EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000021040 (Gene tree)
Gene ID: 108304743
Gene Symbol: -
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 10194 bases
Position: chrKV389483.1:173770-183963
Accession: 108304743
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000006569	RRM_1	PF00076.22	4.7e-58	1	4
ENSCCAP00000006569	RRM_1	PF00076.22	4.7e-58	2	4
ENSCCAP00000006569	RRM_1	PF00076.22	4.7e-58	3	4
ENSCCAP00000006569	RRM_1	PF00076.22	4.7e-58	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000023935	-	2806	XM_017529036	ENSCCAP00000006569	708 (aa)	XP_017384525	A0A2K5PSF5

Gene Model

Click here to download ENSCCAG00000021040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000021040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000021040	-	54	89.447	ENSCCAG00000000551	-	76	89.552

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000021040	-	92	92.638	ENSG00000115053	NCL	100	96.454	Homo_sapiens
ENSCCAG00000021040	-	62	94.533	ENSAMEG00000016289	NCL	53	96.570	Ailuropoda_melanoleuca
ENSCCAG00000021040	-	100	72.817	ENSANAG00000024378	-	85	87.121	Aotus_nancymaae
ENSCCAG00000021040	-	100	97.472	ENSANAG00000035814	-	100	97.472	Aotus_nancymaae
ENSCCAG00000021040	-	64	91.250	ENSBTAG00000026909	-	85	91.632	Bos_taurus
ENSCCAG00000021040	-	94	84.875	ENSBTAG00000016174	NCL	54	96.570	Bos_taurus
ENSCCAG00000021040	-	89	92.157	ENSBTAG00000051320	-	73	90.141	Bos_taurus
ENSCCAG00000021040	-	92	90.164	ENSBTAG00000050728	-	81	90.164	Bos_taurus
ENSCCAG00000021040	-	92	91.437	ENSCJAG00000013538	NCL	100	95.531	Callithrix_jacchus
ENSCCAG00000021040	-	100	87.552	ENSCAFG00000011037	NCL	53	97.098	Canis_familiaris
ENSCCAG00000021040	-	93	87.160	ENSCAFG00020023145	NCL	56	97.098	Canis_lupus_dingo
ENSCCAG00000021040	-	85	85.714	ENSCHIG00000010894	-	57	96.306	Capra_hircus
ENSCCAG00000021040	-	92	63.328	ENSCHIG00000012143	-	60	81.003	Capra_hircus
ENSCCAG00000021040	-	92	79.237	ENSCHIG00000026149	-	53	89.182	Capra_hircus
ENSCCAG00000021040	-	74	96.460	ENSCHIG00000021052	-	66	93.007	Capra_hircus
ENSCCAG00000021040	-	90	74.843	ENSTSYG00000036886	-	61	85.185	Carlito_syrichta
ENSCCAG00000021040	-	92	89.482	ENSTSYG00000004355	-	92	88.567	Carlito_syrichta
ENSCCAG00000021040	-	95	87.391	ENSTSYG00000029779	-	98	87.457	Carlito_syrichta
ENSCCAG00000021040	-	62	87.927	ENSCAPG00000009405	NCL	52	88.918	Cavia_aperea
ENSCCAG00000021040	-	62	92.483	ENSCPOG00000001034	NCL	53	94.195	Cavia_porcellus
ENSCCAG00000021040	-	100	92.006	ENSCATG00000037033	NCL	53	99.472	Cercocebus_atys
ENSCCAG00000021040	-	100	83.634	ENSCLAG00000013080	NCL	53	94.987	Chinchilla_lanigera
ENSCCAG00000021040	-	62	98.866	ENSCSAG00000006660	NCL	95	98.866	Chlorocebus_sabaeus
ENSCCAG00000021040	-	62	75.571	ENSCHOG00000012860	NCL	78	80.159	Choloepus_hoffmanni
ENSCCAG00000021040	-	76	100.000	ENSCANG00000036756	NCL	94	100.000	Colobus_angolensis_palliatus
ENSCCAG00000021040	-	92	81.860	ENSCGRG00001024315	-	53	89.182	Cricetulus_griseus_chok1gshd
ENSCCAG00000021040	-	85	81.789	ENSCGRG00000017894	-	54	89.182	Cricetulus_griseus_crigri
ENSCCAG00000021040	-	100	85.754	ENSDNOG00000010783	-	53	93.963	Dasypus_novemcinctus
ENSCCAG00000021040	-	92	77.523	ENSDNOG00000046347	-	54	84.514	Dasypus_novemcinctus
ENSCCAG00000021040	-	54	84.169	ENSDORG00000012513	-	54	84.169	Dipodomys_ordii
ENSCCAG00000021040	-	52	74.044	ENSDORG00000023596	-	52	73.046	Dipodomys_ordii
ENSCCAG00000021040	-	54	90.789	ENSETEG00000018937	-	53	90.765	Echinops_telfairi
ENSCCAG00000021040	-	53	90.451	ENSETEG00000014756	-	86	90.501	Echinops_telfairi
ENSCCAG00000021040	-	62	61.937	ENSETEG00000008553	-	80	65.000	Echinops_telfairi
ENSCCAG00000021040	-	53	66.310	ENSETEG00000008139	-	64	66.396	Echinops_telfairi
ENSCCAG00000021040	-	98	85.328	ENSEASG00005008488	NCL	96	94.643	Equus_asinus_asinus
ENSCCAG00000021040	-	100	85.933	ENSECAG00000021868	NCL	53	96.306	Equus_caballus
ENSCCAG00000021040	-	85	80.661	ENSEEUG00000005913	NCL	54	91.293	Erinaceus_europaeus
ENSCCAG00000021040	-	100	88.408	ENSFCAG00000027622	NCL	53	97.098	Felis_catus
ENSCCAG00000021040	-	99	86.197	ENSFDAG00000014291	NCL	54	94.987	Fukomys_damarensis
ENSCCAG00000021040	-	100	91.737	ENSGGOG00000004300	NCL	81	87.699	Gorilla_gorilla
ENSCCAG00000021040	-	91	77.743	ENSHGLG00000011069	-	55	86.772	Heterocephalus_glaber_female
ENSCCAG00000021040	-	100	86.014	ENSHGLG00000002031	-	59	90.071	Heterocephalus_glaber_female
ENSCCAG00000021040	-	56	84.091	ENSHGLG00000005133	-	82	84.071	Heterocephalus_glaber_female
ENSCCAG00000021040	-	54	94.723	ENSHGLG00100014537	-	54	94.723	Heterocephalus_glaber_male
ENSCCAG00000021040	-	53	85.600	ENSHGLG00100000745	-	59	85.676	Heterocephalus_glaber_male
ENSCCAG00000021040	-	54	82.586	ENSJJAG00000016165	Ncl	91	76.791	Jaculus_jaculus
ENSCCAG00000021040	-	100	95.670	ENSMFAG00000040385	NCL	100	95.670	Macaca_fascicularis
ENSCCAG00000021040	-	100	95.670	ENSMMUG00000018094	NCL	100	95.670	Macaca_mulatta
ENSCCAG00000021040	-	100	93.820	ENSMNEG00000023839	NCL	100	93.820	Macaca_nemestrina
ENSCCAG00000021040	-	100	95.798	ENSMLEG00000028935	NCL	100	95.798	Mandrillus_leucophaeus
ENSCCAG00000021040	-	100	89.326	ENSMICG00000002538	-	53	97.361	Microcebus_murinus
ENSCCAG00000021040	-	92	73.652	ENSMICG00000029975	-	86	80.851	Microcebus_murinus
ENSCCAG00000021040	-	92	77.439	MGP_CAROLIEiJ_G0014362	Ncl	53	86.807	Mus_caroli
ENSCCAG00000021040	-	92	77.896	ENSMUSG00000026234	Ncl	53	86.807	Mus_musculus
ENSCCAG00000021040	-	92	77.356	MGP_PahariEiJ_G0027599	Ncl	53	86.807	Mus_pahari
ENSCCAG00000021040	-	92	77.778	MGP_SPRETEiJ_G0015164	Ncl	53	86.807	Mus_spretus
ENSCCAG00000021040	-	92	85.258	ENSMLUG00000014547	NCL	53	97.098	Myotis_lucifugus
ENSCCAG00000021040	-	92	80.241	ENSNGAG00000002454	-	53	90.237	Nannospalax_galili
ENSCCAG00000021040	-	54	72.559	ENSNGAG00000006188	-	54	72.559	Nannospalax_galili
ENSCCAG00000021040	-	94	80.847	ENSNLEG00000014107	-	95	80.996	Nomascus_leucogenys
ENSCCAG00000021040	-	92	85.593	ENSODEG00000002441	-	89	85.593	Octodon_degus
ENSCCAG00000021040	-	53	90.451	ENSODEG00000003281	-	53	90.476	Octodon_degus
ENSCCAG00000021040	-	53	90.451	ENSODEG00000002748	-	59	90.476	Octodon_degus
ENSCCAG00000021040	-	54	94.474	ENSOCUG00000004312	NCL	67	92.711	Oryctolagus_cuniculus
ENSCCAG00000021040	-	74	88.127	ENSOGAG00000027852	NCL	77	88.127	Otolemur_garnettii
ENSCCAG00000021040	-	91	82.137	ENSOARG00000020709	-	56	95.288	Ovis_aries
ENSCCAG00000021040	-	70	88.155	ENSOARG00000013710	-	64	94.195	Ovis_aries
ENSCCAG00000021040	-	88	86.458	ENSOARG00000013270	-	53	90.110	Ovis_aries
ENSCCAG00000021040	-	55	79.016	ENSOARG00000004072	-	61	79.420	Ovis_aries
ENSCCAG00000021040	-	92	92.945	ENSPPAG00000011619	NCL	63	90.228	Pan_paniscus
ENSCCAG00000021040	-	100	88.392	ENSPPRG00000012603	NCL	53	96.834	Panthera_pardus
ENSCCAG00000021040	-	99	88.152	ENSPTIG00000010393	NCL	53	96.834	Panthera_tigris_altaica
ENSCCAG00000021040	-	100	92.308	ENSPTRG00000013025	NCL	81	87.699	Pan_troglodytes
ENSCCAG00000021040	-	100	95.670	ENSPANG00000010292	NCL	100	95.670	Papio_anubis
ENSCCAG00000021040	-	100	85.056	ENSPPYG00000013265	NCL	53	87.467	Pongo_abelii
ENSCCAG00000021040	-	91	84.651	ENSPCOG00000004160	-	86	90.476	Propithecus_coquereli
ENSCCAG00000021040	-	92	90.534	ENSPCOG00000003051	-	60	93.632	Propithecus_coquereli
ENSCCAG00000021040	-	100	88.827	ENSPVAG00000000297	NCL	53	97.361	Pteropus_vampyrus
ENSCCAG00000021040	-	92	79.331	ENSRNOG00000018273	Ncl	53	88.654	Rattus_norvegicus
ENSCCAG00000021040	-	92	88.000	ENSRBIG00000037525	-	54	96.834	Rhinopithecus_bieti
ENSCCAG00000021040	-	71	98.773	ENSRBIG00000035396	-	86	98.773	Rhinopithecus_bieti
ENSCCAG00000021040	-	91	99.429	ENSRROG00000036103	-	54	98.198	Rhinopithecus_roxellana
ENSCCAG00000021040	-	92	92.813	ENSRROG00000028756	-	59	99.644	Rhinopithecus_roxellana
ENSCCAG00000021040	-	100	96.508	ENSSBOG00000029193	-	100	96.508	Saimiri_boliviensis_boliviensis
ENSCCAG00000021040	-	55	75.342	ENSSBOG00000023094	-	76	75.566	Saimiri_boliviensis_boliviensis
ENSCCAG00000021040	-	100	84.746	ENSSBOG00000027549	-	97	88.838	Saimiri_boliviensis_boliviensis
ENSCCAG00000021040	-	54	96.042	ENSSSCG00000016275	NCL	52	96.042	Sus_scrofa
ENSCCAG00000021040	-	74	77.317	ENSTBEG00000002469	-	66	82.286	Tupaia_belangeri
ENSCCAG00000021040	-	56	84.433	ENSTBEG00000001546	-	85	80.992	Tupaia_belangeri
ENSCCAG00000021040	-	92	88.190	ENSTTRG00000009094	NCL	53	95.503	Tursiops_truncatus
ENSCCAG00000021040	-	54	96.570	ENSUAMG00000005639	NCL	87	94.533	Ursus_americanus
ENSCCAG00000021040	-	62	94.533	ENSUMAG00000015789	NCL	53	96.570	Ursus_maritimus
ENSCCAG00000021040	-	69	88.028	ENSVPAG00000001796	NCL	69	88.028	Vicugna_pacos
ENSCCAG00000021040	-	100	85.835	ENSVVUG00000025564	NCL	64	94.533	Vulpes_vulpes