EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000021751 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: Hsh49|SAP49|SF3b49
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 5437 bases
Position: chrKV389614.1:6289049-6294485
Accession: 108316492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000008033	RRM_1	PF00076.22	3.2e-38	1	2
ENSCCAP00000008033	RRM_1	PF00076.22	3.2e-38	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000025409	-	1332	XM_017546402	ENSCCAP00000008033	443 (aa)	XP_017401891	A0A2K5PWJ1

Gene Model

Click here to download ENSCCAG00000021751's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000021751's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000021751	-	67	86.901	ENSCCAG00000019823	-	72	85.902
ENSCCAG00000021751	-	52	41.530	ENSCCAG00000031681	PABPC4L	84	41.530
ENSCCAG00000021751	-	62	39.344	ENSCCAG00000037733	-	68	38.690
ENSCCAG00000021751	-	57	36.813	ENSCCAG00000037208	PABPC3	58	36.813

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000021751	-	69	93.210	ENSG00000143368	SF3B4	100	99.474	Homo_sapiens
ENSCCAG00000021751	-	69	92.901	ENSAMEG00000010073	SF3B4	100	86.985	Ailuropoda_melanoleuca
ENSCCAG00000021751	-	52	95.238	ENSACIG00000018455	sf3b4	67	96.053	Amphilophus_citrinellus
ENSCCAG00000021751	-	59	95.437	ENSACAG00000010019	SF3B4	94	80.886	Anolis_carolinensis
ENSCCAG00000021751	-	69	93.210	ENSANAG00000031025	SF3B4	100	87.202	Aotus_nancymaae
ENSCCAG00000021751	-	54	95.000	ENSACLG00000014260	sf3b4	60	95.000	Astatotilapia_calliptera
ENSCCAG00000021751	-	54	95.417	ENSAMXG00000008282	sf3b4	60	95.417	Astyanax_mexicanus
ENSCCAG00000021751	-	69	92.901	ENSBTAG00000012495	SF3B4	100	86.985	Bos_taurus
ENSCCAG00000021751	-	63	90.604	ENSBTAG00000012793	-	91	83.824	Bos_taurus
ENSCCAG00000021751	-	68	69.663	ENSCJAG00000042351	SF3B4	100	70.461	Callithrix_jacchus
ENSCCAG00000021751	-	69	92.593	ENSCAFG00000011617	SF3B4	100	86.768	Canis_familiaris
ENSCCAG00000021751	-	69	92.593	ENSCAFG00020019775	SF3B4	100	86.768	Canis_lupus_dingo
ENSCCAG00000021751	-	69	67.500	ENSCHIG00000006654	-	50	74.129	Capra_hircus
ENSCCAG00000021751	-	69	92.901	ENSCHIG00000025663	-	100	86.985	Capra_hircus
ENSCCAG00000021751	-	69	93.210	ENSTSYG00000009295	SF3B4	100	87.202	Carlito_syrichta
ENSCCAG00000021751	-	69	92.593	ENSCPOG00000008267	SF3B4	100	86.985	Cavia_porcellus
ENSCCAG00000021751	-	69	93.210	ENSCATG00000033114	SF3B4	100	87.202	Cercocebus_atys
ENSCCAG00000021751	-	69	92.593	ENSCLAG00000015851	SF3B4	100	86.985	Chinchilla_lanigera
ENSCCAG00000021751	-	69	93.210	ENSCSAG00000018129	SF3B4	100	87.202	Chlorocebus_sabaeus
ENSCCAG00000021751	-	59	95.817	ENSCPBG00000008041	SF3B4	94	80.742	Chrysemys_picta_bellii
ENSCCAG00000021751	-	69	93.210	ENSCANG00000035579	SF3B4	100	87.202	Colobus_angolensis_palliatus
ENSCCAG00000021751	-	69	92.593	ENSCGRG00001003590	Sf3b4	100	86.768	Cricetulus_griseus_chok1gshd
ENSCCAG00000021751	-	69	92.593	ENSCGRG00000016914	Sf3b4	100	86.768	Cricetulus_griseus_crigri
ENSCCAG00000021751	-	59	86.347	ENSCVAG00000005536	sf3b4	54	99.057	Cyprinodon_variegatus
ENSCCAG00000021751	-	54	95.417	ENSDARG00000018574	sf3b4	60	95.417	Danio_rerio
ENSCCAG00000021751	-	67	76.358	ENSDNOG00000037231	-	96	67.376	Dasypus_novemcinctus
ENSCCAG00000021751	-	67	88.924	ENSDNOG00000048908	-	99	84.106	Dasypus_novemcinctus
ENSCCAG00000021751	-	69	92.901	ENSDORG00000016366	Sf3b4	100	86.985	Dipodomys_ordii
ENSCCAG00000021751	-	50	85.520	FBgn0015818	Spx	61	87.204	Drosophila_melanogaster
ENSCCAG00000021751	-	69	85.802	ENSETEG00000008963	SF3B4	76	86.420	Echinops_telfairi
ENSCCAG00000021751	-	69	92.901	ENSEASG00005001477	SF3B4	100	86.985	Equus_asinus_asinus
ENSCCAG00000021751	-	69	92.901	ENSECAG00000024737	SF3B4	100	86.985	Equus_caballus
ENSCCAG00000021751	-	54	96.250	ENSELUG00000012876	sf3b4	60	96.250	Esox_lucius
ENSCCAG00000021751	-	69	92.901	ENSFCAG00000010106	SF3B4	100	86.985	Felis_catus
ENSCCAG00000021751	-	69	92.593	ENSFDAG00000009286	SF3B4	100	86.985	Fukomys_damarensis
ENSCCAG00000021751	-	52	96.087	ENSGMOG00000002519	sf3b4	67	96.491	Gadus_morhua
ENSCCAG00000021751	-	99	79.386	ENSGALG00000013352	SF3B4	94	80.000	Gallus_gallus
ENSCCAG00000021751	-	60	91.698	ENSGAFG00000010181	sf3b4	58	96.930	Gambusia_affinis
ENSCCAG00000021751	-	59	95.817	ENSGAGG00000025055	SF3B4	82	80.510	Gopherus_agassizii
ENSCCAG00000021751	-	69	93.210	ENSGGOG00000004761	SF3B4	100	87.202	Gorilla_gorilla
ENSCCAG00000021751	-	69	72.531	ENSGGOG00000038845	-	54	88.571	Gorilla_gorilla
ENSCCAG00000021751	-	54	95.000	ENSHBUG00000002028	sf3b4	60	95.000	Haplochromis_burtoni
ENSCCAG00000021751	-	69	92.593	ENSHGLG00000012360	SF3B4	100	86.985	Heterocephalus_glaber_female
ENSCCAG00000021751	-	53	99.153	ENSHGLG00100008533	SF3B4	100	85.900	Heterocephalus_glaber_male
ENSCCAG00000021751	-	54	95.833	ENSIPUG00000012242	Sf3b4	77	82.468	Ictalurus_punctatus
ENSCCAG00000021751	-	69	92.901	ENSSTOG00000000684	-	100	86.985	Ictidomys_tridecemlineatus
ENSCCAG00000021751	-	68	75.000	ENSJJAG00000022500	Sf3b4	95	75.862	Jaculus_jaculus
ENSCCAG00000021751	-	53	95.359	ENSKMAG00000008154	sf3b4	58	97.368	Kryptolebias_marmoratus
ENSCCAG00000021751	-	52	96.983	ENSLBEG00000026818	sf3b4	57	97.368	Labrus_bergylta
ENSCCAG00000021751	-	55	94.650	ENSLACG00000004436	SF3B4	79	90.559	Latimeria_chalumnae
ENSCCAG00000021751	-	55	95.062	ENSLOCG00000009048	sf3b4	75	84.444	Lepisosteus_oculatus
ENSCCAG00000021751	-	69	93.231	ENSLAFG00000008531	SF3B4	100	86.797	Loxodonta_africana
ENSCCAG00000021751	-	68	74.667	ENSMFAG00000039067	-	76	70.164	Macaca_fascicularis
ENSCCAG00000021751	-	69	93.210	ENSMFAG00000042395	SF3B4	100	87.202	Macaca_fascicularis
ENSCCAG00000021751	-	69	93.210	ENSMMUG00000007256	SF3B4	100	87.202	Macaca_mulatta
ENSCCAG00000021751	-	68	74.333	ENSMNEG00000031526	-	76	69.836	Macaca_nemestrina
ENSCCAG00000021751	-	69	93.210	ENSMNEG00000031839	SF3B4	100	87.202	Macaca_nemestrina
ENSCCAG00000021751	-	69	93.210	ENSMLEG00000038667	SF3B4	100	87.202	Mandrillus_leucophaeus
ENSCCAG00000021751	-	54	96.250	ENSMAMG00000014692	sf3b4	60	96.250	Mastacembelus_armatus
ENSCCAG00000021751	-	54	95.000	ENSMZEG00005026741	sf3b4	60	95.000	Maylandia_zebra
ENSCCAG00000021751	-	99	78.681	ENSMGAG00000000653	SF3B4	94	79.720	Meleagris_gallopavo
ENSCCAG00000021751	-	69	92.593	ENSMAUG00000015266	Sf3b4	100	86.768	Mesocricetus_auratus
ENSCCAG00000021751	-	69	92.901	ENSMICG00000044961	SF3B4	100	86.985	Microcebus_murinus
ENSCCAG00000021751	-	69	92.593	ENSMOCG00000013658	-	100	86.768	Microtus_ochrogaster
ENSCCAG00000021751	-	67	90.794	ENSMOCG00000014155	-	78	90.794	Microtus_ochrogaster
ENSCCAG00000021751	-	52	96.957	ENSMMOG00000018032	sf3b4	58	96.930	Mola_mola
ENSCCAG00000021751	-	69	92.593	ENSMODG00000018767	SF3B4	100	86.334	Monodelphis_domestica
ENSCCAG00000021751	-	51	96.916	ENSMALG00000006174	sf3b4	57	96.491	Monopterus_albus
ENSCCAG00000021751	-	69	92.284	MGP_CAROLIEiJ_G0025365	Sf3b4	100	86.551	Mus_caroli
ENSCCAG00000021751	-	69	92.593	ENSMUSG00000068856	Sf3b4	100	86.768	Mus_musculus
ENSCCAG00000021751	-	69	92.593	MGP_PahariEiJ_G0026809	Sf3b4	100	86.768	Mus_pahari
ENSCCAG00000021751	-	69	92.593	MGP_SPRETEiJ_G0026309	Sf3b4	100	86.768	Mus_spretus
ENSCCAG00000021751	-	69	92.901	ENSMPUG00000005563	SF3B4	100	86.985	Mustela_putorius_furo
ENSCCAG00000021751	-	69	92.593	ENSMLUG00000010789	SF3B4	100	86.768	Myotis_lucifugus
ENSCCAG00000021751	-	69	93.210	ENSNGAG00000016337	Sf3b4	100	86.768	Nannospalax_galili
ENSCCAG00000021751	-	54	95.417	ENSNBRG00000013865	sf3b4	60	95.417	Neolamprologus_brichardi
ENSCCAG00000021751	-	100	67.028	ENSNLEG00000000537	-	95	68.421	Nomascus_leucogenys
ENSCCAG00000021751	-	82	99.390	ENSMEUG00000003272	SF3B4	82	99.390	Notamacropus_eugenii
ENSCCAG00000021751	-	51	94.737	ENSOPRG00000010808	SF3B4	99	82.353	Ochotona_princeps
ENSCCAG00000021751	-	76	77.581	ENSODEG00000003597	-	79	81.388	Octodon_degus
ENSCCAG00000021751	-	78	67.671	ENSODEG00000008916	-	55	75.943	Octodon_degus
ENSCCAG00000021751	-	53	94.515	ENSONIG00000002730	sf3b4	57	96.930	Oreochromis_niloticus
ENSCCAG00000021751	-	59	71.321	ENSOANG00000004768	-	50	80.841	Ornithorhynchus_anatinus
ENSCCAG00000021751	-	69	92.901	ENSOCUG00000004614	SF3B4	100	86.985	Oryctolagus_cuniculus
ENSCCAG00000021751	-	52	96.121	ENSORLG00000003062	sf3b4	59	96.930	Oryzias_latipes
ENSCCAG00000021751	-	52	96.121	ENSORLG00020000687	sf3b4	57	96.930	Oryzias_latipes_hni
ENSCCAG00000021751	-	52	96.121	ENSORLG00015010989	sf3b4	57	96.930	Oryzias_latipes_hsok
ENSCCAG00000021751	-	52	96.121	ENSOMEG00000013694	sf3b4	57	96.930	Oryzias_melastigma
ENSCCAG00000021751	-	69	92.901	ENSOGAG00000006265	SF3B4	100	86.985	Otolemur_garnettii
ENSCCAG00000021751	-	78	75.209	ENSOARG00000007368	-	97	59.954	Ovis_aries
ENSCCAG00000021751	-	69	92.901	ENSOARG00000020718	-	100	86.985	Ovis_aries
ENSCCAG00000021751	-	69	93.210	ENSPPAG00000040904	SF3B4	100	87.202	Pan_paniscus
ENSCCAG00000021751	-	69	82.769	ENSPPAG00000030024	-	78	77.469	Pan_paniscus
ENSCCAG00000021751	-	69	92.901	ENSPPRG00000007384	SF3B4	100	86.985	Panthera_pardus
ENSCCAG00000021751	-	69	92.901	ENSPTIG00000014530	SF3B4	100	86.551	Panthera_tigris_altaica
ENSCCAG00000021751	-	69	93.210	ENSPTRG00000001243	SF3B4	100	87.202	Pan_troglodytes
ENSCCAG00000021751	-	69	84.665	ENSPTRG00000049727	-	78	83.923	Pan_troglodytes
ENSCCAG00000021751	-	69	93.210	ENSPANG00000005126	SF3B4	100	87.202	Papio_anubis
ENSCCAG00000021751	-	53	96.567	ENSPKIG00000020669	sf3b4	57	97.368	Paramormyrops_kingsleyae
ENSCCAG00000021751	-	59	78.113	ENSPSIG00000009565	SF3B4	88	77.491	Pelodiscus_sinensis
ENSCCAG00000021751	-	69	92.593	ENSPEMG00000017568	Sf3b4	100	86.768	Peromyscus_maniculatus_bairdii
ENSCCAG00000021751	-	58	87.938	ENSPMAG00000007842	-	50	94.340	Petromyzon_marinus
ENSCCAG00000021751	-	69	92.593	ENSPCIG00000008765	SF3B4	100	86.334	Phascolarctos_cinereus
ENSCCAG00000021751	-	53	94.515	ENSPLAG00000001401	sf3b4	63	96.491	Poecilia_latipinna
ENSCCAG00000021751	-	53	94.515	ENSPREG00000011076	sf3b4	53	99.057	Poecilia_reticulata
ENSCCAG00000021751	-	63	74.643	ENSPCAG00000000392	SF3B4	50	95.673	Procavia_capensis
ENSCCAG00000021751	-	69	92.901	ENSPCOG00000015399	SF3B4	100	86.985	Propithecus_coquereli
ENSCCAG00000021751	-	69	92.901	ENSPVAG00000014171	SF3B4	100	86.985	Pteropus_vampyrus
ENSCCAG00000021751	-	54	95.000	ENSPNYG00000012700	sf3b4	60	95.000	Pundamilia_nyererei
ENSCCAG00000021751	-	54	95.833	ENSPNAG00000000686	sf3b4	61	95.833	Pygocentrus_nattereri
ENSCCAG00000021751	-	69	92.593	ENSRNOG00000021181	Sf3b4	100	86.768	Rattus_norvegicus
ENSCCAG00000021751	-	69	93.210	ENSRBIG00000043392	SF3B4	100	87.202	Rhinopithecus_bieti
ENSCCAG00000021751	-	69	93.210	ENSRROG00000029366	SF3B4	100	87.202	Rhinopithecus_roxellana
ENSCCAG00000021751	-	69	92.901	ENSSBOG00000012310	-	100	86.985	Saimiri_boliviensis_boliviensis
ENSCCAG00000021751	-	68	73.668	ENSSBOG00000025174	-	73	73.994	Saimiri_boliviensis_boliviensis
ENSCCAG00000021751	-	69	89.198	ENSSHAG00000004043	SF3B4	100	84.928	Sarcophilus_harrisii
ENSCCAG00000021751	-	53	95.781	ENSSFOG00015008864	sf3b4	56	97.368	Scleropages_formosus
ENSCCAG00000021751	-	54	96.250	ENSSLDG00000014226	sf3b4	60	96.250	Seriola_lalandi_dorsalis
ENSCCAG00000021751	-	99	73.077	ENSSPUG00000001028	SF3B4	93	75.721	Sphenodon_punctatus
ENSCCAG00000021751	-	78	61.864	ENSSSCG00000039440	-	79	61.111	Sus_scrofa
ENSCCAG00000021751	-	69	93.519	ENSSSCG00000006665	-	100	86.985	Sus_scrofa
ENSCCAG00000021751	-	53	96.186	ENSTGUG00000004470	SF3B4	90	97.368	Taeniopygia_guttata
ENSCCAG00000021751	-	51	96.035	ENSTRUG00000004516	sf3b4	57	95.614	Takifugu_rubripes
ENSCCAG00000021751	-	52	96.087	ENSTNIG00000009156	sf3b4	58	96.491	Tetraodon_nigroviridis
ENSCCAG00000021751	-	69	92.901	ENSTTRG00000005217	SF3B4	100	86.985	Tursiops_truncatus
ENSCCAG00000021751	-	69	92.901	ENSUAMG00000022468	SF3B4	100	86.985	Ursus_americanus
ENSCCAG00000021751	-	69	92.284	ENSUMAG00000003802	SF3B4	100	86.334	Ursus_maritimus
ENSCCAG00000021751	-	66	92.628	ENSVPAG00000008152	SF3B4	100	86.637	Vicugna_pacos
ENSCCAG00000021751	-	58	96.124	ENSVVUG00000022697	-	58	95.290	Vulpes_vulpes
ENSCCAG00000021751	-	68	92.476	ENSVVUG00000007732	-	95	79.493	Vulpes_vulpes