EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000021429 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 1516 bases
Position: chrKV389484.1:4774188-4775703
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000007360	THUMP	PF02926.17	3.5e-06	1	1
ENSCCAP00000007363	THUMP	PF02926.17	3.9e-06	1	1
ENSCCAP00000007360	UPF0020	PF01170.18	3e-34	1	1
ENSCCAP00000007363	UPF0020	PF01170.18	3.4e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000024734	-	1380	-	ENSCCAP00000007360	459 (aa)	-	A0A2K5PUP5
ENSCCAT00000024737	-	1437	-	ENSCCAP00000007363	478 (aa)	-	A0A2K5PUQ7

Gene Model

Click here to download ENSCCAG00000021429's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000021429's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000021429	-	100	90.656	ENSCCAG00000027067	-	100	90.656

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000021429	-	100	88.072	ENSG00000134077	THUMPD3	100	91.870	Homo_sapiens
ENSCCAG00000021429	-	94	52.980	ENSAPOG00000015836	thumpd3	92	51.957	Acanthochromis_polyacanthus
ENSCCAG00000021429	-	100	76.587	ENSAMEG00000011321	THUMPD3	100	76.587	Ailuropoda_melanoleuca
ENSCCAG00000021429	-	95	51.158	ENSACIG00000020096	thumpd3	93	50.316	Amphilophus_citrinellus
ENSCCAG00000021429	-	94	52.119	ENSAOCG00000004399	thumpd3	93	51.368	Amphiprion_ocellaris
ENSCCAG00000021429	-	93	52.248	ENSAPEG00000016740	thumpd3	93	51.158	Amphiprion_percula
ENSCCAG00000021429	-	94	53.659	ENSATEG00000005345	thumpd3	90	52.391	Anabas_testudineus
ENSCCAG00000021429	-	80	61.421	ENSAPLG00000003598	THUMPD3	99	61.461	Anas_platyrhynchos
ENSCCAG00000021429	-	99	57.396	ENSACAG00000014974	THUMPD3	98	57.422	Anolis_carolinensis
ENSCCAG00000021429	-	100	89.662	ENSANAG00000002365	THUMPD3	100	89.662	Aotus_nancymaae
ENSCCAG00000021429	-	85	36.430	ENSACLG00000013504	-	85	35.208	Astatotilapia_calliptera
ENSCCAG00000021429	-	94	52.863	ENSACLG00000023333	thumpd3	90	51.410	Astatotilapia_calliptera
ENSCCAG00000021429	-	92	54.402	ENSAMXG00000015683	thumpd3	95	53.595	Astyanax_mexicanus
ENSCCAG00000021429	-	99	74.800	ENSBTAG00000003112	THUMPD3	99	74.800	Bos_taurus
ENSCCAG00000021429	-	92	32.346	WBGene00010846	M04B2.2	98	32.346	Caenorhabditis_elegans
ENSCCAG00000021429	-	100	89.066	ENSCJAG00000015949	THUMPD3	99	89.066	Callithrix_jacchus
ENSCCAG00000021429	-	78	77.662	ENSCAFG00000008060	-	94	77.662	Canis_familiaris
ENSCCAG00000021429	-	100	77.778	ENSCAFG00000005499	THUMPD3	100	77.778	Canis_familiaris
ENSCCAG00000021429	-	100	77.778	ENSCAFG00020008895	-	100	77.778	Canis_lupus_dingo
ENSCCAG00000021429	-	83	77.594	ENSCAFG00020025887	-	98	77.594	Canis_lupus_dingo
ENSCCAG00000021429	-	99	75.200	ENSCHIG00000024037	THUMPD3	99	75.200	Capra_hircus
ENSCCAG00000021429	-	100	83.101	ENSTSYG00000000159	THUMPD3	100	83.101	Carlito_syrichta
ENSCCAG00000021429	-	100	51.626	ENSCAPG00000017486	THUMPD3	100	51.829	Cavia_aperea
ENSCCAG00000021429	-	100	75.446	ENSCPOG00000033287	THUMPD3	100	75.446	Cavia_porcellus
ENSCCAG00000021429	-	100	87.078	ENSCATG00000040999	THUMPD3	100	87.078	Cercocebus_atys
ENSCCAG00000021429	-	100	76.436	ENSCLAG00000000690	THUMPD3	100	76.436	Chinchilla_lanigera
ENSCCAG00000021429	-	100	87.078	ENSCSAG00000010753	THUMPD3	100	87.078	Chlorocebus_sabaeus
ENSCCAG00000021429	-	86	61.889	ENSCHOG00000012851	THUMPD3	85	61.889	Choloepus_hoffmanni
ENSCCAG00000021429	-	99	61.368	ENSCPBG00000014771	THUMPD3	100	60.039	Chrysemys_picta_bellii
ENSCCAG00000021429	-	92	38.255	ENSCSAVG00000008668	-	96	37.556	Ciona_savignyi
ENSCCAG00000021429	-	100	87.078	ENSCANG00000031901	THUMPD3	100	87.078	Colobus_angolensis_palliatus
ENSCCAG00000021429	-	100	74.603	ENSCGRG00001024117	Thumpd3	100	74.603	Cricetulus_griseus_chok1gshd
ENSCCAG00000021429	-	100	74.603	ENSCGRG00000018116	Thumpd3	100	74.603	Cricetulus_griseus_crigri
ENSCCAG00000021429	-	92	53.125	ENSCSEG00000002546	thumpd3	93	52.452	Cynoglossus_semilaevis
ENSCCAG00000021429	-	92	53.153	ENSCVAG00000001019	thumpd3	89	50.759	Cyprinodon_variegatus
ENSCCAG00000021429	-	94	54.255	ENSDARG00000059634	thumpd3	96	52.731	Danio_rerio
ENSCCAG00000021429	-	99	77.479	ENSDNOG00000047668	THUMPD3	98	80.676	Dasypus_novemcinctus
ENSCCAG00000021429	-	99	76.446	ENSDORG00000003257	Thumpd3	99	75.746	Dipodomys_ordii
ENSCCAG00000021429	-	71	73.373	ENSETEG00000020239	-	66	73.373	Echinops_telfairi
ENSCCAG00000021429	-	89	48.276	ENSEBUG00000004221	thumpd3	95	48.736	Eptatretus_burgeri
ENSCCAG00000021429	-	100	75.992	ENSEASG00005013327	THUMPD3	100	75.992	Equus_asinus_asinus
ENSCCAG00000021429	-	100	78.175	ENSECAG00000002016	THUMPD3	100	78.175	Equus_caballus
ENSCCAG00000021429	-	100	69.643	ENSEEUG00000014696	THUMPD3	99	69.643	Erinaceus_europaeus
ENSCCAG00000021429	-	79	62.249	ENSELUG00000018246	thumpd3	65	62.745	Esox_lucius
ENSCCAG00000021429	-	100	78.571	ENSFCAG00000006171	THUMPD3	99	78.571	Felis_catus
ENSCCAG00000021429	-	86	58.974	ENSFALG00000013631	THUMPD3	91	58.257	Ficedula_albicollis
ENSCCAG00000021429	-	100	75.446	ENSFDAG00000014825	THUMPD3	100	75.446	Fukomys_damarensis
ENSCCAG00000021429	-	94	52.318	ENSFHEG00000006006	thumpd3	91	50.746	Fundulus_heteroclitus
ENSCCAG00000021429	-	93	50.664	ENSGMOG00000007923	thumpd3	90	50.545	Gadus_morhua
ENSCCAG00000021429	-	92	57.783	ENSGALG00000044813	THUMPD3	95	59.275	Gallus_gallus
ENSCCAG00000021429	-	94	53.159	ENSGAFG00000021645	thumpd3	93	52.183	Gambusia_affinis
ENSCCAG00000021429	-	92	52.106	ENSGACG00000000930	thumpd3	96	51.055	Gasterosteus_aculeatus
ENSCCAG00000021429	-	99	61.569	ENSGAGG00000022750	THUMPD3	100	60.232	Gopherus_agassizii
ENSCCAG00000021429	-	100	87.674	ENSGGOG00000000604	THUMPD3	99	87.674	Gorilla_gorilla
ENSCCAG00000021429	-	94	53.084	ENSHBUG00000013405	thumpd3	90	51.410	Haplochromis_burtoni
ENSCCAG00000021429	-	100	74.851	ENSHGLG00000016200	THUMPD3	100	74.851	Heterocephalus_glaber_female
ENSCCAG00000021429	-	99	64.669	ENSHGLG00100000505	-	99	64.669	Heterocephalus_glaber_male
ENSCCAG00000021429	-	100	75.050	ENSHGLG00100017321	-	100	75.050	Heterocephalus_glaber_male
ENSCCAG00000021429	-	94	51.747	ENSHCOG00000004871	thumpd3	95	50.638	Hippocampus_comes
ENSCCAG00000021429	-	92	53.881	ENSIPUG00000019415	THUMPD3	90	51.522	Ictalurus_punctatus
ENSCCAG00000021429	-	100	79.167	ENSSTOG00000003973	THUMPD3	100	79.167	Ictidomys_tridecemlineatus
ENSCCAG00000021429	-	99	69.138	ENSJJAG00000017751	Thumpd3	98	69.138	Jaculus_jaculus
ENSCCAG00000021429	-	92	53.653	ENSKMAG00000021025	thumpd3	83	52.584	Kryptolebias_marmoratus
ENSCCAG00000021429	-	94	53.111	ENSLBEG00000012252	thumpd3	92	51.566	Labrus_bergylta
ENSCCAG00000021429	-	92	57.871	ENSLACG00000018604	THUMPD3	90	58.388	Latimeria_chalumnae
ENSCCAG00000021429	-	93	54.860	ENSLOCG00000009800	thumpd3	95	54.936	Lepisosteus_oculatus
ENSCCAG00000021429	-	99	78.926	ENSLAFG00000005103	THUMPD3	99	78.330	Loxodonta_africana
ENSCCAG00000021429	-	100	87.190	ENSMFAG00000044884	THUMPD3	100	87.078	Macaca_fascicularis
ENSCCAG00000021429	-	100	87.190	ENSMMUG00000017307	THUMPD3	100	87.078	Macaca_mulatta
ENSCCAG00000021429	-	100	87.190	ENSMNEG00000030529	THUMPD3	100	87.078	Macaca_nemestrina
ENSCCAG00000021429	-	100	86.879	ENSMLEG00000032943	THUMPD3	100	86.879	Mandrillus_leucophaeus
ENSCCAG00000021429	-	93	52.088	ENSMAMG00000023934	thumpd3	90	52.155	Mastacembelus_armatus
ENSCCAG00000021429	-	94	52.863	ENSMZEG00005010623	thumpd3	90	51.410	Maylandia_zebra
ENSCCAG00000021429	-	81	58.354	ENSMGAG00000010182	THUMPD3	100	59.158	Meleagris_gallopavo
ENSCCAG00000021429	-	100	75.397	ENSMAUG00000012250	Thumpd3	100	75.397	Mesocricetus_auratus
ENSCCAG00000021429	-	99	80.645	ENSMICG00000010095	THUMPD3	96	80.439	Microcebus_murinus
ENSCCAG00000021429	-	100	74.059	ENSMOCG00000020148	Thumpd3	100	74.059	Microtus_ochrogaster
ENSCCAG00000021429	-	95	50.210	ENSMMOG00000021791	thumpd3	97	50.000	Mola_mola
ENSCCAG00000021429	-	99	64.634	ENSMODG00000004715	-	99	63.851	Monodelphis_domestica
ENSCCAG00000021429	-	95	51.828	ENSMALG00000017316	thumpd3	96	51.271	Monopterus_albus
ENSCCAG00000021429	-	66	71.019	MGP_CAROLIEiJ_G0028714	-	65	71.019	Mus_caroli
ENSCCAG00000021429	-	99	73.859	ENSMUSG00000030264	Thumpd3	99	73.161	Mus_musculus
ENSCCAG00000021429	-	100	71.372	MGP_PahariEiJ_G0022465	Thumpd3	100	72.421	Mus_pahari
ENSCCAG00000021429	-	100	73.016	MGP_SPRETEiJ_G0029742	Thumpd3	100	73.016	Mus_spretus
ENSCCAG00000021429	-	100	77.778	ENSMPUG00000017066	-	99	77.778	Mustela_putorius_furo
ENSCCAG00000021429	-	99	73.814	ENSMPUG00000005219	-	99	73.608	Mustela_putorius_furo
ENSCCAG00000021429	-	99	76.190	ENSMLUG00000008538	THUMPD3	97	75.952	Myotis_lucifugus
ENSCCAG00000021429	-	99	60.400	ENSNGAG00000001549	-	99	60.600	Nannospalax_galili
ENSCCAG00000021429	-	99	76.812	ENSNGAG00000021014	-	99	76.800	Nannospalax_galili
ENSCCAG00000021429	-	94	52.643	ENSNBRG00000004886	thumpd3	90	50.862	Neolamprologus_brichardi
ENSCCAG00000021429	-	100	87.674	ENSNLEG00000003863	THUMPD3	100	87.674	Nomascus_leucogenys
ENSCCAG00000021429	-	81	67.000	ENSMEUG00000009819	THUMPD3	99	65.871	Notamacropus_eugenii
ENSCCAG00000021429	-	82	73.270	ENSOPRG00000002020	THUMPD3	99	73.270	Ochotona_princeps
ENSCCAG00000021429	-	72	74.366	ENSODEG00000018242	THUMPD3	100	74.366	Octodon_degus
ENSCCAG00000021429	-	92	52.703	ENSONIG00000018977	thumpd3	91	50.858	Oreochromis_niloticus
ENSCCAG00000021429	-	81	60.199	ENSOANG00000014481	THUMPD3	98	59.615	Ornithorhynchus_anatinus
ENSCCAG00000021429	-	99	76.693	ENSOCUG00000010921	THUMPD3	99	76.693	Oryctolagus_cuniculus
ENSCCAG00000021429	-	93	52.527	ENSORLG00000000676	thumpd3	91	51.732	Oryzias_latipes
ENSCCAG00000021429	-	93	52.967	ENSORLG00020007509	thumpd3	91	52.165	Oryzias_latipes_hni
ENSCCAG00000021429	-	93	52.967	ENSORLG00015003615	thumpd3	91	52.165	Oryzias_latipes_hsok
ENSCCAG00000021429	-	93	52.116	ENSOMEG00000014115	thumpd3	90	51.535	Oryzias_melastigma
ENSCCAG00000021429	-	81	80.952	ENSOGAG00000017111	THUMPD3	100	80.583	Otolemur_garnettii
ENSCCAG00000021429	-	99	74.950	ENSOARG00000007139	THUMPD3	97	74.950	Ovis_aries
ENSCCAG00000021429	-	100	87.873	ENSPPAG00000025852	THUMPD3	99	87.873	Pan_paniscus
ENSCCAG00000021429	-	100	78.571	ENSPPRG00000008071	THUMPD3	99	78.571	Panthera_pardus
ENSCCAG00000021429	-	100	78.373	ENSPTIG00000017923	THUMPD3	100	78.373	Panthera_tigris_altaica
ENSCCAG00000021429	-	100	87.873	ENSPTRG00000014585	THUMPD3	99	87.873	Pan_troglodytes
ENSCCAG00000021429	-	100	86.879	ENSPANG00000016253	THUMPD3	99	86.879	Papio_anubis
ENSCCAG00000021429	-	92	57.207	ENSPKIG00000014009	thumpd3	92	56.182	Paramormyrops_kingsleyae
ENSCCAG00000021429	-	99	61.134	ENSPSIG00000007370	THUMPD3	100	59.806	Pelodiscus_sinensis
ENSCCAG00000021429	-	92	54.795	ENSPMGG00000017563	thumpd3	92	54.222	Periophthalmus_magnuspinnatus
ENSCCAG00000021429	-	100	73.810	ENSPEMG00000022411	Thumpd3	100	73.810	Peromyscus_maniculatus_bairdii
ENSCCAG00000021429	-	93	46.667	ENSPMAG00000001291	thumpd3	99	47.216	Petromyzon_marinus
ENSCCAG00000021429	-	99	65.996	ENSPCIG00000002049	THUMPD3	99	65.310	Phascolarctos_cinereus
ENSCCAG00000021429	-	94	52.723	ENSPFOG00000002318	thumpd3	91	51.483	Poecilia_formosa
ENSCCAG00000021429	-	94	52.723	ENSPLAG00000014804	thumpd3	91	51.483	Poecilia_latipinna
ENSCCAG00000021429	-	94	52.723	ENSPMEG00000000582	thumpd3	91	51.483	Poecilia_mexicana
ENSCCAG00000021429	-	94	52.070	ENSPREG00000009176	thumpd3	93	50.515	Poecilia_reticulata
ENSCCAG00000021429	-	100	87.873	ENSPPYG00000029461	THUMPD3	100	87.873	Pongo_abelii
ENSCCAG00000021429	-	99	61.554	ENSPPYG00000017616	-	99	61.355	Pongo_abelii
ENSCCAG00000021429	-	82	76.850	ENSPCAG00000015398	THUMPD3	99	76.850	Procavia_capensis
ENSCCAG00000021429	-	90	79.680	ENSPCOG00000023618	-	99	79.680	Propithecus_coquereli
ENSCCAG00000021429	-	100	76.342	ENSPCOG00000018095	-	100	77.734	Propithecus_coquereli
ENSCCAG00000021429	-	99	77.666	ENSPVAG00000008721	THUMPD3	99	77.666	Pteropus_vampyrus
ENSCCAG00000021429	-	94	52.863	ENSPNYG00000006918	thumpd3	90	51.410	Pundamilia_nyererei
ENSCCAG00000021429	-	92	53.468	ENSPNAG00000014936	thumpd3	90	52.863	Pygocentrus_nattereri
ENSCCAG00000021429	-	100	72.421	ENSRNOG00000006941	Thumpd3	100	72.421	Rattus_norvegicus
ENSCCAG00000021429	-	100	87.190	ENSRBIG00000035954	THUMPD3	100	87.078	Rhinopithecus_bieti
ENSCCAG00000021429	-	100	87.190	ENSRROG00000035734	THUMPD3	100	87.078	Rhinopithecus_roxellana
ENSCCAG00000021429	-	100	89.662	ENSSBOG00000023567	THUMPD3	100	89.662	Saimiri_boliviensis_boliviensis
ENSCCAG00000021429	-	99	65.854	ENSSHAG00000014467	THUMPD3	99	65.294	Sarcophilus_harrisii
ENSCCAG00000021429	-	92	55.778	ENSSFOG00015019210	thumpd3	92	55.032	Scleropages_formosus
ENSCCAG00000021429	-	96	51.059	ENSSMAG00000000609	thumpd3	95	50.968	Scophthalmus_maximus
ENSCCAG00000021429	-	95	51.452	ENSSDUG00000012179	thumpd3	96	51.452	Seriola_dumerili
ENSCCAG00000021429	-	95	51.452	ENSSLDG00000022028	thumpd3	94	51.452	Seriola_lalandi_dorsalis
ENSCCAG00000021429	-	85	71.918	ENSSARG00000002239	THUMPD3	86	68.902	Sorex_araneus
ENSCCAG00000021429	-	99	61.044	ENSSPUG00000017461	THUMPD3	99	60.870	Sphenodon_punctatus
ENSCCAG00000021429	-	94	51.762	ENSSPAG00000008345	thumpd3	91	51.579	Stegastes_partitus
ENSCCAG00000021429	-	99	75.800	ENSSSCG00000011542	THUMPD3	99	75.800	Sus_scrofa
ENSCCAG00000021429	-	91	60.938	ENSTGUG00000010440	THUMPD3	100	61.419	Taeniopygia_guttata
ENSCCAG00000021429	-	96	45.238	ENSTRUG00000004420	thumpd3	92	44.227	Takifugu_rubripes
ENSCCAG00000021429	-	94	52.539	ENSTNIG00000014627	thumpd3	98	51.380	Tetraodon_nigroviridis
ENSCCAG00000021429	-	100	74.405	ENSTBEG00000003450	THUMPD3	99	74.405	Tupaia_belangeri
ENSCCAG00000021429	-	99	77.200	ENSTTRG00000009694	THUMPD3	99	77.200	Tursiops_truncatus
ENSCCAG00000021429	-	100	77.579	ENSUAMG00000009412	THUMPD3	100	77.579	Ursus_americanus
ENSCCAG00000021429	-	100	75.000	ENSUMAG00000019241	THUMPD3	100	75.000	Ursus_maritimus
ENSCCAG00000021429	-	89	78.657	ENSVPAG00000002855	THUMPD3	100	78.657	Vicugna_pacos
ENSCCAG00000021429	-	100	77.778	ENSVVUG00000025278	THUMPD3	100	77.778	Vulpes_vulpes
ENSCCAG00000021429	-	99	52.965	ENSXETG00000001447	thumpd3	95	52.918	Xenopus_tropicalis
ENSCCAG00000021429	-	94	52.941	ENSXCOG00000000159	thumpd3	97	51.775	Xiphophorus_couchianus
ENSCCAG00000021429	-	94	52.941	ENSXMAG00000001423	thumpd3	93	51.134	Xiphophorus_maculatus