EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000022209 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC108299781
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 15988 bases
Position: chrKV389450.1:11505682-11521669
Accession: 108299781
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000008936	zf-U1	PF06220.12	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000026318	-	453	-	ENSCCAP00000008936	150 (aa)	-	A0A2K5PZ98
ENSCCAT00000026297	-	714	XM_017522276	ENSCCAP00000008915	105 (aa)	XP_017377765	A0A2K5PZ50

Gene Model

Click here to download ENSCCAG00000022209's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000022209's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000022209	-	95	51.282	ENSCCAG00000028293	-	61	54.430
ENSCCAG00000022209	-	95	75.000	ENSCCAG00000036059	-	89	73.125
ENSCCAG00000022209	-	100	71.341	ENSCCAG00000022751	-	100	71.341

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000022209	-	95	80.128	ENSG00000124562	SNRPC	95	96.429	Homo_sapiens
ENSCCAG00000022209	-	100	72.376	ENSAMEG00000000963	SNRPC	100	72.376	Ailuropoda_melanoleuca
ENSCCAG00000022209	-	95	77.564	ENSACAG00000015721	SNRPC	87	77.564	Anolis_carolinensis
ENSCCAG00000022209	-	95	80.128	ENSANAG00000019696	-	98	80.128	Aotus_nancymaae
ENSCCAG00000022209	-	95	66.897	ENSANAG00000021444	-	59	71.951	Aotus_nancymaae
ENSCCAG00000022209	-	95	76.282	ENSANAG00000019157	-	98	76.282	Aotus_nancymaae
ENSCCAG00000022209	-	95	73.718	ENSANAG00000020588	-	91	73.718	Aotus_nancymaae
ENSCCAG00000022209	-	95	79.487	ENSANAG00000007843	-	98	79.487	Aotus_nancymaae
ENSCCAG00000022209	-	95	69.231	ENSANAG00000019726	-	90	69.872	Aotus_nancymaae
ENSCCAG00000022209	-	95	79.730	ENSANAG00000021026	-	95	75.641	Aotus_nancymaae
ENSCCAG00000022209	-	95	64.744	ENSAMXG00000032641	snrpc	88	63.354	Astyanax_mexicanus
ENSCCAG00000022209	-	95	80.128	ENSBTAG00000024549	SNRPC	98	80.128	Bos_taurus
ENSCCAG00000022209	-	95	80.128	ENSCJAG00000015321	-	98	80.128	Callithrix_jacchus
ENSCCAG00000022209	-	95	78.846	ENSCJAG00000043055	-	98	78.846	Callithrix_jacchus
ENSCCAG00000022209	-	95	78.205	ENSCJAG00000041822	-	98	78.205	Callithrix_jacchus
ENSCCAG00000022209	-	95	75.641	ENSCAFG00000031775	-	98	75.641	Canis_familiaris
ENSCCAG00000022209	-	95	60.256	ENSCAFG00000025525	-	98	60.897	Canis_familiaris
ENSCCAG00000022209	-	53	66.667	ENSCAFG00000001231	-	73	66.667	Canis_familiaris
ENSCCAG00000022209	-	95	68.790	ENSCAFG00000028988	-	98	75.796	Canis_familiaris
ENSCCAG00000022209	-	95	60.571	ENSCAFG00020026577	-	98	66.857	Canis_lupus_dingo
ENSCCAG00000022209	-	95	80.128	ENSCAFG00020005945	-	98	80.128	Canis_lupus_dingo
ENSCCAG00000022209	-	95	75.641	ENSCAFG00020017383	-	98	75.641	Canis_lupus_dingo
ENSCCAG00000022209	-	92	71.711	ENSCAFG00020009944	-	87	71.711	Canis_lupus_dingo
ENSCCAG00000022209	-	95	78.205	ENSCAFG00020005758	-	98	78.205	Canis_lupus_dingo
ENSCCAG00000022209	-	95	80.769	ENSCHIG00000012087	-	98	80.769	Capra_hircus
ENSCCAG00000022209	-	95	73.611	ENSTSYG00000025721	-	98	70.139	Carlito_syrichta
ENSCCAG00000022209	-	95	80.128	ENSTSYG00000011216	-	98	80.128	Carlito_syrichta
ENSCCAG00000022209	-	92	78.723	ENSCAPG00000005161	SNRPC	96	78.723	Cavia_aperea
ENSCCAG00000022209	-	95	80.128	ENSCPOG00000008563	SNRPC	98	80.128	Cavia_porcellus
ENSCCAG00000022209	-	95	80.128	ENSCATG00000035787	SNRPC	98	80.128	Cercocebus_atys
ENSCCAG00000022209	-	95	80.128	ENSCLAG00000016920	SNRPC	98	80.128	Chinchilla_lanigera
ENSCCAG00000022209	-	94	62.745	ENSCLAG00000010242	-	73	59.322	Chinchilla_lanigera
ENSCCAG00000022209	-	95	61.143	ENSCSAG00000009821	SNRPC	98	67.429	Chlorocebus_sabaeus
ENSCCAG00000022209	-	97	61.635	ENSCHOG00000011439	SNRPC	89	61.635	Choloepus_hoffmanni
ENSCCAG00000022209	-	95	77.564	ENSCPBG00000027142	SNRPC	98	77.564	Chrysemys_picta_bellii
ENSCCAG00000022209	-	95	80.128	ENSCANG00000028035	SNRPC	98	80.128	Colobus_angolensis_palliatus
ENSCCAG00000022209	-	95	79.487	ENSCGRG00001009011	-	98	79.487	Cricetulus_griseus_chok1gshd
ENSCCAG00000022209	-	95	78.873	ENSCGRG00001021483	-	98	78.873	Cricetulus_griseus_chok1gshd
ENSCCAG00000022209	-	95	79.487	ENSCGRG00000005005	Snrpc	98	79.487	Cricetulus_griseus_crigri
ENSCCAG00000022209	-	95	64.744	ENSDARG00000009871	snrpc	98	64.744	Danio_rerio
ENSCCAG00000022209	-	53	66.667	ENSDNOG00000042403	-	74	66.667	Dasypus_novemcinctus
ENSCCAG00000022209	-	95	80.128	ENSDNOG00000034699	-	98	80.128	Dasypus_novemcinctus
ENSCCAG00000022209	-	89	62.838	ENSDORG00000029823	-	84	57.364	Dipodomys_ordii
ENSCCAG00000022209	-	99	57.542	ENSDORG00000005955	Snrpc	65	60.897	Dipodomys_ordii
ENSCCAG00000022209	-	93	76.471	ENSETEG00000008268	-	98	76.471	Echinops_telfairi
ENSCCAG00000022209	-	93	73.856	ENSETEG00000011265	-	98	74.510	Echinops_telfairi
ENSCCAG00000022209	-	95	80.128	ENSEASG00005021007	SNRPC	98	80.128	Equus_asinus_asinus
ENSCCAG00000022209	-	95	80.128	ENSECAG00000026848	SNRPC	98	80.128	Equus_caballus
ENSCCAG00000022209	-	95	60.897	ENSEEUG00000014633	SNRPC	89	60.897	Erinaceus_europaeus
ENSCCAG00000022209	-	98	57.143	ENSELUG00000000815	SNRPC	96	57.143	Esox_lucius
ENSCCAG00000022209	-	95	80.128	ENSFCAG00000044077	-	98	80.128	Felis_catus
ENSCCAG00000022209	-	95	73.718	ENSFCAG00000031775	-	86	73.077	Felis_catus
ENSCCAG00000022209	-	95	78.846	ENSFALG00000003756	SNRPC	98	78.846	Ficedula_albicollis
ENSCCAG00000022209	-	95	80.128	ENSFDAG00000018111	SNRPC	98	80.128	Fukomys_damarensis
ENSCCAG00000022209	-	95	78.344	ENSGALG00000002773	SNRPC	98	78.344	Gallus_gallus
ENSCCAG00000022209	-	95	77.564	ENSGAGG00000003063	SNRPC	98	77.564	Gopherus_agassizii
ENSCCAG00000022209	-	95	80.128	ENSGGOG00000012499	SNRPC	98	80.128	Gorilla_gorilla
ENSCCAG00000022209	-	75	52.381	ENSHGLG00000005871	-	100	56.604	Heterocephalus_glaber_female
ENSCCAG00000022209	-	95	80.128	ENSHGLG00000013981	SNRPC	99	80.128	Heterocephalus_glaber_female
ENSCCAG00000022209	-	95	63.871	ENSHGLG00000017741	-	98	61.290	Heterocephalus_glaber_female
ENSCCAG00000022209	-	95	80.128	ENSHGLG00100009478	SNRPC	99	80.128	Heterocephalus_glaber_male
ENSCCAG00000022209	-	95	75.000	ENSHGLG00100017764	-	98	75.000	Heterocephalus_glaber_male
ENSCCAG00000022209	-	95	63.871	ENSHGLG00100010786	-	98	61.290	Heterocephalus_glaber_male
ENSCCAG00000022209	-	95	65.385	ENSIPUG00000024851	snrpc	98	65.385	Ictalurus_punctatus
ENSCCAG00000022209	-	95	80.128	ENSSTOG00000013786	SNRPC	98	80.128	Ictidomys_tridecemlineatus
ENSCCAG00000022209	-	95	79.487	ENSJJAG00000021741	Snrpc	98	79.487	Jaculus_jaculus
ENSCCAG00000022209	-	95	80.128	ENSLAFG00000013534	SNRPC	98	80.128	Loxodonta_africana
ENSCCAG00000022209	-	95	79.487	ENSMFAG00000030525	-	98	79.487	Macaca_fascicularis
ENSCCAG00000022209	-	95	80.128	ENSMFAG00000031764	-	98	80.128	Macaca_fascicularis
ENSCCAG00000022209	-	100	79.878	ENSMMUG00000000869	-	100	79.878	Macaca_mulatta
ENSCCAG00000022209	-	95	80.128	ENSMMUG00000039415	-	98	80.128	Macaca_mulatta
ENSCCAG00000022209	-	94	72.258	ENSMMUG00000045425	-	97	72.258	Macaca_mulatta
ENSCCAG00000022209	-	95	80.128	ENSMNEG00000032731	SNRPC	98	80.128	Macaca_nemestrina
ENSCCAG00000022209	-	95	80.128	ENSMLEG00000033916	-	98	80.128	Mandrillus_leucophaeus
ENSCCAG00000022209	-	94	70.968	ENSMLEG00000040224	-	89	70.968	Mandrillus_leucophaeus
ENSCCAG00000022209	-	97	74.214	ENSMGAG00000006054	SNRPC	98	76.923	Meleagris_gallopavo
ENSCCAG00000022209	-	98	65.839	ENSMICG00000036552	-	89	62.733	Microcebus_murinus
ENSCCAG00000022209	-	95	79.487	ENSMICG00000032183	-	98	79.487	Microcebus_murinus
ENSCCAG00000022209	-	95	75.641	ENSMICG00000007339	-	98	73.077	Microcebus_murinus
ENSCCAG00000022209	-	95	67.949	ENSMICG00000009130	-	98	68.590	Microcebus_murinus
ENSCCAG00000022209	-	95	79.487	ENSMOCG00000017609	Snrpc	98	79.487	Microtus_ochrogaster
ENSCCAG00000022209	-	95	53.846	ENSMODG00000025263	-	98	48.077	Monodelphis_domestica
ENSCCAG00000022209	-	95	78.846	ENSMODG00000013904	-	98	78.846	Monodelphis_domestica
ENSCCAG00000022209	-	95	79.487	MGP_CAROLIEiJ_G0021308	Snrpc	98	79.487	Mus_caroli
ENSCCAG00000022209	-	95	79.487	ENSMUSG00000024217	Snrpc	98	79.487	Mus_musculus
ENSCCAG00000022209	-	53	65.591	MGP_SPRETEiJ_G0022221	-	78	65.591	Mus_spretus
ENSCCAG00000022209	-	95	80.128	ENSMPUG00000003210	SNRPC	98	80.128	Mustela_putorius_furo
ENSCCAG00000022209	-	95	80.128	ENSMLUG00000002488	SNRPC	98	80.128	Myotis_lucifugus
ENSCCAG00000022209	-	95	79.487	ENSNGAG00000019686	Snrpc	98	79.487	Nannospalax_galili
ENSCCAG00000022209	-	95	80.128	ENSNLEG00000034810	SNRPC	98	80.128	Nomascus_leucogenys
ENSCCAG00000022209	-	95	79.487	ENSODEG00000020201	-	98	79.487	Octodon_degus
ENSCCAG00000022209	-	95	80.128	ENSODEG00000019633	-	98	80.128	Octodon_degus
ENSCCAG00000022209	-	77	72.093	ENSODEG00000006008	-	93	72.093	Octodon_degus
ENSCCAG00000022209	-	95	80.128	ENSODEG00000018985	-	98	80.128	Octodon_degus
ENSCCAG00000022209	-	95	80.128	ENSODEG00000020370	-	98	80.128	Octodon_degus
ENSCCAG00000022209	-	95	80.128	ENSODEG00000017080	-	98	80.128	Octodon_degus
ENSCCAG00000022209	-	97	74.324	ENSOANG00000003405	SNRPC	100	74.324	Ornithorhynchus_anatinus
ENSCCAG00000022209	-	95	80.128	ENSOCUG00000026668	-	98	80.128	Oryctolagus_cuniculus
ENSCCAG00000022209	-	95	78.846	ENSOCUG00000023292	-	98	78.846	Oryctolagus_cuniculus
ENSCCAG00000022209	-	95	78.846	ENSOCUG00000026430	-	97	78.846	Oryctolagus_cuniculus
ENSCCAG00000022209	-	95	78.205	ENSOGAG00000026269	-	98	78.205	Otolemur_garnettii
ENSCCAG00000022209	-	94	80.000	ENSOGAG00000008755	-	88	80.128	Otolemur_garnettii
ENSCCAG00000022209	-	95	80.128	ENSOARG00000010823	SNRPC	98	80.128	Ovis_aries
ENSCCAG00000022209	-	95	80.128	ENSPPAG00000043871	SNRPC	98	80.128	Pan_paniscus
ENSCCAG00000022209	-	95	80.128	ENSPPRG00000008647	-	98	80.128	Panthera_pardus
ENSCCAG00000022209	-	95	80.128	ENSPTIG00000021867	-	98	80.128	Panthera_tigris_altaica
ENSCCAG00000022209	-	95	80.128	ENSPTRG00000018070	SNRPC	98	80.128	Pan_troglodytes
ENSCCAG00000022209	-	94	70.323	ENSPANG00000018228	-	91	70.968	Papio_anubis
ENSCCAG00000022209	-	95	80.128	ENSPANG00000022802	-	98	80.128	Papio_anubis
ENSCCAG00000022209	-	95	76.923	ENSPSIG00000004876	SNRPC	76	76.923	Pelodiscus_sinensis
ENSCCAG00000022209	-	95	79.487	ENSPEMG00000010773	Snrpc	98	79.487	Peromyscus_maniculatus_bairdii
ENSCCAG00000022209	-	95	67.308	ENSPEMG00000002763	-	98	64.103	Peromyscus_maniculatus_bairdii
ENSCCAG00000022209	-	95	80.128	ENSPCAG00000016885	SNRPC	89	80.128	Procavia_capensis
ENSCCAG00000022209	-	95	80.128	ENSPCOG00000004904	SNRPC	98	80.128	Propithecus_coquereli
ENSCCAG00000022209	-	100	72.376	ENSPVAG00000015597	SNRPC	100	72.376	Pteropus_vampyrus
ENSCCAG00000022209	-	95	59.615	ENSPNAG00000012799	snrpc	98	62.179	Pygocentrus_nattereri
ENSCCAG00000022209	-	95	79.487	ENSRNOG00000000493	Snrpc	98	79.487	Rattus_norvegicus
ENSCCAG00000022209	-	94	70.968	ENSRBIG00000036353	-	85	67.683	Rhinopithecus_bieti
ENSCCAG00000022209	-	95	79.487	ENSRBIG00000014819	-	98	79.487	Rhinopithecus_bieti
ENSCCAG00000022209	-	95	79.487	ENSRBIG00000022998	-	98	79.487	Rhinopithecus_bieti
ENSCCAG00000022209	-	95	80.128	ENSRBIG00000037567	-	98	80.128	Rhinopithecus_bieti
ENSCCAG00000022209	-	95	80.128	ENSRROG00000041300	SNRPC	98	80.128	Rhinopithecus_roxellana
ENSCCAG00000022209	-	95	68.919	ENSSBOG00000032361	-	66	61.364	Saimiri_boliviensis_boliviensis
ENSCCAG00000022209	-	95	62.179	ENSSBOG00000032882	-	93	62.179	Saimiri_boliviensis_boliviensis
ENSCCAG00000022209	-	93	64.706	ENSSBOG00000023189	-	89	64.706	Saimiri_boliviensis_boliviensis
ENSCCAG00000022209	-	95	80.128	ENSSBOG00000031528	-	98	80.128	Saimiri_boliviensis_boliviensis
ENSCCAG00000022209	-	95	53.846	ENSSHAG00000002972	-	98	48.077	Sarcophilus_harrisii
ENSCCAG00000022209	-	95	79.487	ENSSHAG00000000945	-	87	79.487	Sarcophilus_harrisii
ENSCCAG00000022209	-	59	55.882	ENSSFOG00015022422	snrpc	77	61.667	Scleropages_formosus
ENSCCAG00000022209	-	95	60.897	ENSSFOG00015019150	snrpc	98	60.897	Scleropages_formosus
ENSCCAG00000022209	-	95	57.051	ENSSARG00000008970	SNRPC	92	54.878	Sorex_araneus
ENSCCAG00000022209	-	95	78.205	ENSSPUG00000002502	SNRPC	98	78.205	Sphenodon_punctatus
ENSCCAG00000022209	-	95	80.128	ENSSSCG00000001531	SNRPC	98	80.128	Sus_scrofa
ENSCCAG00000022209	-	95	78.846	ENSTGUG00000001773	SNRPC	98	78.846	Taeniopygia_guttata
ENSCCAG00000022209	-	95	50.000	ENSTRUG00000021651	snrpc	98	46.875	Takifugu_rubripes
ENSCCAG00000022209	-	93	53.595	ENSTBEG00000015356	-	66	60.215	Tupaia_belangeri
ENSCCAG00000022209	-	93	71.895	ENSTBEG00000013022	-	98	72.549	Tupaia_belangeri
ENSCCAG00000022209	-	100	71.978	ENSTTRG00000007827	SNRPC	100	71.978	Tursiops_truncatus
ENSCCAG00000022209	-	53	66.667	ENSUAMG00000014125	SNRPC	63	66.667	Ursus_americanus
ENSCCAG00000022209	-	95	60.571	ENSUMAG00000010869	SNRPC	98	67.429	Ursus_maritimus
ENSCCAG00000022209	-	95	80.128	ENSVVUG00000021947	-	98	80.128	Vulpes_vulpes
ENSCCAG00000022209	-	93	75.325	ENSVVUG00000010467	-	87	75.641	Vulpes_vulpes
ENSCCAG00000022209	-	95	69.872	ENSXETG00000024721	snrpc	98	69.872	Xenopus_tropicalis