EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000021299 (Gene tree)
Gene ID: 108302489
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 74223 bases
Position: chrKV389467.1:2589191-2663413
Accession: 108302489
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000007265	Npa1	PF11707.8	4.3e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000024636	URB1-201	6810	XM_017526090	ENSCCAP00000007265	2269 (aa)	XP_017381579	A0A2K5PUF0

Gene Model

Click here to download ENSCCAG00000021299's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000021299's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000021299	URB1	99	93.722	ENSG00000142207	URB1	100	93.659	Homo_sapiens
ENSCCAG00000021299	URB1	99	43.539	ENSAPOG00000020308	urb1	99	43.758	Acanthochromis_polyacanthus
ENSCCAG00000021299	URB1	100	82.042	ENSAMEG00000011998	URB1	99	81.998	Ailuropoda_melanoleuca
ENSCCAG00000021299	URB1	94	45.012	ENSACIG00000003248	urb1	96	45.012	Amphilophus_citrinellus
ENSCCAG00000021299	URB1	99	41.002	ENSAOCG00000010364	urb1	99	41.089	Amphiprion_ocellaris
ENSCCAG00000021299	URB1	97	53.102	ENSAPEG00000010758	urb1	99	53.102	Amphiprion_percula
ENSCCAG00000021299	URB1	99	43.721	ENSATEG00000011790	urb1	96	44.558	Anabas_testudineus
ENSCCAG00000021299	URB1	97	56.537	ENSAPLG00000012791	URB1	100	56.628	Anas_platyrhynchos
ENSCCAG00000021299	URB1	99	53.843	ENSACAG00000002817	URB1	98	53.789	Anolis_carolinensis
ENSCCAG00000021299	URB1	100	96.127	ENSANAG00000024617	URB1	100	96.127	Aotus_nancymaae
ENSCCAG00000021299	URB1	99	45.134	ENSACLG00000024865	urb1	99	44.938	Astatotilapia_calliptera
ENSCCAG00000021299	URB1	99	39.798	ENSAMXG00000012306	urb1	99	39.929	Astyanax_mexicanus
ENSCCAG00000021299	URB1	99	77.817	ENSBTAG00000012412	URB1	99	77.773	Bos_taurus
ENSCCAG00000021299	URB1	100	94.945	ENSCJAG00000009118	URB1	100	94.945	Callithrix_jacchus
ENSCCAG00000021299	URB1	100	82.046	ENSCAFG00000008892	URB1	100	82.002	Canis_familiaris
ENSCCAG00000021299	URB1	100	81.866	ENSCAFG00020025987	-	100	81.866	Canis_lupus_dingo
ENSCCAG00000021299	URB1	100	80.942	ENSCAFG00020025994	-	100	80.942	Canis_lupus_dingo
ENSCCAG00000021299	URB1	99	77.203	ENSCHIG00000015645	URB1	99	77.159	Capra_hircus
ENSCCAG00000021299	URB1	100	86.104	ENSTSYG00000013286	URB1	99	86.104	Carlito_syrichta
ENSCCAG00000021299	URB1	98	79.442	ENSCAPG00000015589	URB1	99	79.442	Cavia_aperea
ENSCCAG00000021299	URB1	99	80.722	ENSCPOG00000006748	URB1	99	80.722	Cavia_porcellus
ENSCCAG00000021299	URB1	100	93.351	ENSCATG00000042630	URB1	100	93.351	Cercocebus_atys
ENSCCAG00000021299	URB1	100	80.352	ENSCLAG00000005262	URB1	100	80.352	Chinchilla_lanigera
ENSCCAG00000021299	URB1	100	91.583	ENSCSAG00000009584	URB1	100	91.583	Chlorocebus_sabaeus
ENSCCAG00000021299	URB1	99	59.423	ENSCPBG00000006454	URB1	99	59.371	Chrysemys_picta_bellii
ENSCCAG00000021299	URB1	100	93.527	ENSCANG00000031088	URB1	100	93.527	Colobus_angolensis_palliatus
ENSCCAG00000021299	URB1	99	76.549	ENSCGRG00001010616	Urb1	99	76.320	Cricetulus_griseus_chok1gshd
ENSCCAG00000021299	URB1	98	76.283	ENSCGRG00000015840	Urb1	99	76.283	Cricetulus_griseus_crigri
ENSCCAG00000021299	URB1	99	42.323	ENSCSEG00000012616	urb1	99	42.167	Cynoglossus_semilaevis
ENSCCAG00000021299	URB1	96	52.137	ENSCVAG00000009076	urb1	95	55.201	Cyprinodon_variegatus
ENSCCAG00000021299	URB1	99	43.371	ENSDARG00000060308	urb1	99	43.786	Danio_rerio
ENSCCAG00000021299	URB1	85	80.777	ENSDNOG00000015586	URB1	99	80.777	Dasypus_novemcinctus
ENSCCAG00000021299	URB1	100	80.062	ENSDORG00000006735	Urb1	100	80.062	Dipodomys_ordii
ENSCCAG00000021299	URB1	92	80.847	ENSETEG00000009080	URB1	92	80.847	Echinops_telfairi
ENSCCAG00000021299	URB1	100	82.262	ENSEASG00005007711	URB1	100	82.102	Equus_asinus_asinus
ENSCCAG00000021299	URB1	97	88.889	ENSECAG00000013206	URB1	100	89.450	Equus_caballus
ENSCCAG00000021299	URB1	58	87.029	ENSEEUG00000003626	-	57	87.029	Erinaceus_europaeus
ENSCCAG00000021299	URB1	98	44.656	ENSELUG00000020516	urb1	98	44.346	Esox_lucius
ENSCCAG00000021299	URB1	100	81.514	ENSFCAG00000002177	URB1	100	81.514	Felis_catus
ENSCCAG00000021299	URB1	98	51.506	ENSFALG00000004636	URB1	99	51.440	Ficedula_albicollis
ENSCCAG00000021299	URB1	100	80.465	ENSFDAG00000007288	URB1	95	80.465	Fukomys_damarensis
ENSCCAG00000021299	URB1	99	41.514	ENSFHEG00000000202	urb1	99	41.910	Fundulus_heteroclitus
ENSCCAG00000021299	URB1	92	48.184	ENSGMOG00000001838	urb1	93	47.745	Gadus_morhua
ENSCCAG00000021299	URB1	99	56.924	ENSGALG00000015887	URB1	99	56.948	Gallus_gallus
ENSCCAG00000021299	URB1	99	43.084	ENSGAFG00000020694	urb1	97	53.254	Gambusia_affinis
ENSCCAG00000021299	URB1	99	44.367	ENSGACG00000011703	urb1	99	44.367	Gasterosteus_aculeatus
ENSCCAG00000021299	URB1	99	58.829	ENSGAGG00000022544	URB1	99	58.777	Gopherus_agassizii
ENSCCAG00000021299	URB1	100	93.835	ENSGGOG00000000285	URB1	100	93.835	Gorilla_gorilla
ENSCCAG00000021299	URB1	99	45.154	ENSHBUG00000001904	urb1	99	44.982	Haplochromis_burtoni
ENSCCAG00000021299	URB1	99	78.717	ENSHGLG00000004907	URB1	99	78.717	Heterocephalus_glaber_female
ENSCCAG00000021299	URB1	99	79.491	ENSHGLG00100010749	URB1	99	79.491	Heterocephalus_glaber_male
ENSCCAG00000021299	URB1	72	47.750	ENSHCOG00000018683	urb1	96	47.945	Hippocampus_comes
ENSCCAG00000021299	URB1	99	40.535	ENSIPUG00000014721	urb1	99	40.491	Ictalurus_punctatus
ENSCCAG00000021299	URB1	100	82.945	ENSSTOG00000004539	URB1	100	82.945	Ictidomys_tridecemlineatus
ENSCCAG00000021299	URB1	99	45.829	ENSKMAG00000006001	urb1	99	47.518	Kryptolebias_marmoratus
ENSCCAG00000021299	URB1	97	41.663	ENSLBEG00000027208	urb1	99	51.931	Labrus_bergylta
ENSCCAG00000021299	URB1	99	48.853	ENSLACG00000017059	URB1	100	48.853	Latimeria_chalumnae
ENSCCAG00000021299	URB1	99	45.844	ENSLOCG00000009190	urb1	99	45.734	Lepisosteus_oculatus
ENSCCAG00000021299	URB1	99	78.640	ENSLAFG00000010407	URB1	100	78.640	Loxodonta_africana
ENSCCAG00000021299	URB1	100	93.483	ENSMFAG00000034391	URB1	97	93.483	Macaca_fascicularis
ENSCCAG00000021299	URB1	100	93.351	ENSMMUG00000010295	URB1	100	93.351	Macaca_mulatta
ENSCCAG00000021299	URB1	100	91.986	ENSMNEG00000032981	URB1	100	91.986	Macaca_nemestrina
ENSCCAG00000021299	URB1	100	93.703	ENSMLEG00000041435	URB1	100	93.703	Mandrillus_leucophaeus
ENSCCAG00000021299	URB1	99	43.440	ENSMAMG00000011238	urb1	99	43.259	Mastacembelus_armatus
ENSCCAG00000021299	URB1	99	40.991	ENSMZEG00005011862	urb1	99	41.927	Maylandia_zebra
ENSCCAG00000021299	URB1	98	57.740	ENSMGAG00000014512	URB1	99	57.740	Meleagris_gallopavo
ENSCCAG00000021299	URB1	92	78.978	ENSMAUG00000010516	Urb1	99	79.087	Mesocricetus_auratus
ENSCCAG00000021299	URB1	99	85.249	ENSMICG00000016424	URB1	99	85.249	Microcebus_murinus
ENSCCAG00000021299	URB1	99	74.581	ENSMOCG00000012613	Urb1	99	74.461	Microtus_ochrogaster
ENSCCAG00000021299	URB1	99	64.392	ENSMODG00000021076	URB1	100	64.333	Monodelphis_domestica
ENSCCAG00000021299	URB1	96	52.704	ENSMALG00000017411	urb1	99	52.688	Monopterus_albus
ENSCCAG00000021299	URB1	99	75.583	MGP_CAROLIEiJ_G0020948	Urb1	99	75.583	Mus_caroli
ENSCCAG00000021299	URB1	99	76.067	ENSMUSG00000039929	Urb1	99	76.067	Mus_musculus
ENSCCAG00000021299	URB1	99	75.901	MGP_PahariEiJ_G0016653	Urb1	99	75.901	Mus_pahari
ENSCCAG00000021299	URB1	99	75.748	MGP_SPRETEiJ_G0021854	Urb1	99	75.748	Mus_spretus
ENSCCAG00000021299	URB1	100	80.106	ENSMPUG00000001123	URB1	100	79.807	Mustela_putorius_furo
ENSCCAG00000021299	URB1	99	77.832	ENSNGAG00000001905	Urb1	99	77.832	Nannospalax_galili
ENSCCAG00000021299	URB1	82	45.567	ENSNBRG00000001049	urb1	98	45.848	Neolamprologus_brichardi
ENSCCAG00000021299	URB1	99	92.087	ENSNLEG00000026872	URB1	100	92.030	Nomascus_leucogenys
ENSCCAG00000021299	URB1	93	66.603	ENSMEUG00000010828	URB1	96	59.782	Notamacropus_eugenii
ENSCCAG00000021299	URB1	99	74.121	ENSOPRG00000013482	URB1	100	74.121	Ochotona_princeps
ENSCCAG00000021299	URB1	100	79.121	ENSODEG00000002587	URB1	99	79.121	Octodon_degus
ENSCCAG00000021299	URB1	99	44.880	ENSONIG00000005599	urb1	99	45.051	Oreochromis_niloticus
ENSCCAG00000021299	URB1	99	80.661	ENSOCUG00000009381	URB1	99	80.661	Oryctolagus_cuniculus
ENSCCAG00000021299	URB1	99	43.482	ENSORLG00000003429	urb1	99	43.436	Oryzias_latipes
ENSCCAG00000021299	URB1	99	43.256	ENSORLG00020013785	urb1	99	43.209	Oryzias_latipes_hni
ENSCCAG00000021299	URB1	95	46.493	ENSORLG00015019421	urb1	97	46.572	Oryzias_latipes_hsok
ENSCCAG00000021299	URB1	77	50.827	ENSOMEG00000002094	urb1	97	50.946	Oryzias_melastigma
ENSCCAG00000021299	URB1	99	84.449	ENSOGAG00000017140	URB1	100	84.449	Otolemur_garnettii
ENSCCAG00000021299	URB1	97	78.098	ENSOARG00000013679	URB1	99	78.098	Ovis_aries
ENSCCAG00000021299	URB1	100	93.879	ENSPPAG00000003423	URB1	100	93.879	Pan_paniscus
ENSCCAG00000021299	URB1	100	81.646	ENSPPRG00000023131	URB1	100	81.558	Panthera_pardus
ENSCCAG00000021299	URB1	93	79.832	ENSPTIG00000016125	URB1	99	79.734	Panthera_tigris_altaica
ENSCCAG00000021299	URB1	100	93.835	ENSPTRG00000013852	URB1	100	93.835	Pan_troglodytes
ENSCCAG00000021299	URB1	100	93.747	ENSPANG00000021964	URB1	100	93.747	Papio_anubis
ENSCCAG00000021299	URB1	99	45.892	ENSPKIG00000003683	urb1	98	46.079	Paramormyrops_kingsleyae
ENSCCAG00000021299	URB1	100	76.352	ENSPEMG00000021205	Urb1	99	76.352	Peromyscus_maniculatus_bairdii
ENSCCAG00000021299	URB1	80	33.980	ENSPMAG00000009733	URB1	100	34.085	Petromyzon_marinus
ENSCCAG00000021299	URB1	99	63.879	ENSPCIG00000016350	URB1	100	63.792	Phascolarctos_cinereus
ENSCCAG00000021299	URB1	95	43.361	ENSPLAG00000004371	urb1	99	43.361	Poecilia_latipinna
ENSCCAG00000021299	URB1	98	44.014	ENSPMEG00000006634	urb1	98	44.032	Poecilia_mexicana
ENSCCAG00000021299	URB1	98	43.970	ENSPREG00000013453	urb1	98	44.077	Poecilia_reticulata
ENSCCAG00000021299	URB1	99	93.590	ENSPPYG00000011359	URB1	100	93.527	Pongo_abelii
ENSCCAG00000021299	URB1	99	66.976	ENSPCAG00000007430	URB1	99	66.976	Procavia_capensis
ENSCCAG00000021299	URB1	100	86.350	ENSPCOG00000022695	URB1	100	86.350	Propithecus_coquereli
ENSCCAG00000021299	URB1	100	80.238	ENSPVAG00000000889	URB1	100	80.150	Pteropus_vampyrus
ENSCCAG00000021299	URB1	99	43.609	ENSPNYG00000010589	urb1	99	43.394	Pundamilia_nyererei
ENSCCAG00000021299	URB1	99	40.731	ENSPNAG00000019324	urb1	99	41.003	Pygocentrus_nattereri
ENSCCAG00000021299	URB1	99	75.682	ENSRNOG00000002080	Urb1	99	75.814	Rattus_norvegicus
ENSCCAG00000021299	URB1	100	93.134	ENSRBIG00000033122	URB1	100	93.134	Rhinopithecus_bieti
ENSCCAG00000021299	URB1	100	93.178	ENSRROG00000040237	URB1	100	93.178	Rhinopithecus_roxellana
ENSCCAG00000021299	URB1	100	95.995	ENSSBOG00000027672	URB1	100	95.995	Saimiri_boliviensis_boliviensis
ENSCCAG00000021299	URB1	99	63.848	ENSSHAG00000005140	URB1	100	63.848	Sarcophilus_harrisii
ENSCCAG00000021299	URB1	91	46.286	ENSSFOG00015000339	urb1	97	46.734	Scleropages_formosus
ENSCCAG00000021299	URB1	98	44.425	ENSSMAG00000003782	urb1	99	44.181	Scophthalmus_maximus
ENSCCAG00000021299	URB1	99	44.760	ENSSDUG00000012313	urb1	99	44.760	Seriola_dumerili
ENSCCAG00000021299	URB1	99	44.691	ENSSLDG00000023179	urb1	99	44.691	Seriola_lalandi_dorsalis
ENSCCAG00000021299	URB1	99	55.643	ENSSPUG00000012447	URB1	99	55.643	Sphenodon_punctatus
ENSCCAG00000021299	URB1	99	44.372	ENSSPAG00000006325	urb1	99	44.508	Stegastes_partitus
ENSCCAG00000021299	URB1	100	79.165	ENSSSCG00000032024	URB1	100	79.121	Sus_scrofa
ENSCCAG00000021299	URB1	73	58.039	ENSTGUG00000013442	URB1	100	58.039	Taeniopygia_guttata
ENSCCAG00000021299	URB1	99	44.226	ENSTRUG00000009372	urb1	99	44.204	Takifugu_rubripes
ENSCCAG00000021299	URB1	99	42.995	ENSTNIG00000016277	urb1	99	42.876	Tetraodon_nigroviridis
ENSCCAG00000021299	URB1	81	85.217	ENSTBEG00000010044	URB1	81	85.217	Tupaia_belangeri
ENSCCAG00000021299	URB1	91	79.372	ENSTTRG00000007712	URB1	92	79.267	Tursiops_truncatus
ENSCCAG00000021299	URB1	100	81.558	ENSUAMG00000012231	URB1	99	81.470	Ursus_americanus
ENSCCAG00000021299	URB1	94	81.823	ENSUMAG00000017419	URB1	99	82.338	Ursus_maritimus
ENSCCAG00000021299	URB1	68	87.234	ENSVPAG00000001164	URB1	68	87.234	Vicugna_pacos
ENSCCAG00000021299	URB1	100	81.538	ENSVVUG00000000551	URB1	100	81.538	Vulpes_vulpes
ENSCCAG00000021299	URB1	99	49.892	ENSXETG00000009895	urb1	99	50.306	Xenopus_tropicalis
ENSCCAG00000021299	URB1	99	41.391	ENSXCOG00000005500	urb1	99	41.442	Xiphophorus_couchianus
ENSCCAG00000021299	URB1	99	41.454	ENSXMAG00000007253	urb1	99	41.460	Xiphophorus_maculatus