990.123.4e-5411
ENSCCAP00000006513RNA_pol_Rpb1_6PF04992.142.3e-6711
ENSCCAP00000006487RNA_pol_Rpb1_6PF04992.142.4e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCCAT00000023854-6891XM_017531615ENSCCAP000000064871970 (aa)XP_017387104A0A2K5PS73
ENSCCAT00000023879-5799-ENSCCAP000000065131932 (aa)-A0A2K5PS75
Gene Model
Click here to download ENSCCAG00000020938's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000020938's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCCAG00000020938-7138.589ENSCCAG00000032995POLR3A9638.445
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCCAG00000020938-8294.482ENSAPOG00000006552polr2a9194.475Acanthochromis_polyacanthus
ENSCCAG00000020938-10099.696ENSAMEG00000016265-10099.696Ailuropoda_melanoleuca
ENSCCAG00000020938-8294.794ENSACIG00000015982polr2a8194.787Amphilophus_citrinellus
ENSCCAG00000020938-9794.730ENSAOCG00000004255polr2a9694.723Amphiprion_ocellaris
ENSCCAG00000020938-8294.730ENSAPEG00000012623polr2a8294.538Amphiprion_percula
ENSCCAG00000020938-8294.603ENSATEG00000019644polr2a8294.413Anabas_testudineus
ENSCCAG00000020938-10098.426ENSACAG00000014561POLR2A10098.426Anolis_carolinensis
ENSCCAG00000020938-100100.000ENSANAG00000020093-100100.000Aotus_nancymaae
ENSCCAG00000020938-8294.413ENSACLG00000006735polr2a8294.227Astatotilapia_calliptera
ENSCCAG00000020938-8294.857ENSAMXG00000020046polr2a8294.786Astyanax_mexicanus
ENSCCAG00000020938-10099.949ENSBTAG00000046765POLR2A10099.949Bos_taurus
ENSCCAG00000020938-9470.025WBGene00000123ama-19972.727Caenorhabditis_elegans
ENSCCAG00000020938-10099.543ENSCAFG00000016532POLR2A10099.721Canis_familiaris
ENSCCAG00000020938-10099.275ENSCAFG00020007929-10099.275Canis_lupus_dingo
ENSCCAG00000020938-10099.949ENSCHIG00000027173-10099.949Capra_hircus
ENSCCAG00000020938-100100.000ENSTSYG00000012803-100100.000Carlito_syrichta
ENSCCAG00000020938-9895.609ENSCAPG00000001882-9898.543Cavia_aperea
ENSCCAG00000020938-10095.683ENSCPOG00000014812-9998.537Cavia_porcellus
ENSCCAG00000020938-10099.949ENSCATG00000013680-10099.949Cercocebus_atys
ENSCCAG00000020938-10099.848ENSCLAG00000012196-10099.848Chinchilla_lanigera
ENSCCAG00000020938-10090.455ENSCSAG00000011644-8290.746Chlorocebus_sabaeus
ENSCCAG00000020938-10093.959ENSCPBG00000012697POLR2A10093.959Chrysemys_picta_bellii
ENSCCAG00000020938-9976.428ENSCING00000007884-9976.689Ciona_intestinalis
ENSCCAG00000020938-9583.333ENSCSAVG00000008334-9983.871Ciona_savignyi
ENSCCAG00000020938-10099.289ENSCANG00000010622-10099.289Colobus_angolensis_palliatus
ENSCCAG00000020938-10095.600ENSCGRG00001003538Polr2a10095.600Cricetulus_griseus_chok1gshd
ENSCCAG00000020938-9695.493ENSCGRG00000012105Polr2a9995.747Cricetulus_griseus_crigri
ENSCCAG00000020938-8293.968ENSCSEG00000002635polr2a8293.961Cynoglossus_semilaevis
ENSCCAG00000020938-8294.668ENSCVAG00000005156polr2a8294.662Cyprinodon_variegatus
ENSCCAG00000020938-8294.486ENSDARG00000099966polr2a8294.479Danio_rerio
ENSCCAG00000020938-10097.005ENSDNOG00000016482-10097.005Dasypus_novemcinctus
ENSCCAG00000020938-100100.000ENSDORG00000008667Polr2a100100.000Dipodomys_ordii
ENSCCAG00000020938-9969.995FBgn0003277RpII2159974.828Drosophila_melanogaster
ENSCCAG00000020938-9488.097ENSETEG00000002540-8792.796Echinops_telfairi
ENSCCAG00000020938-8188.022ENSEBUG00000013967polr2a8287.430Eptatretus_burgeri
ENSCCAG00000020938-10096.954ENSEASG00005019114-10097.056Equus_asinus_asinus
ENSCCAG00000020938-10099.949ENSECAG00000018485POLR2A10099.949Equus_caballus
ENSCCAG00000020938-8899.800ENSEEUG00000001154-9599.800Erinaceus_europaeus
ENSCCAG00000020938-8892.875ENSELUG00000014284polr2a8492.866Esox_lucius
ENSCCAG00000020938-10099.949ENSFDAG00000008287-10099.949Fukomys_damarensis
ENSCCAG00000020938-9192.498ENSFHEG00000001768polr2a9894.662Fundulus_heteroclitus
ENSCCAG00000020938-9990.361ENSGMOG00000007725polr2a100100.000Gadus_morhua
ENSCCAG00000020938-10094.366ENSGAFG00000005389polr2a9992.427Gambusia_affinis
ENSCCAG00000020938-9990.750ENSGACG00000019366polr2a10088.249Gasterosteus_aculeatus
ENSCCAG00000020938-10098.176ENSGGOG00000014800-10098.176Gorilla_gorilla
ENSCCAG00000020938-9192.126ENSHBUG00000018937polr2a9994.227Haplochromis_burtoni
ENSCCAG00000020938-10099.949ENSHGLG00000012381POLR2A10099.949Heterocephalus_glaber_female
ENSCCAG00000020938-10099.949ENSHGLG00100014843POLR2A10099.949Heterocephalus_glaber_male
ENSCCAG00000020938-8293.924ENSHCOG00000011874polr2a8293.917Hippocampus_comes
ENSCCAG00000020938-8294.222ENSIPUG00000002613Polr2a8294.165Ictalurus_punctatus
ENSCCAG00000020938-100100.000ENSSTOG00000001304-100100.000Ictidomys_tridecemlineatus
ENSCCAG00000020938-10099.898ENSJJAG00000013049Polr2a10099.898Jaculus_jaculus
ENSCCAG00000020938-8085.355ENSKMAG00000016343polr2a8585.418Kryptolebias_marmoratus
ENSCCAG00000020938-8294.349ENSLBEG00000027652polr2a8294.342Labrus_bergylta
ENSCCAG00000020938-8087.097ENSLACG00000012071POLR2A8187.152Latimeria_chalumnae
ENSCCAG00000020938-9194.840ENSLOCG00000013863polr2a9994.534Lepisosteus_oculatus
ENSCCAG00000020938-10099.949ENSLAFG00000008626-10099.949Loxodonta_africana
ENSCCAG00000020938-5198.366ENSMFAG00000007042-9998.366Macaca_fascicularis
ENSCCAG00000020938-10099.949ENSMMUG00000023620-10099.949Macaca_mulatta
ENSCCAG00000020938-10099.241ENSMNEG00000040407-10099.241Macaca_nemestrina
ENSCCAG00000020938-9995.023ENSMLEG00000030263-9998.366Mandrillus_leucophaeus
ENSCCAG00000020938-8294.296ENSMAMG00000003351polr2a8294.289Mastacembelus_armatus
ENSCCAG00000020938-8294.234ENSMZEG00005021429polr2a8294.227Maylandia_zebra
ENSCCAG00000020938-51100.000ENSMAUG00000021055-99100.000Mesocricetus_auratus
ENSCCAG00000020938-10099.898ENSMICG00000013372-10099.898Microcebus_murinus
ENSCCAG00000020938-10095.512ENSMOCG00000018279Polr2a10095.058Microtus_ochrogaster
ENSCCAG00000020938-8793.800ENSMMOG00000012515polr2a9593.793Mola_mola
ENSCCAG00000020938-10099.543ENSMODG00000007009-10099.543Monodelphis_domestica
ENSCCAG00000020938-9491.708ENSMALG00000008716polr2a9994.660Monopterus_albus
ENSCCAG00000020938-10099.949MGP_CAROLIEiJ_G0016587Polr2a10099.949Mus_caroli
ENSCCAG00000020938-10099.949ENSMUSG00000005198Polr2a10099.949Mus_musculus
ENSCCAG00000020938-10098.179MGP_PahariEiJ_G0017718Polr2a10098.179Mus_pahari
ENSCCAG00000020938-10099.949MGP_SPRETEiJ_G0017423Polr2a10099.949Mus_spretus
ENSCCAG00000020938-10099.898ENSMPUG00000009648-10099.898Mustela_putorius_furo
ENSCCAG00000020938-10099.493ENSMLUG00000009088-10099.493Myotis_lucifugus
ENSCCAG00000020938-100100.000ENSNGAG00000002543Polr2a100100.000Nannospalax_galili
ENSCCAG00000020938-8294.476ENSNBRG00000002005polr2a8194.469Neolamprologus_brichardi
ENSCCAG00000020938-100100.000ENSNLEG00000009460-100100.000Nomascus_leucogenys
ENSCCAG00000020938-9499.455ENSMEUG00000008611-9399.455Notamacropus_eugenii
ENSCCAG00000020938-8099.747ENSOPRG00000015116-9999.747Ochotona_princeps
ENSCCAG00000020938-10097.050ENSODEG00000017674-10096.843Octodon_degus
ENSCCAG00000020938-8294.420ENSONIG00000009231polr2a8294.413Oreochromis_niloticus
ENSCCAG00000020938-10097.412ENSOCUG00000017929-10097.768Oryctolagus_cuniculus
ENSCCAG00000020938-8294.413ENSORLG00000006431polr2a8294.289Oryzias_latipes
ENSCCAG00000020938-8294.413ENSORLG00020010235polr2a8294.289Oryzias_latipes_hni
ENSCCAG00000020938-8294.413ENSORLG00015007075polr2a8294.289Oryzias_latipes_hsok
ENSCCAG00000020938-9294.406ENSOMEG00000010713polr2a10094.406Oryzias_melastigma
ENSCCAG00000020938-10099.848ENSOGAG00000033608-10099.848Otolemur_garnettii
ENSCCAG00000020938-9899.788ENSOARG00000013874-10099.788Ovis_aries
ENSCCAG00000020938-10099.379ENSPPAG00000043734-10099.379Pan_paniscus
ENSCCAG00000020938-100100.000ENSPTRG00000008691POLR2A100100.000Pan_troglodytes
ENSCCAG00000020938-10099.289ENSPANG00000024099-10099.289Papio_anubis
ENSCCAG00000020938-7792.793ENSPKIG00000005727polr2a8582.000Paramormyrops_kingsleyae
ENSCCAG00000020938-9896.478ENSPSIG00000014006POLR2A10096.478Pelodiscus_sinensis
ENSCCAG00000020938-10094.279ENSPMGG00000019734polr2a9994.787Periophthalmus_magnuspinnatus
ENSCCAG00000020938-100100.000ENSPEMG00000012521Polr2a100100.000Peromyscus_maniculatus_bairdii
ENSCCAG00000020938-9687.310ENSPCIG00000028851-9687.310Phascolarctos_cinereus
ENSCCAG00000020938-9192.436ENSPFOG00000007890polr2a9994.600Poecilia_formosa
ENSCCAG00000020938-9192.436ENSPLAG00000007399polr2a9994.600Poecilia_latipinna
ENSCCAG00000020938-9192.436ENSPMEG00000002071polr2a9994.723Poecilia_mexicana
ENSCCAG00000020938-8294.667ENSPREG00000013122polr2a8294.538Poecilia_reticulata
ENSCCAG00000020938-10096.805ENSPPYG00000007924-10098.935Pongo_abelii
ENSCCAG00000020938-9299.868ENSPCAG00000006951-9299.868Procavia_capensis
ENSCCAG00000020938-10099.948ENSPCOG00000025260-10099.948Propithecus_coquereli
ENSCCAG00000020938-10099.746ENSPVAG00000005069-10099.746Pteropus_vampyrus
ENSCCAG00000020938-8394.499ENSPNYG00000022340polr2a8294.289Pundamilia_nyererei
ENSCCAG00000020938-8294.606ENSPNAG00000011237polr2a8294.600Pygocentrus_nattereri
ENSCCAG00000020938-10099.898ENSRNOG00000028834Polr2a10099.898Rattus_norvegicus
ENSCCAG00000020938-10096.537ENSRBIG00000002471-10098.499Rhinopithecus_bieti
ENSCCAG00000020938-10099.594ENSRROG00000029583-10099.594Rhinopithecus_roxellana
ENSCCAG00000020938-8488.000YDL140CRPO219980.180Saccharomyces_cerevisiae
ENSCCAG00000020938-100100.000ENSSBOG00000000808-100100.000Saimiri_boliviensis_boliviensis
ENSCCAG00000020938-10095.515ENSSHAG00000002858-10094.619Sarcophilus_harrisii
ENSCCAG00000020938-8294.667ENSSFOG00015023275polr2a8294.538Scleropages_formosus
ENSCCAG00000020938-8293.924ENSSMAG00000009137polr2a8293.917Scophthalmus_maximus
ENSCCAG00000020938-8294.603ENSSDUG00000020466polr2a8294.413Seriola_dumerili
ENSCCAG00000020938-8294.603ENSSLDG00000020613polr2a8294.413Seriola_lalandi_dorsalis
ENSCCAG00000020938-9795.036ENSSARG00000005875-9995.036Sorex_araneus
ENSCCAG00000020938-10094.482ENSSPAG00000016741polr2a9494.475Stegastes_partitus
ENSCCAG00000020938-10099.239ENSSSCG00000028278-10099.239Sus_scrofa
ENSCCAG00000020938-9988.600ENSTRUG00000012320polr2a8188.586Takifugu_rubripes
ENSCCAG00000020938-9992.932ENSTNIG00000010136polr2a10092.924Tetraodon_nigroviridis
ENSCCAG00000020938-76100.000ENSTBEG00000013294-58100.000Tupaia_belangeri
ENSCCAG00000020938-10098.426ENSTTRG00000014273-10098.426Tursiops_truncatus
ENSCCAG00000020938-9696.904ENSUAMG00000014866-10099.567Ursus_americanus
ENSCCAG00000020938-9997.386ENSUMAG00000015732-10097.386Ursus_maritimus
ENSCCAG00000020938-65100.000ENSVPAG00000008842-76100.000Vicugna_pacos
ENSCCAG00000020938-10096.604ENSVVUG00000027878-10098.528Vulpes_vulpes
ENSCCAG00000020938-9996.971ENSXETG00000012465polr2a10096.971Xenopus_tropicalis
ENSCCAG00000020938-9394.667ENSXCOG00000001804polr2a9494.660Xiphophorus_couchianus
ENSCCAG00000020938-8294.667ENSXMAG00000015687polr2a8294.538Xiphophorus_maculatus

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