EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000021349 (Gene tree)
Gene ID: 108310473
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC108310473
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 104138 bases
Position: chrKV389529.1:3512290-3616427
Accession: 108310473
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000007256	RNA_pol_L_2	PF13656.6	4.1e-28	1	1
ENSCCAP00000007256	RNA_pol_L	PF01193.24	7.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000024612	-	2297	XM_017537510	ENSCCAP00000007243	94 (aa)	XP_017392999	A0A2K5PUD6
ENSCCAT00000024608	-	2032	XM_017537509	ENSCCAP00000007239	122 (aa)	XP_017392998	A0A2K5PUC6
ENSCCAT00000024581	-	141	-	ENSCCAP00000007212	46 (aa)	-	A0A2K5PU93
ENSCCAT00000024627	-	806	XM_017537508	ENSCCAP00000007256	133 (aa)	XP_017392997	A0A2K5PUF8
ENSCCAT00000024620	-	129	-	ENSCCAP00000007250	42 (aa)	-	A0A2K5PUD8

Gene Model

Click here to download ENSCCAG00000021349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000021349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000021349	-	77	32.039	ENSCCAG00000029378	-	85	32.039
ENSCCAG00000021349	-	100	78.947	ENSCCAG00000020191	-	100	78.947

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000021349	-	100	96.992	ENSG00000186184	POLR1D	100	96.992	Homo_sapiens
ENSCCAG00000021349	-	83	68.468	ENSAPOG00000021882	polr1d	98	68.468	Acanthochromis_polyacanthus
ENSCCAG00000021349	-	94	97.600	ENSAMEG00000019095	POLR1D	100	97.600	Ailuropoda_melanoleuca
ENSCCAG00000021349	-	77	75.490	ENSACIG00000013328	polr1d	89	75.490	Amphilophus_citrinellus
ENSCCAG00000021349	-	84	67.857	ENSAOCG00000018500	polr1d	98	67.857	Amphiprion_ocellaris
ENSCCAG00000021349	-	84	66.964	ENSAPEG00000009489	polr1d	98	66.964	Amphiprion_percula
ENSCCAG00000021349	-	80	68.224	ENSATEG00000019322	polr1d	94	68.224	Anabas_testudineus
ENSCCAG00000021349	-	83	65.766	ENSACAG00000015753	POLR1D	96	65.766	Anolis_carolinensis
ENSCCAG00000021349	-	100	98.496	ENSANAG00000024486	POLR1D	100	98.496	Aotus_nancymaae
ENSCCAG00000021349	-	80	71.963	ENSACLG00000023805	polr1d	94	71.963	Astatotilapia_calliptera
ENSCCAG00000021349	-	80	69.811	ENSAMXG00000036118	polr1d	92	69.811	Astyanax_mexicanus
ENSCCAG00000021349	-	100	93.985	ENSBTAG00000008642	POLR1D	100	93.985	Bos_taurus
ENSCCAG00000021349	-	100	93.985	ENSBTAG00000033252	-	100	93.985	Bos_taurus
ENSCCAG00000021349	-	62	37.805	WBGene00010230	rpac-19	57	37.805	Caenorhabditis_elegans
ENSCCAG00000021349	-	100	97.744	ENSCJAG00000044669	POLR1D	100	97.744	Callithrix_jacchus
ENSCCAG00000021349	-	100	97.744	ENSCAFG00000006755	POLR1D	100	97.744	Canis_familiaris
ENSCCAG00000021349	-	100	94.737	ENSCHIG00000021910	POLR1D	100	94.737	Capra_hircus
ENSCCAG00000021349	-	96	82.308	ENSTSYG00000034852	-	98	82.353	Carlito_syrichta
ENSCCAG00000021349	-	93	92.742	ENSTSYG00000026817	-	93	92.742	Carlito_syrichta
ENSCCAG00000021349	-	96	53.906	ENSCAPG00000006058	-	99	53.906	Cavia_aperea
ENSCCAG00000021349	-	96	54.688	ENSCPOG00000030450	-	99	54.688	Cavia_porcellus
ENSCCAG00000021349	-	100	85.714	ENSCATG00000022900	-	100	85.714	Cercocebus_atys
ENSCCAG00000021349	-	100	96.241	ENSCATG00000030710	-	100	96.241	Cercocebus_atys
ENSCCAG00000021349	-	93	95.161	ENSCLAG00000017623	POLR1D	100	95.161	Chinchilla_lanigera
ENSCCAG00000021349	-	73	79.381	ENSCPBG00000004719	POLR1D	96	79.381	Chrysemys_picta_bellii
ENSCCAG00000021349	-	100	96.241	ENSCANG00000028632	-	100	96.241	Colobus_angolensis_palliatus
ENSCCAG00000021349	-	100	92.481	ENSCANG00000037694	-	100	92.481	Colobus_angolensis_palliatus
ENSCCAG00000021349	-	100	93.985	ENSCGRG00001021251	Polr1d	100	93.985	Cricetulus_griseus_chok1gshd
ENSCCAG00000021349	-	100	93.985	ENSCGRG00000011639	Polr1d	100	93.985	Cricetulus_griseus_crigri
ENSCCAG00000021349	-	77	72.816	ENSCSEG00000018268	polr1d	91	70.093	Cynoglossus_semilaevis
ENSCCAG00000021349	-	79	72.381	ENSCVAG00000018527	polr1d	92	72.381	Cyprinodon_variegatus
ENSCCAG00000021349	-	83	67.273	ENSDARG00000037570	polr1d	98	67.273	Danio_rerio
ENSCCAG00000021349	-	100	93.985	ENSDNOG00000043676	-	100	93.985	Dasypus_novemcinctus
ENSCCAG00000021349	-	100	91.791	ENSDNOG00000046247	-	100	91.791	Dasypus_novemcinctus
ENSCCAG00000021349	-	100	93.985	ENSDORG00000029155	Polr1d	100	93.985	Dipodomys_ordii
ENSCCAG00000021349	-	65	43.023	FBgn0086447	l(2)37Cg	81	43.023	Drosophila_melanogaster
ENSCCAG00000021349	-	93	88.710	ENSETEG00000012797	POLR1D	100	88.710	Echinops_telfairi
ENSCCAG00000021349	-	69	69.565	ENSEBUG00000011748	polr1d	63	69.565	Eptatretus_burgeri
ENSCCAG00000021349	-	96	95.312	ENSEASG00005022487	POLR1D	99	95.312	Equus_asinus_asinus
ENSCCAG00000021349	-	93	95.968	ENSEEUG00000013144	POLR1D	100	95.968	Erinaceus_europaeus
ENSCCAG00000021349	-	80	69.811	ENSELUG00000005105	rpac2	93	69.811	Esox_lucius
ENSCCAG00000021349	-	100	96.241	ENSFCAG00000030162	POLR1D	100	96.241	Felis_catus
ENSCCAG00000021349	-	72	77.083	ENSFALG00000011463	POLR1D	95	77.083	Ficedula_albicollis
ENSCCAG00000021349	-	100	93.985	ENSFDAG00000004463	POLR1D	100	93.985	Fukomys_damarensis
ENSCCAG00000021349	-	80	74.074	ENSFHEG00000015410	polr1d	94	74.074	Fundulus_heteroclitus
ENSCCAG00000021349	-	79	73.333	ENSGAFG00000001693	polr1d	92	73.333	Gambusia_affinis
ENSCCAG00000021349	-	88	69.492	ENSGACG00000018585	polr1d	100	69.492	Gasterosteus_aculeatus
ENSCCAG00000021349	-	80	79.245	ENSGAGG00000008503	POLR1D	93	79.245	Gopherus_agassizii
ENSCCAG00000021349	-	100	96.992	ENSGGOG00000004235	POLR1D	100	96.992	Gorilla_gorilla
ENSCCAG00000021349	-	80	71.963	ENSHBUG00000002111	polr1d	94	71.963	Haplochromis_burtoni
ENSCCAG00000021349	-	100	93.985	ENSHGLG00000003202	POLR1D	100	93.985	Heterocephalus_glaber_female
ENSCCAG00000021349	-	100	93.985	ENSHGLG00100009393	POLR1D	100	93.985	Heterocephalus_glaber_male
ENSCCAG00000021349	-	80	70.093	ENSHCOG00000003258	polr1d	94	70.093	Hippocampus_comes
ENSCCAG00000021349	-	79	73.333	ENSIPUG00000014810	polr1d	91	73.333	Ictalurus_punctatus
ENSCCAG00000021349	-	100	97.744	ENSSTOG00000013877	POLR1D	100	97.744	Ictidomys_tridecemlineatus
ENSCCAG00000021349	-	95	74.603	ENSJJAG00000021667	-	75	74.603	Jaculus_jaculus
ENSCCAG00000021349	-	97	89.474	ENSJJAG00000022671	-	100	92.500	Jaculus_jaculus
ENSCCAG00000021349	-	80	66.981	ENSKMAG00000015256	polr1d	93	66.981	Kryptolebias_marmoratus
ENSCCAG00000021349	-	79	73.333	ENSLBEG00000015919	polr1d	92	73.333	Labrus_bergylta
ENSCCAG00000021349	-	86	66.087	ENSLACG00000006810	POLR1D	95	66.087	Latimeria_chalumnae
ENSCCAG00000021349	-	54	77.027	ENSLOCG00000014976	polr1d	100	77.027	Lepisosteus_oculatus
ENSCCAG00000021349	-	100	87.970	ENSLAFG00000032290	POLR1D	100	87.970	Loxodonta_africana
ENSCCAG00000021349	-	94	96.000	ENSMFAG00000045264	POLR1D	97	96.000	Macaca_fascicularis
ENSCCAG00000021349	-	100	76.692	ENSMMUG00000041570	-	100	76.692	Macaca_mulatta
ENSCCAG00000021349	-	87	96.552	ENSMMUG00000020386	POLR1D	100	96.552	Macaca_mulatta
ENSCCAG00000021349	-	100	96.992	ENSMNEG00000008630	-	100	96.992	Macaca_nemestrina
ENSCCAG00000021349	-	100	80.451	ENSMNEG00000038120	-	100	80.451	Macaca_nemestrina
ENSCCAG00000021349	-	100	96.992	ENSMLEG00000041048	-	100	96.992	Mandrillus_leucophaeus
ENSCCAG00000021349	-	100	85.714	ENSMLEG00000032251	-	100	85.714	Mandrillus_leucophaeus
ENSCCAG00000021349	-	76	72.277	ENSMAMG00000014834	polr1d	94	72.277	Mastacembelus_armatus
ENSCCAG00000021349	-	75	76.000	ENSMZEG00005006638	polr1d	88	76.000	Maylandia_zebra
ENSCCAG00000021349	-	69	78.261	ENSMGAG00000005322	POLR1D	84	78.261	Meleagris_gallopavo
ENSCCAG00000021349	-	100	93.985	ENSMAUG00000001946	Polr1d	100	93.985	Mesocricetus_auratus
ENSCCAG00000021349	-	100	95.489	ENSMICG00000016883	-	100	95.489	Microcebus_murinus
ENSCCAG00000021349	-	99	79.545	ENSMICG00000007349	-	100	79.545	Microcebus_murinus
ENSCCAG00000021349	-	99	93.182	ENSMOCG00000021288	Polr1d	99	93.182	Microtus_ochrogaster
ENSCCAG00000021349	-	80	69.159	ENSMMOG00000009605	polr1d	94	69.159	Mola_mola
ENSCCAG00000021349	-	80	86.792	ENSMODG00000023881	POLR1D	93	86.792	Monodelphis_domestica
ENSCCAG00000021349	-	80	68.224	ENSMALG00000010652	polr1d	94	68.224	Monopterus_albus
ENSCCAG00000021349	-	100	88.722	MGP_CAROLIEiJ_G0028034	Polr1d	100	88.722	Mus_caroli
ENSCCAG00000021349	-	100	88.722	ENSMUSG00000029642	Polr1d	100	88.722	Mus_musculus
ENSCCAG00000021349	-	100	87.970	MGP_PahariEiJ_G0024600	Polr1d	100	87.970	Mus_pahari
ENSCCAG00000021349	-	100	89.474	MGP_SPRETEiJ_G0029032	Polr1d	100	89.474	Mus_spretus
ENSCCAG00000021349	-	99	86.364	ENSMLUG00000004118	-	99	86.364	Myotis_lucifugus
ENSCCAG00000021349	-	100	95.489	ENSMLUG00000027169	-	100	95.489	Myotis_lucifugus
ENSCCAG00000021349	-	87	96.552	ENSNGAG00000006014	Polr1d	100	96.552	Nannospalax_galili
ENSCCAG00000021349	-	80	71.963	ENSNBRG00000020327	polr1d	94	71.963	Neolamprologus_brichardi
ENSCCAG00000021349	-	100	96.992	ENSNLEG00000000358	POLR1D	100	96.992	Nomascus_leucogenys
ENSCCAG00000021349	-	100	93.985	ENSODEG00000005294	-	100	93.985	Octodon_degus
ENSCCAG00000021349	-	100	79.699	ENSODEG00000014801	-	100	79.699	Octodon_degus
ENSCCAG00000021349	-	79	82.857	ENSOANG00000008708	-	97	82.857	Ornithorhynchus_anatinus
ENSCCAG00000021349	-	100	95.489	ENSOCUG00000015706	POLR1D	82	95.489	Oryctolagus_cuniculus
ENSCCAG00000021349	-	80	68.224	ENSORLG00000010257	polr1d	94	68.224	Oryzias_latipes
ENSCCAG00000021349	-	83	66.667	ENSORLG00020000533	polr1d	75	66.667	Oryzias_latipes_hni
ENSCCAG00000021349	-	85	67.257	ENSORLG00015013267	polr1d	75	67.257	Oryzias_latipes_hsok
ENSCCAG00000021349	-	86	66.957	ENSOMEG00000014912	polr1d	77	66.957	Oryzias_melastigma
ENSCCAG00000021349	-	100	95.489	ENSOGAG00000014601	POLR1D	100	95.489	Otolemur_garnettii
ENSCCAG00000021349	-	94	94.400	ENSOARG00000017005	POLR1D	96	94.400	Ovis_aries
ENSCCAG00000021349	-	100	95.489	ENSPPAG00000028138	POLR1D	100	95.489	Pan_paniscus
ENSCCAG00000021349	-	99	96.212	ENSPPRG00000003381	POLR1D	99	96.212	Panthera_pardus
ENSCCAG00000021349	-	93	95.968	ENSPTIG00000018137	POLR1D	93	95.968	Panthera_tigris_altaica
ENSCCAG00000021349	-	100	96.992	ENSPTRG00000005734	POLR1D	100	96.992	Pan_troglodytes
ENSCCAG00000021349	-	100	84.962	ENSPANG00000035051	-	100	84.962	Papio_anubis
ENSCCAG00000021349	-	100	96.992	ENSPANG00000020259	-	100	96.992	Papio_anubis
ENSCCAG00000021349	-	86	62.609	ENSPKIG00000021891	polr1d	90	53.097	Paramormyrops_kingsleyae
ENSCCAG00000021349	-	87	73.504	ENSPSIG00000011822	POLR1D	91	73.504	Pelodiscus_sinensis
ENSCCAG00000021349	-	93	56.800	ENSPMGG00000012998	POLR1D	93	56.800	Periophthalmus_magnuspinnatus
ENSCCAG00000021349	-	84	66.071	ENSPMGG00000010359	polr1d	97	66.071	Periophthalmus_magnuspinnatus
ENSCCAG00000021349	-	100	90.226	ENSPEMG00000006336	-	100	90.226	Peromyscus_maniculatus_bairdii
ENSCCAG00000021349	-	82	59.633	ENSPMAG00000004228	polr1d	92	59.633	Petromyzon_marinus
ENSCCAG00000021349	-	80	86.792	ENSPCIG00000001673	POLR1D	93	86.792	Phascolarctos_cinereus
ENSCCAG00000021349	-	79	73.333	ENSPFOG00000023343	polr1d	92	75.000	Poecilia_formosa
ENSCCAG00000021349	-	79	73.333	ENSPLAG00000009675	polr1d	92	73.333	Poecilia_latipinna
ENSCCAG00000021349	-	79	73.333	ENSPMEG00000004628	polr1d	92	73.333	Poecilia_mexicana
ENSCCAG00000021349	-	79	73.333	ENSPREG00000022032	polr1d	92	73.333	Poecilia_reticulata
ENSCCAG00000021349	-	100	95.489	ENSPCOG00000028175	POLR1D	100	95.489	Propithecus_coquereli
ENSCCAG00000021349	-	80	71.963	ENSPNYG00000000107	polr1d	94	71.963	Pundamilia_nyererei
ENSCCAG00000021349	-	76	67.327	ENSPNAG00000001512	polr1d	87	66.346	Pygocentrus_nattereri
ENSCCAG00000021349	-	100	92.481	ENSRBIG00000000336	-	100	92.481	Rhinopithecus_bieti
ENSCCAG00000021349	-	100	96.992	ENSRBIG00000036378	-	100	96.992	Rhinopithecus_bieti
ENSCCAG00000021349	-	100	92.481	ENSRROG00000026751	-	100	92.481	Rhinopithecus_roxellana
ENSCCAG00000021349	-	100	96.992	ENSRROG00000042232	-	100	96.992	Rhinopithecus_roxellana
ENSCCAG00000021349	-	90	45.833	YNL113W	RPC19	85	45.833	Saccharomyces_cerevisiae
ENSCCAG00000021349	-	100	98.496	ENSSBOG00000028482	-	100	98.496	Saimiri_boliviensis_boliviensis
ENSCCAG00000021349	-	86	92.105	ENSSBOG00000030146	-	84	92.105	Saimiri_boliviensis_boliviensis
ENSCCAG00000021349	-	86	79.825	ENSSHAG00000001190	POLR1D	88	79.825	Sarcophilus_harrisii
ENSCCAG00000021349	-	82	73.394	ENSSFOG00015011375	polr1d	96	73.394	Scleropages_formosus
ENSCCAG00000021349	-	80	69.159	ENSSMAG00000011861	polr1d	94	69.159	Scophthalmus_maximus
ENSCCAG00000021349	-	80	68.224	ENSSDUG00000011930	polr1d	94	68.224	Seriola_dumerili
ENSCCAG00000021349	-	86	64.348	ENSSLDG00000023871	polr1d	97	64.348	Seriola_lalandi_dorsalis
ENSCCAG00000021349	-	100	96.241	ENSSARG00000007840	POLR1D	100	96.241	Sorex_araneus
ENSCCAG00000021349	-	79	75.238	ENSSPUG00000005786	POLR1D	95	72.072	Sphenodon_punctatus
ENSCCAG00000021349	-	79	73.333	ENSSPAG00000011764	polr1d	92	73.333	Stegastes_partitus
ENSCCAG00000021349	-	100	93.985	ENSSSCG00000009310	POLR1D	100	93.985	Sus_scrofa
ENSCCAG00000021349	-	72	77.083	ENSTGUG00000005450	POLR1D	100	77.083	Taeniopygia_guttata
ENSCCAG00000021349	-	78	65.385	ENSTRUG00000019741	polr1d	91	65.385	Takifugu_rubripes
ENSCCAG00000021349	-	93	95.968	ENSTBEG00000007006	POLR1D	100	95.968	Tupaia_belangeri
ENSCCAG00000021349	-	100	97.744	ENSUAMG00000011413	POLR1D	100	97.744	Ursus_americanus
ENSCCAG00000021349	-	93	97.581	ENSUMAG00000016968	POLR1D	97	97.581	Ursus_maritimus
ENSCCAG00000021349	-	100	97.744	ENSVVUG00000009216	POLR1D	100	97.744	Vulpes_vulpes
ENSCCAG00000021349	-	74	76.531	ENSXCOG00000011731	polr1d	75	76.531	Xiphophorus_couchianus
ENSCCAG00000021349	-	74	76.531	ENSXMAG00000017538	polr1d	75	76.531	Xiphophorus_maculatus