EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000021948 (Gene tree)
Gene ID: 108310599
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 168201 bases
Position: chrKV389531.1:5882792-6050992
Accession: 108310599
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000008557	La	PF05383.17	5.4e-22	1	1
ENSCCAP00000008560	La	PF05383.17	5.6e-22	1	1
ENSCCAP00000008551	La	PF05383.17	1.2e-21	1	1
ENSCCAP00000008556	La	PF05383.17	1.2e-21	1	1
ENSCCAP00000008544	La	PF05383.17	1.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000025935	LARP1B-204	2707	XM_017537658	ENSCCAP00000008556	518 (aa)	XP_017393147	A0A2K5PY73
ENSCCAT00000025936	LARP1B-205	2464	XM_017537661	ENSCCAP00000008557	335 (aa)	XP_017393150	A0A2K5PY77
ENSCCAT00000025930	LARP1B-203	2095	XM_017537663	ENSCCAP00000008551	518 (aa)	XP_017393152	A0A2K5PY73
ENSCCAT00000025922	LARP1B-202	2742	XM_017537656	ENSCCAP00000008544	913 (aa)	XP_017393145	A0A2K5PY27
ENSCCAT00000025939	LARP1B-206	1029	-	ENSCCAP00000008560	343 (aa)	-	A0A2K5PY36
ENSCCAT00000025833	LARP1B-201	2714	-	ENSCCAP00000008455	505 (aa)	-	A0A2K5PXS8

Gene Model

Click here to download ENSCCAG00000021948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000021948's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000021948	LARP1B	95	60.762	ENSCCAG00000025201	LARP1	87	59.803

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000021948	LARP1B	100	96.525	ENSG00000138709	LARP1B	100	96.525	Homo_sapiens
ENSCCAG00000021948	LARP1B	97	56.865	ENSAPOG00000020101	larp1b	84	56.602	Acanthochromis_polyacanthus
ENSCCAG00000021948	LARP1B	99	93.413	ENSAMEG00000002748	LARP1B	99	93.413	Ailuropoda_melanoleuca
ENSCCAG00000021948	LARP1B	97	55.275	ENSACIG00000023890	larp1b	83	53.797	Amphilophus_citrinellus
ENSCCAG00000021948	LARP1B	97	48.767	ENSAOCG00000014268	larp1b	84	54.916	Amphiprion_ocellaris
ENSCCAG00000021948	LARP1B	98	57.468	ENSAPEG00000004126	larp1b	84	56.734	Amphiprion_percula
ENSCCAG00000021948	LARP1B	98	56.602	ENSATEG00000017849	larp1b	84	56.204	Anabas_testudineus
ENSCCAG00000021948	LARP1B	96	68.427	ENSAPLG00000010129	LARP1B	98	68.357	Anas_platyrhynchos
ENSCCAG00000021948	LARP1B	98	75.455	ENSACAG00000011338	LARP1B	86	77.700	Anolis_carolinensis
ENSCCAG00000021948	LARP1B	98	89.216	ENSANAG00000034618	LARP1B	100	84.638	Aotus_nancymaae
ENSCCAG00000021948	LARP1B	97	56.196	ENSACLG00000011948	larp1b	84	55.238	Astatotilapia_calliptera
ENSCCAG00000021948	LARP1B	83	57.534	ENSAMXG00000006805	larp1b	81	53.198	Astyanax_mexicanus
ENSCCAG00000021948	LARP1B	98	92.121	ENSBTAG00000012135	LARP1B	99	88.269	Bos_taurus
ENSCCAG00000021948	LARP1B	100	98.456	ENSCJAG00000003338	LARP1B	100	98.456	Callithrix_jacchus
ENSCCAG00000021948	LARP1B	98	93.313	ENSCAFG00000003831	LARP1B	100	90.403	Canis_familiaris
ENSCCAG00000021948	LARP1B	99	93.413	ENSCAFG00020018899	LARP1B	99	93.413	Canis_lupus_dingo
ENSCCAG00000021948	LARP1B	99	90.448	ENSCHIG00000023144	LARP1B	99	90.448	Capra_hircus
ENSCCAG00000021948	LARP1B	98	86.018	ENSTSYG00000002037	-	97	83.478	Carlito_syrichta
ENSCCAG00000021948	LARP1B	76	92.793	ENSCPOG00000034668	-	93	92.793	Cavia_porcellus
ENSCCAG00000021948	LARP1B	100	95.174	ENSCATG00000013541	LARP1B	100	95.174	Cercocebus_atys
ENSCCAG00000021948	LARP1B	99	88.024	ENSCLAG00000006448	-	99	88.024	Chinchilla_lanigera
ENSCCAG00000021948	LARP1B	100	95.633	ENSCSAG00000003582	LARP1B	99	95.738	Chlorocebus_sabaeus
ENSCCAG00000021948	LARP1B	99	80.635	ENSCHOG00000005354	LARP1B	99	80.525	Choloepus_hoffmanni
ENSCCAG00000021948	LARP1B	99	76.747	ENSCPBG00000017480	LARP1B	86	76.965	Chrysemys_picta_bellii
ENSCCAG00000021948	LARP1B	100	90.217	ENSCANG00000026958	LARP1B	100	90.217	Colobus_angolensis_palliatus
ENSCCAG00000021948	LARP1B	99	91.018	ENSCGRG00001004660	-	99	91.018	Cricetulus_griseus_chok1gshd
ENSCCAG00000021948	LARP1B	99	90.719	ENSCGRG00000001914	-	99	90.719	Cricetulus_griseus_crigri
ENSCCAG00000021948	LARP1B	96	53.175	ENSCSEG00000013519	larp1b	85	54.206	Cynoglossus_semilaevis
ENSCCAG00000021948	LARP1B	97	55.819	ENSCVAG00000005046	larp1b	84	55.380	Cyprinodon_variegatus
ENSCCAG00000021948	LARP1B	98	53.714	ENSDARG00000061169	larp1b	79	55.027	Danio_rerio
ENSCCAG00000021948	LARP1B	98	90.881	ENSDNOG00000018765	-	100	88.454	Dasypus_novemcinctus
ENSCCAG00000021948	LARP1B	88	84.034	ENSETEG00000012497	LARP1B	88	84.034	Echinops_telfairi
ENSCCAG00000021948	LARP1B	94	51.784	ENSEBUG00000003668	larp1b	87	52.052	Eptatretus_burgeri
ENSCCAG00000021948	LARP1B	100	93.731	ENSEASG00005018106	LARP1B	100	93.731	Equus_asinus_asinus
ENSCCAG00000021948	LARP1B	98	93.617	ENSECAG00000001088	LARP1B	81	88.415	Equus_caballus
ENSCCAG00000021948	LARP1B	70	53.707	ENSELUG00000023774	larp1b	72	53.858	Esox_lucius
ENSCCAG00000021948	LARP1B	99	92.216	ENSFCAG00000014650	-	99	92.216	Felis_catus
ENSCCAG00000021948	LARP1B	99	67.974	ENSFALG00000008098	LARP1B	98	69.172	Ficedula_albicollis
ENSCCAG00000021948	LARP1B	98	55.945	ENSFHEG00000010264	larp1b	80	56.111	Fundulus_heteroclitus
ENSCCAG00000021948	LARP1B	83	65.986	ENSGMOG00000005207	larp1b	62	67.687	Gadus_morhua
ENSCCAG00000021948	LARP1B	98	69.909	ENSGALG00000010207	LARP1B	84	70.203	Gallus_gallus
ENSCCAG00000021948	LARP1B	91	58.053	ENSGAFG00000012012	larp1b	94	58.053	Gambusia_affinis
ENSCCAG00000021948	LARP1B	98	52.406	ENSGACG00000004609	larp1b	83	54.759	Gasterosteus_aculeatus
ENSCCAG00000021948	LARP1B	99	76.471	ENSGAGG00000017209	LARP1B	85	76.688	Gopherus_agassizii
ENSCCAG00000021948	LARP1B	100	96.718	ENSGGOG00000015900	LARP1B	100	96.718	Gorilla_gorilla
ENSCCAG00000021948	LARP1B	97	56.318	ENSHBUG00000009730	larp1b	83	55.355	Haplochromis_burtoni
ENSCCAG00000021948	LARP1B	97	75.460	ENSHGLG00000013922	-	96	74.312	Heterocephalus_glaber_female
ENSCCAG00000021948	LARP1B	99	86.686	ENSHGLG00000006728	-	99	86.982	Heterocephalus_glaber_female
ENSCCAG00000021948	LARP1B	97	75.460	ENSHGLG00100016491	-	96	74.312	Heterocephalus_glaber_male
ENSCCAG00000021948	LARP1B	99	87.425	ENSHGLG00100014041	-	100	84.046	Heterocephalus_glaber_male
ENSCCAG00000021948	LARP1B	76	59.379	ENSHCOG00000000918	larp1b	97	59.749	Hippocampus_comes
ENSCCAG00000021948	LARP1B	86	59.345	ENSIPUG00000012138	larp1b	80	54.963	Ictalurus_punctatus
ENSCCAG00000021948	LARP1B	91	67.541	ENSSTOG00000033183	-	96	67.003	Ictidomys_tridecemlineatus
ENSCCAG00000021948	LARP1B	99	80.060	ENSSTOG00000021917	-	94	80.967	Ictidomys_tridecemlineatus
ENSCCAG00000021948	LARP1B	99	90.149	ENSSTOG00000008596	-	99	90.149	Ictidomys_tridecemlineatus
ENSCCAG00000021948	LARP1B	96	74.455	ENSSTOG00000034510	-	91	71.940	Ictidomys_tridecemlineatus
ENSCCAG00000021948	LARP1B	99	87.349	ENSJJAG00000022360	Larp1b	99	87.349	Jaculus_jaculus
ENSCCAG00000021948	LARP1B	95	54.725	ENSKMAG00000011589	larp1b	85	55.016	Kryptolebias_marmoratus
ENSCCAG00000021948	LARP1B	97	56.344	ENSLBEG00000005655	larp1b	84	55.755	Labrus_bergylta
ENSCCAG00000021948	LARP1B	99	71.868	ENSLACG00000015247	LARP1B	100	69.720	Latimeria_chalumnae
ENSCCAG00000021948	LARP1B	99	63.933	ENSLOCG00000010684	larp1b	93	65.368	Lepisosteus_oculatus
ENSCCAG00000021948	LARP1B	100	93.175	ENSLAFG00000008473	-	100	93.175	Loxodonta_africana
ENSCCAG00000021948	LARP1B	70	92.361	ENSMFAG00000003306	-	93	92.361	Macaca_fascicularis
ENSCCAG00000021948	LARP1B	100	97.490	ENSMFAG00000002218	LARP1B	100	97.490	Macaca_fascicularis
ENSCCAG00000021948	LARP1B	100	97.297	ENSMMUG00000021347	LARP1B	100	97.297	Macaca_mulatta
ENSCCAG00000021948	LARP1B	91	96.667	ENSMNEG00000030406	LARP1B	100	96.667	Macaca_nemestrina
ENSCCAG00000021948	LARP1B	64	92.958	ENSMNEG00000027747	-	91	93.382	Macaca_nemestrina
ENSCCAG00000021948	LARP1B	100	91.685	ENSMLEG00000009306	LARP1B	100	91.904	Mandrillus_leucophaeus
ENSCCAG00000021948	LARP1B	98	57.356	ENSMAMG00000000081	larp1b	85	57.463	Mastacembelus_armatus
ENSCCAG00000021948	LARP1B	76	62.267	ENSMZEG00005002545	larp1b	96	59.769	Maylandia_zebra
ENSCCAG00000021948	LARP1B	94	62.901	ENSMGAG00000004809	LARP1B	98	62.775	Meleagris_gallopavo
ENSCCAG00000021948	LARP1B	99	90.120	ENSMAUG00000007879	-	99	90.120	Mesocricetus_auratus
ENSCCAG00000021948	LARP1B	99	94.611	ENSMICG00000036111	LARP1B	99	94.611	Microcebus_murinus
ENSCCAG00000021948	LARP1B	98	77.644	ENSMICG00000037883	-	97	74.860	Microcebus_murinus
ENSCCAG00000021948	LARP1B	98	70.392	ENSMICG00000028052	-	99	70.751	Microcebus_murinus
ENSCCAG00000021948	LARP1B	78	92.748	ENSMOCG00000001490	Larp1b	95	92.748	Microtus_ochrogaster
ENSCCAG00000021948	LARP1B	98	87.273	ENSMODG00000012300	LARP1B	81	85.496	Monodelphis_domestica
ENSCCAG00000021948	LARP1B	99	56.157	ENSMALG00000003638	larp1b	84	56.649	Monopterus_albus
ENSCCAG00000021948	LARP1B	99	88.922	MGP_CAROLIEiJ_G0024962	Larp1b	99	88.922	Mus_caroli
ENSCCAG00000021948	LARP1B	99	90.120	ENSMUSG00000025762	Larp1b	99	90.120	Mus_musculus
ENSCCAG00000021948	LARP1B	99	89.820	MGP_PahariEiJ_G0026403	Larp1b	99	89.820	Mus_pahari
ENSCCAG00000021948	LARP1B	99	90.120	MGP_SPRETEiJ_G0025897	Larp1b	99	90.120	Mus_spretus
ENSCCAG00000021948	LARP1B	98	93.617	ENSMPUG00000017365	LARP1B	81	89.180	Mustela_putorius_furo
ENSCCAG00000021948	LARP1B	96	82.217	ENSMLUG00000010229	LARP1B	97	82.217	Myotis_lucifugus
ENSCCAG00000021948	LARP1B	76	56.528	ENSNBRG00000023846	larp1b	78	54.707	Neolamprologus_brichardi
ENSCCAG00000021948	LARP1B	100	96.525	ENSNLEG00000013819	LARP1B	100	96.525	Nomascus_leucogenys
ENSCCAG00000021948	LARP1B	87	83.654	ENSMEUG00000010308	LARP1B	88	83.654	Notamacropus_eugenii
ENSCCAG00000021948	LARP1B	98	74.468	ENSOPRG00000005478	LARP1B	99	71.868	Ochotona_princeps
ENSCCAG00000021948	LARP1B	99	88.024	ENSODEG00000001292	-	99	88.024	Octodon_degus
ENSCCAG00000021948	LARP1B	97	56.344	ENSONIG00000012386	larp1b	93	56.203	Oreochromis_niloticus
ENSCCAG00000021948	LARP1B	98	92.705	ENSOCUG00000013330	LARP1B	98	86.995	Oryctolagus_cuniculus
ENSCCAG00000021948	LARP1B	99	55.305	ENSORLG00000017954	larp1b	83	55.424	Oryzias_latipes
ENSCCAG00000021948	LARP1B	99	54.973	ENSORLG00020013081	larp1b	83	55.424	Oryzias_latipes_hni
ENSCCAG00000021948	LARP1B	99	55.639	ENSORLG00015009580	larp1b	83	55.639	Oryzias_latipes_hsok
ENSCCAG00000021948	LARP1B	98	55.832	ENSOMEG00000004210	larp1b	82	55.940	Oryzias_melastigma
ENSCCAG00000021948	LARP1B	98	90.303	ENSOGAG00000005771	LARP1B	97	88.902	Otolemur_garnettii
ENSCCAG00000021948	LARP1B	98	90.909	ENSOARG00000015300	LARP1B	99	88.743	Ovis_aries
ENSCCAG00000021948	LARP1B	100	96.332	ENSPPAG00000030439	LARP1B	100	96.332	Pan_paniscus
ENSCCAG00000021948	LARP1B	99	92.216	ENSPPRG00000002743	-	99	92.216	Panthera_pardus
ENSCCAG00000021948	LARP1B	99	92.216	ENSPTIG00000011225	LARP1B	99	92.216	Panthera_tigris_altaica
ENSCCAG00000021948	LARP1B	100	96.332	ENSPTRG00000016437	LARP1B	100	96.332	Pan_troglodytes
ENSCCAG00000021948	LARP1B	100	97.104	ENSPANG00000012488	LARP1B	100	97.104	Papio_anubis
ENSCCAG00000021948	LARP1B	89	54.248	ENSPKIG00000014360	larp1b	88	54.241	Paramormyrops_kingsleyae
ENSCCAG00000021948	LARP1B	96	77.904	ENSPSIG00000012885	LARP1B	92	77.335	Pelodiscus_sinensis
ENSCCAG00000021948	LARP1B	79	60.194	ENSPMGG00000007207	larp1b	84	60.194	Periophthalmus_magnuspinnatus
ENSCCAG00000021948	LARP1B	94	51.659	ENSPMAG00000002700	larp1b	97	52.013	Petromyzon_marinus
ENSCCAG00000021948	LARP1B	99	84.478	ENSPCIG00000026516	LARP1B	98	83.979	Phascolarctos_cinereus
ENSCCAG00000021948	LARP1B	97	56.067	ENSPFOG00000019519	larp1b	82	55.649	Poecilia_formosa
ENSCCAG00000021948	LARP1B	98	51.009	ENSPFOG00000022837	-	78	50.826	Poecilia_formosa
ENSCCAG00000021948	LARP1B	97	57.112	ENSPLAG00000007115	larp1b	82	56.789	Poecilia_latipinna
ENSCCAG00000021948	LARP1B	97	56.789	ENSPMEG00000001224	larp1b	82	56.573	Poecilia_mexicana
ENSCCAG00000021948	LARP1B	84	53.420	ENSPREG00000005955	-	95	52.288	Poecilia_reticulata
ENSCCAG00000021948	LARP1B	98	88.146	ENSPCAG00000007546	LARP1B	99	84.995	Procavia_capensis
ENSCCAG00000021948	LARP1B	99	93.713	ENSPCOG00000021874	LARP1B	99	93.713	Propithecus_coquereli
ENSCCAG00000021948	LARP1B	100	83.151	ENSPVAG00000005373	LARP1B	99	83.151	Pteropus_vampyrus
ENSCCAG00000021948	LARP1B	76	62.034	ENSPNYG00000017357	larp1b	96	59.435	Pundamilia_nyererei
ENSCCAG00000021948	LARP1B	95	54.536	ENSPNAG00000008823	larp1b	84	55.591	Pygocentrus_nattereri
ENSCCAG00000021948	LARP1B	99	91.617	ENSRNOG00000038366	Larp1b	99	91.617	Rattus_norvegicus
ENSCCAG00000021948	LARP1B	99	87.425	ENSRBIG00000038568	-	97	82.535	Rhinopithecus_bieti
ENSCCAG00000021948	LARP1B	100	95.560	ENSRBIG00000039982	-	100	95.560	Rhinopithecus_bieti
ENSCCAG00000021948	LARP1B	100	97.490	ENSRROG00000030771	LARP1B	100	97.490	Rhinopithecus_roxellana
ENSCCAG00000021948	LARP1B	99	77.545	ENSRROG00000038525	-	96	77.545	Rhinopithecus_roxellana
ENSCCAG00000021948	LARP1B	98	87.576	ENSSHAG00000014474	LARP1B	100	84.478	Sarcophilus_harrisii
ENSCCAG00000021948	LARP1B	97	55.832	ENSSMAG00000006347	larp1b	91	55.485	Scophthalmus_maximus
ENSCCAG00000021948	LARP1B	97	57.190	ENSSDUG00000004182	larp1b	82	57.112	Seriola_dumerili
ENSCCAG00000021948	LARP1B	78	60.194	ENSSLDG00000014613	larp1b	71	60.055	Seriola_lalandi_dorsalis
ENSCCAG00000021948	LARP1B	98	74.364	ENSSPUG00000011837	LARP1B	97	68.265	Sphenodon_punctatus
ENSCCAG00000021948	LARP1B	97	56.405	ENSSPAG00000017772	larp1b	85	55.335	Stegastes_partitus
ENSCCAG00000021948	LARP1B	98	92.401	ENSSSCG00000034280	LARP1B	99	96.703	Sus_scrofa
ENSCCAG00000021948	LARP1B	73	56.379	ENSSSCG00000040491	-	100	75.862	Sus_scrofa
ENSCCAG00000021948	LARP1B	88	69.843	ENSTGUG00000002098	-	96	66.934	Taeniopygia_guttata
ENSCCAG00000021948	LARP1B	99	53.780	ENSTRUG00000005612	larp1b	83	54.329	Takifugu_rubripes
ENSCCAG00000021948	LARP1B	97	53.079	ENSTNIG00000012398	larp1b	94	53.814	Tetraodon_nigroviridis
ENSCCAG00000021948	LARP1B	87	91.346	ENSTBEG00000004177	LARP1B	88	86.538	Tupaia_belangeri
ENSCCAG00000021948	LARP1B	100	79.367	ENSTTRG00000012984	LARP1B	99	79.367	Tursiops_truncatus
ENSCCAG00000021948	LARP1B	99	82.635	ENSUAMG00000016938	-	90	95.833	Ursus_americanus
ENSCCAG00000021948	LARP1B	98	93.009	ENSUMAG00000007373	LARP1B	98	89.945	Ursus_maritimus
ENSCCAG00000021948	LARP1B	98	80.157	ENSVPAG00000007223	LARP1B	99	78.060	Vicugna_pacos
ENSCCAG00000021948	LARP1B	98	93.313	ENSVVUG00000011307	LARP1B	100	90.980	Vulpes_vulpes
ENSCCAG00000021948	LARP1B	98	60.706	ENSXETG00000022512	larp1b	86	60.486	Xenopus_tropicalis
ENSCCAG00000021948	LARP1B	73	59.145	ENSXCOG00000004435	larp1b	71	57.857	Xiphophorus_couchianus
ENSCCAG00000021948	LARP1B	97	56.498	ENSXMAG00000008150	larp1b	82	56.391	Xiphophorus_maculatus