EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000021844 (Gene tree)
Gene ID: 108317284
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 26415 bases
Position: chrKV389625.1:4677337-4703751
Accession: 108317284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000008247	RTC	PF01137.21	1.5e-86	1	1
ENSCCAP00000008253	RTC	PF01137.21	2.7e-85	1	1
ENSCCAP00000008275	RTC	PF01137.21	1.9e-80	1	1
ENSCCAP00000008253	RTC_insert	PF05189.13	6.8e-25	1	1
ENSCCAP00000008247	RTC_insert	PF05189.13	7.8e-25	1	1
ENSCCAP00000008275	RTC_insert	PF05189.13	8.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000025651	RTCA-203	1140	-	ENSCCAP00000008275	379 (aa)	-	A0A2K5PX93
ENSCCAT00000025629	RTCA-202	1414	-	ENSCCAP00000008253	336 (aa)	-	A0A2K5PX57
ENSCCAT00000025623	RTCA-201	2594	XM_017547630	ENSCCAP00000008247	366 (aa)	XP_017403119	A0A2K5PXC9

Gene Model

Click here to download ENSCCAG00000021844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000021844's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000021844	RTCA	100	97.541	ENSG00000137996	RTCA	100	100.000	Homo_sapiens
ENSCCAG00000021844	RTCA	98	72.561	ENSAPOG00000001345	rtca	98	71.468	Acanthochromis_polyacanthus
ENSCCAG00000021844	RTCA	73	93.309	ENSAMEG00000008855	RTCA	100	93.309	Ailuropoda_melanoleuca
ENSCCAG00000021844	RTCA	98	72.866	ENSACIG00000019643	rtca	99	71.468	Amphilophus_citrinellus
ENSCCAG00000021844	RTCA	99	71.772	ENSAOCG00000014979	rtca	99	70.765	Amphiprion_ocellaris
ENSCCAG00000021844	RTCA	99	71.772	ENSAPEG00000006945	rtca	99	70.765	Amphiprion_percula
ENSCCAG00000021844	RTCA	96	71.510	ENSATEG00000006315	rtca	96	71.510	Anabas_testudineus
ENSCCAG00000021844	RTCA	96	79.096	ENSAPLG00000015430	RTCA	100	79.096	Anas_platyrhynchos
ENSCCAG00000021844	RTCA	100	98.153	ENSANAG00000025446	RTCA	100	98.153	Aotus_nancymaae
ENSCCAG00000021844	RTCA	100	69.672	ENSACLG00000020770	rtca	99	69.672	Astatotilapia_calliptera
ENSCCAG00000021844	RTCA	100	73.224	ENSAMXG00000043271	rtca	100	73.224	Astyanax_mexicanus
ENSCCAG00000021844	RTCA	100	94.536	ENSBTAG00000006321	RTCA	100	94.536	Bos_taurus
ENSCCAG00000021844	RTCA	100	98.634	ENSCJAG00000003398	RTCA	100	98.634	Callithrix_jacchus
ENSCCAG00000021844	RTCA	100	94.262	ENSCAFG00000020010	RTCA	68	94.262	Canis_familiaris
ENSCCAG00000021844	RTCA	100	94.262	ENSCAFG00020011528	RTCA	57	94.262	Canis_lupus_dingo
ENSCCAG00000021844	RTCA	100	94.262	ENSCHIG00000018937	RTCA	100	94.262	Capra_hircus
ENSCCAG00000021844	RTCA	100	92.350	ENSTSYG00000011305	RTCA	100	92.350	Carlito_syrichta
ENSCCAG00000021844	RTCA	100	96.834	ENSCATG00000019364	RTCA	100	97.087	Cercocebus_atys
ENSCCAG00000021844	RTCA	87	94.953	ENSCLAG00000006125	RTCA	100	94.953	Chinchilla_lanigera
ENSCCAG00000021844	RTCA	100	97.814	ENSCSAG00000001509	RTCA	100	97.814	Chlorocebus_sabaeus
ENSCCAG00000021844	RTCA	100	92.896	ENSCHOG00000005211	RTCA	100	92.896	Choloepus_hoffmanni
ENSCCAG00000021844	RTCA	99	84.084	ENSCPBG00000026658	RTCA	100	82.514	Chrysemys_picta_bellii
ENSCCAG00000021844	RTCA	98	55.679	ENSCING00000007875	-	98	55.679	Ciona_intestinalis
ENSCCAG00000021844	RTCA	98	53.889	ENSCSAVG00000007269	-	98	53.889	Ciona_savignyi
ENSCCAG00000021844	RTCA	100	97.541	ENSCANG00000040106	RTCA	100	97.541	Colobus_angolensis_palliatus
ENSCCAG00000021844	RTCA	73	89.963	ENSCGRG00001013163	Rtca	85	89.963	Cricetulus_griseus_chok1gshd
ENSCCAG00000021844	RTCA	99	69.880	ENSCSEG00000000530	rtca	98	68.219	Cynoglossus_semilaevis
ENSCCAG00000021844	RTCA	100	58.470	ENSCVAG00000021809	rtca	100	58.470	Cyprinodon_variegatus
ENSCCAG00000021844	RTCA	99	74.924	ENSDARG00000002215	rtca	100	73.497	Danio_rerio
ENSCCAG00000021844	RTCA	100	93.443	ENSDNOG00000000456	RTCA	100	93.443	Dasypus_novemcinctus
ENSCCAG00000021844	RTCA	100	91.803	ENSDORG00000005448	Rtca	100	91.803	Dipodomys_ordii
ENSCCAG00000021844	RTCA	97	39.571	FBgn0025630	Rtca	98	37.989	Drosophila_melanogaster
ENSCCAG00000021844	RTCA	98	55.455	ENSEBUG00000008556	rtca	97	54.237	Eptatretus_burgeri
ENSCCAG00000021844	RTCA	100	93.989	ENSEASG00005015926	RTCA	100	93.989	Equus_asinus_asinus
ENSCCAG00000021844	RTCA	100	93.989	ENSECAG00000019831	RTCA	100	93.989	Equus_caballus
ENSCCAG00000021844	RTCA	99	81.792	ENSEEUG00000001165	RTCA	100	81.792	Erinaceus_europaeus
ENSCCAG00000021844	RTCA	99	71.745	ENSELUG00000003741	rtca	99	71.745	Esox_lucius
ENSCCAG00000021844	RTCA	100	94.262	ENSFCAG00000024460	RTCA	100	94.262	Felis_catus
ENSCCAG00000021844	RTCA	99	82.583	ENSFALG00000002443	RTCA	90	82.583	Ficedula_albicollis
ENSCCAG00000021844	RTCA	98	74.862	ENSFDAG00000016084	-	100	74.862	Fukomys_damarensis
ENSCCAG00000021844	RTCA	100	95.082	ENSFDAG00000012070	-	100	95.082	Fukomys_damarensis
ENSCCAG00000021844	RTCA	74	61.943	ENSFHEG00000002868	rtca	96	66.814	Fundulus_heteroclitus
ENSCCAG00000021844	RTCA	99	71.471	ENSGMOG00000013264	rtca	100	69.399	Gadus_morhua
ENSCCAG00000021844	RTCA	100	82.240	ENSGALG00000005277	RTCA	100	82.240	Gallus_gallus
ENSCCAG00000021844	RTCA	100	71.038	ENSGAFG00000011853	rtca	99	71.038	Gambusia_affinis
ENSCCAG00000021844	RTCA	99	71.171	ENSGACG00000013497	rtca	100	69.399	Gasterosteus_aculeatus
ENSCCAG00000021844	RTCA	87	83.618	ENSGAGG00000023306	RTCA	100	83.618	Gopherus_agassizii
ENSCCAG00000021844	RTCA	100	97.541	ENSGGOG00000009546	-	100	97.541	Gorilla_gorilla
ENSCCAG00000021844	RTCA	100	96.721	ENSGGOG00000044018	-	100	96.721	Gorilla_gorilla
ENSCCAG00000021844	RTCA	100	69.399	ENSHBUG00000002114	rtca	99	69.399	Haplochromis_burtoni
ENSCCAG00000021844	RTCA	100	93.989	ENSHGLG00000002617	RTCA	100	93.989	Heterocephalus_glaber_female
ENSCCAG00000021844	RTCA	100	93.989	ENSHGLG00100006056	RTCA	100	93.989	Heterocephalus_glaber_male
ENSCCAG00000021844	RTCA	99	65.766	ENSHCOG00000020628	rtca	89	63.934	Hippocampus_comes
ENSCCAG00000021844	RTCA	99	75.075	ENSIPUG00000024803	rtca	100	73.497	Ictalurus_punctatus
ENSCCAG00000021844	RTCA	100	87.432	ENSSTOG00000013528	-	100	87.432	Ictidomys_tridecemlineatus
ENSCCAG00000021844	RTCA	100	82.289	ENSSTOG00000033099	-	100	82.289	Ictidomys_tridecemlineatus
ENSCCAG00000021844	RTCA	100	66.393	ENSJJAG00000016178	Rtca	100	66.393	Jaculus_jaculus
ENSCCAG00000021844	RTCA	98	73.171	ENSKMAG00000006651	rtca	98	72.022	Kryptolebias_marmoratus
ENSCCAG00000021844	RTCA	88	68.536	ENSLBEG00000002448	-	99	68.536	Labrus_bergylta
ENSCCAG00000021844	RTCA	98	70.732	ENSLBEG00000028971	rtca	99	69.252	Labrus_bergylta
ENSCCAG00000021844	RTCA	99	78.679	ENSLACG00000013666	RTCA	100	77.322	Latimeria_chalumnae
ENSCCAG00000021844	RTCA	99	74.174	ENSLOCG00000000093	rtca	99	72.404	Lepisosteus_oculatus
ENSCCAG00000021844	RTCA	100	92.350	ENSLAFG00000001473	RTCA	100	92.350	Loxodonta_africana
ENSCCAG00000021844	RTCA	100	97.814	ENSMFAG00000034132	RTCA	100	97.814	Macaca_fascicularis
ENSCCAG00000021844	RTCA	100	97.268	ENSMMUG00000019105	RTCA	100	97.268	Macaca_mulatta
ENSCCAG00000021844	RTCA	84	97.411	ENSMNEG00000037163	RTCA	100	97.411	Macaca_nemestrina
ENSCCAG00000021844	RTCA	100	80.055	ENSMLEG00000042151	RTCA	100	80.055	Mandrillus_leucophaeus
ENSCCAG00000021844	RTCA	100	72.951	ENSMAMG00000016536	rtca	100	72.951	Mastacembelus_armatus
ENSCCAG00000021844	RTCA	100	69.672	ENSMZEG00005017945	rtca	99	69.672	Maylandia_zebra
ENSCCAG00000021844	RTCA	87	80.564	ENSMGAG00000006892	RTCA	99	80.564	Meleagris_gallopavo
ENSCCAG00000021844	RTCA	100	91.257	ENSMAUG00000008488	Rtca	100	91.257	Mesocricetus_auratus
ENSCCAG00000021844	RTCA	84	95.793	ENSMICG00000008643	RTCA	100	95.793	Microcebus_murinus
ENSCCAG00000021844	RTCA	100	91.257	ENSMOCG00000016660	Rtca	100	91.257	Microtus_ochrogaster
ENSCCAG00000021844	RTCA	82	73.551	ENSMMOG00000007750	rtca	100	71.197	Mola_mola
ENSCCAG00000021844	RTCA	99	90.691	ENSMODG00000003557	RTCA	100	89.617	Monodelphis_domestica
ENSCCAG00000021844	RTCA	100	72.404	ENSMALG00000020844	rtca	100	72.404	Monopterus_albus
ENSCCAG00000021844	RTCA	100	91.257	MGP_CAROLIEiJ_G0025565	Rtca	100	91.257	Mus_caroli
ENSCCAG00000021844	RTCA	99	91.892	ENSMUSG00000000339	Rtca	100	90.845	Mus_musculus
ENSCCAG00000021844	RTCA	100	90.984	MGP_PahariEiJ_G0027011	Rtca	100	90.984	Mus_pahari
ENSCCAG00000021844	RTCA	100	91.530	MGP_SPRETEiJ_G0026515	Rtca	100	91.549	Mus_spretus
ENSCCAG00000021844	RTCA	100	94.809	ENSMPUG00000012119	RTCA	100	94.809	Mustela_putorius_furo
ENSCCAG00000021844	RTCA	100	87.466	ENSMLUG00000009922	RTCA	100	87.466	Myotis_lucifugus
ENSCCAG00000021844	RTCA	100	91.530	ENSNGAG00000011540	Rtca	99	91.530	Nannospalax_galili
ENSCCAG00000021844	RTCA	100	69.672	ENSNBRG00000003062	rtca	99	69.672	Neolamprologus_brichardi
ENSCCAG00000021844	RTCA	100	97.541	ENSNLEG00000031426	RTCA	100	97.541	Nomascus_leucogenys
ENSCCAG00000021844	RTCA	59	93.902	ENSMEUG00000010030	-	77	75.758	Notamacropus_eugenii
ENSCCAG00000021844	RTCA	73	86.989	ENSOPRG00000012092	RTCA	71	86.989	Ochotona_princeps
ENSCCAG00000021844	RTCA	95	93.966	ENSODEG00000006990	RTCA	96	94.017	Octodon_degus
ENSCCAG00000021844	RTCA	100	69.672	ENSONIG00000007753	rtca	99	69.672	Oreochromis_niloticus
ENSCCAG00000021844	RTCA	87	86.120	ENSOANG00000012055	RTCA	98	86.120	Ornithorhynchus_anatinus
ENSCCAG00000021844	RTCA	100	94.809	ENSOCUG00000014247	RTCA	100	94.809	Oryctolagus_cuniculus
ENSCCAG00000021844	RTCA	100	70.219	ENSORLG00000013605	rtca	100	70.219	Oryzias_latipes
ENSCCAG00000021844	RTCA	100	70.219	ENSORLG00020001904	rtca	100	70.219	Oryzias_latipes_hni
ENSCCAG00000021844	RTCA	100	70.219	ENSORLG00015021064	rtca	100	70.219	Oryzias_latipes_hsok
ENSCCAG00000021844	RTCA	99	71.772	ENSOMEG00000000756	rtca	100	70.765	Oryzias_melastigma
ENSCCAG00000021844	RTCA	100	84.426	ENSOGAG00000005627	RTCA	100	84.426	Otolemur_garnettii
ENSCCAG00000021844	RTCA	87	93.082	ENSOARG00000018122	RTCA	100	93.082	Ovis_aries
ENSCCAG00000021844	RTCA	100	96.306	ENSPPAG00000035119	RTCA	100	96.764	Pan_paniscus
ENSCCAG00000021844	RTCA	100	94.262	ENSPPRG00000000350	RTCA	100	94.262	Panthera_pardus
ENSCCAG00000021844	RTCA	100	93.989	ENSPTIG00000012816	RTCA	100	93.989	Panthera_tigris_altaica
ENSCCAG00000021844	RTCA	100	96.306	ENSPTRG00000001004	RTCA	100	96.764	Pan_troglodytes
ENSCCAG00000021844	RTCA	100	96.995	ENSPANG00000000346	RTCA	100	96.995	Papio_anubis
ENSCCAG00000021844	RTCA	99	75.529	ENSPKIG00000001653	rtca	100	73.770	Paramormyrops_kingsleyae
ENSCCAG00000021844	RTCA	99	84.084	ENSPSIG00000011408	RTCA	100	83.060	Pelodiscus_sinensis
ENSCCAG00000021844	RTCA	100	90.437	ENSPEMG00000018582	Rtca	100	90.437	Peromyscus_maniculatus_bairdii
ENSCCAG00000021844	RTCA	100	58.311	ENSPMAG00000009110	rtca	100	58.311	Petromyzon_marinus
ENSCCAG00000021844	RTCA	99	90.991	ENSPCIG00000007684	RTCA	100	89.891	Phascolarctos_cinereus
ENSCCAG00000021844	RTCA	100	71.117	ENSPFOG00000004824	rtca	100	71.117	Poecilia_formosa
ENSCCAG00000021844	RTCA	100	71.311	ENSPLAG00000011753	rtca	99	71.311	Poecilia_latipinna
ENSCCAG00000021844	RTCA	100	71.311	ENSPMEG00000020469	rtca	99	71.311	Poecilia_mexicana
ENSCCAG00000021844	RTCA	100	72.131	ENSPREG00000001365	rtca	99	72.131	Poecilia_reticulata
ENSCCAG00000021844	RTCA	100	97.541	ENSPPYG00000001115	RTCA	100	97.541	Pongo_abelii
ENSCCAG00000021844	RTCA	100	89.891	ENSPCAG00000005076	RTCA	100	89.891	Procavia_capensis
ENSCCAG00000021844	RTCA	100	95.902	ENSPCOG00000005603	RTCA	100	95.902	Propithecus_coquereli
ENSCCAG00000021844	RTCA	100	91.821	ENSPVAG00000009478	RTCA	100	91.821	Pteropus_vampyrus
ENSCCAG00000021844	RTCA	100	69.672	ENSPNYG00000004722	rtca	99	69.672	Pundamilia_nyererei
ENSCCAG00000021844	RTCA	99	74.775	ENSPNAG00000022270	rtca	100	73.770	Pygocentrus_nattereri
ENSCCAG00000021844	RTCA	100	90.710	ENSRNOG00000014575	Rtca	100	90.710	Rattus_norvegicus
ENSCCAG00000021844	RTCA	100	96.306	ENSRBIG00000041180	RTCA	100	96.440	Rhinopithecus_bieti
ENSCCAG00000021844	RTCA	100	96.995	ENSRROG00000024929	RTCA	100	96.995	Rhinopithecus_roxellana
ENSCCAG00000021844	RTCA	100	97.814	ENSSBOG00000028626	RTCA	100	97.814	Saimiri_boliviensis_boliviensis
ENSCCAG00000021844	RTCA	100	90.164	ENSSHAG00000001758	RTCA	100	90.164	Sarcophilus_harrisii
ENSCCAG00000021844	RTCA	97	70.642	ENSSMAG00000014680	rtca	97	69.444	Scophthalmus_maximus
ENSCCAG00000021844	RTCA	97	72.783	ENSSDUG00000015585	rtca	97	71.389	Seriola_dumerili
ENSCCAG00000021844	RTCA	95	73.270	ENSSLDG00000018985	rtca	95	71.795	Seriola_lalandi_dorsalis
ENSCCAG00000021844	RTCA	87	85.804	ENSSARG00000013993	RTCA	100	85.804	Sorex_araneus
ENSCCAG00000021844	RTCA	100	69.945	ENSSPAG00000011938	rtca	99	69.945	Stegastes_partitus
ENSCCAG00000021844	RTCA	100	93.989	ENSSSCG00000006865	RTCA	100	93.989	Sus_scrofa
ENSCCAG00000021844	RTCA	100	82.240	ENSTGUG00000005154	RTCA	100	82.240	Taeniopygia_guttata
ENSCCAG00000021844	RTCA	99	71.772	ENSTRUG00000008799	rtca	100	70.765	Takifugu_rubripes
ENSCCAG00000021844	RTCA	99	72.072	ENSTNIG00000004725	rtca	100	70.765	Tetraodon_nigroviridis
ENSCCAG00000021844	RTCA	60	90.909	ENSTBEG00000000943	RTCA	64	98.039	Tupaia_belangeri
ENSCCAG00000021844	RTCA	100	92.612	ENSTTRG00000015327	RTCA	100	92.612	Tursiops_truncatus
ENSCCAG00000021844	RTCA	99	93.994	ENSUAMG00000017265	RTCA	94	93.994	Ursus_americanus
ENSCCAG00000021844	RTCA	100	93.716	ENSUMAG00000007881	RTCA	100	93.716	Ursus_maritimus
ENSCCAG00000021844	RTCA	87	84.227	ENSVPAG00000001039	RTCA	87	83.939	Vicugna_pacos
ENSCCAG00000021844	RTCA	100	93.989	ENSVVUG00000022041	RTCA	68	93.989	Vulpes_vulpes
ENSCCAG00000021844	RTCA	99	65.672	ENSXETG00000031661	RTCA	99	64.850	Xenopus_tropicalis
ENSCCAG00000021844	RTCA	100	62.022	ENSXCOG00000008002	rtca	100	62.022	Xiphophorus_couchianus
ENSCCAG00000021844	RTCA	100	71.311	ENSXMAG00000005482	rtca	99	71.311	Xiphophorus_maculatus