EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000022263 (Gene tree)
Gene ID: 108281961
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 13872 bases
Position: chrKV389660.1:1415603-1429474
Accession: 108281961
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000009201	zf-CCCH	PF00642.24	1.7e-07	1	1
ENSCCAP00000009148	zf-CCCH	PF00642.24	1.8e-07	1	1
ENSCCAP00000009186	zf-CCCH	PF00642.24	1.8e-07	1	1
ENSCCAP00000009148	TRM	PF02005.16	6.7e-147	1	1
ENSCCAP00000009186	TRM	PF02005.16	7.2e-147	1	1
ENSCCAP00000009201	TRM	PF02005.16	2.8e-138	1	1
ENSCCAP00000009201	Met_10	PF02475.16	8.9e-06	1	1
ENSCCAP00000009148	Met_10	PF02475.16	9.1e-06	1	1
ENSCCAP00000009186	Met_10	PF02475.16	9.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000026568	TRMT1-202	1911	-	ENSCCAP00000009186	636 (aa)	-	A0A2K5PZY5
ENSCCAT00000026583	TRMT1-203	1839	-	ENSCCAP00000009201	613 (aa)	-	A0A2K5PZZ8
ENSCCAT00000026530	TRMT1-201	2131	XM_017497678	ENSCCAP00000009148	621 (aa)	XP_017353167	A0A2K5PZR7

Gene Model

Click here to download ENSCCAG00000022263's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000022263's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000022263	TRMT1	98	91.311	ENSG00000104907	TRMT1	100	92.147	Homo_sapiens
ENSCCAG00000022263	TRMT1	99	84.441	ENSAMEG00000012598	TRMT1	97	81.135	Ailuropoda_melanoleuca
ENSCCAG00000022263	TRMT1	92	57.243	ENSACIG00000018680	trmt1	91	56.134	Amphilophus_citrinellus
ENSCCAG00000022263	TRMT1	92	63.923	ENSAOCG00000006781	trmt1	85	63.923	Amphiprion_ocellaris
ENSCCAG00000022263	TRMT1	92	63.923	ENSAPEG00000007712	trmt1	85	63.923	Amphiprion_percula
ENSCCAG00000022263	TRMT1	92	65.620	ENSATEG00000001872	trmt1	84	65.620	Anabas_testudineus
ENSCCAG00000022263	TRMT1	93	66.265	ENSACAG00000003825	TRMT1	95	65.599	Anolis_carolinensis
ENSCCAG00000022263	TRMT1	100	95.987	ENSANAG00000023016	TRMT1	100	95.987	Aotus_nancymaae
ENSCCAG00000022263	TRMT1	92	62.347	ENSACLG00000010073	trmt1	92	62.347	Astatotilapia_calliptera
ENSCCAG00000022263	TRMT1	92	65.398	ENSAMXG00000012026	trmt1	85	65.398	Astyanax_mexicanus
ENSCCAG00000022263	TRMT1	98	84.967	ENSBTAG00000019325	TRMT1	89	83.307	Bos_taurus
ENSCCAG00000022263	TRMT1	85	40.074	WBGene00006613	trm-1	96	40.074	Caenorhabditis_elegans
ENSCCAG00000022263	TRMT1	99	93.408	ENSCJAG00000004566	TRMT1	99	91.935	Callithrix_jacchus
ENSCCAG00000022263	TRMT1	99	86.224	ENSCAFG00000017070	TRMT1	97	86.224	Canis_familiaris
ENSCCAG00000022263	TRMT1	99	85.505	ENSCAFG00020005397	TRMT1	97	84.416	Canis_lupus_dingo
ENSCCAG00000022263	TRMT1	98	84.502	ENSCHIG00000013569	TRMT1	98	80.858	Capra_hircus
ENSCCAG00000022263	TRMT1	98	80.914	ENSTSYG00000003207	TRMT1	99	78.287	Carlito_syrichta
ENSCCAG00000022263	TRMT1	91	76.720	ENSCAPG00000003355	TRMT1	99	77.196	Cavia_aperea
ENSCCAG00000022263	TRMT1	99	80.193	ENSCPOG00000011754	TRMT1	94	80.193	Cavia_porcellus
ENSCCAG00000022263	TRMT1	99	91.057	ENSCATG00000039850	TRMT1	98	86.943	Cercocebus_atys
ENSCCAG00000022263	TRMT1	87	74.630	ENSCATG00000038220	-	99	74.174	Cercocebus_atys
ENSCCAG00000022263	TRMT1	98	83.607	ENSCLAG00000015295	TRMT1	97	78.467	Chinchilla_lanigera
ENSCCAG00000022263	TRMT1	79	91.870	ENSCSAG00000006500	TRMT1	98	89.423	Chlorocebus_sabaeus
ENSCCAG00000022263	TRMT1	95	66.553	ENSCPBG00000023866	TRMT1	94	64.455	Chrysemys_picta_bellii
ENSCCAG00000022263	TRMT1	88	45.471	ENSCING00000002884	-	96	45.471	Ciona_intestinalis
ENSCCAG00000022263	TRMT1	88	45.487	ENSCSAVG00000010927	-	100	45.539	Ciona_savignyi
ENSCCAG00000022263	TRMT1	99	74.230	ENSCANG00000040631	TRMT1	100	71.189	Colobus_angolensis_palliatus
ENSCCAG00000022263	TRMT1	98	70.016	ENSCANG00000031650	-	98	68.720	Colobus_angolensis_palliatus
ENSCCAG00000022263	TRMT1	98	83.333	ENSCGRG00001022594	Trmt1	95	81.157	Cricetulus_griseus_chok1gshd
ENSCCAG00000022263	TRMT1	98	83.333	ENSCGRG00000017732	Trmt1	95	81.157	Cricetulus_griseus_crigri
ENSCCAG00000022263	TRMT1	92	63.986	ENSCSEG00000001643	trmt1	87	64.607	Cynoglossus_semilaevis
ENSCCAG00000022263	TRMT1	92	65.035	ENSCVAG00000011886	trmt1	87	64.274	Cyprinodon_variegatus
ENSCCAG00000022263	TRMT1	92	64.310	ENSDARG00000010978	trmt1	85	64.655	Danio_rerio
ENSCCAG00000022263	TRMT1	87	59.300	ENSDNOG00000048240	-	92	59.300	Dasypus_novemcinctus
ENSCCAG00000022263	TRMT1	98	82.815	ENSDORG00000014298	Trmt1	99	78.506	Dipodomys_ordii
ENSCCAG00000022263	TRMT1	84	47.646	FBgn0032430	CG6388	89	47.646	Drosophila_melanogaster
ENSCCAG00000022263	TRMT1	50	82.745	ENSETEG00000015483	-	54	78.445	Echinops_telfairi
ENSCCAG00000022263	TRMT1	96	48.671	ENSEBUG00000003449	trmt1	86	48.671	Eptatretus_burgeri
ENSCCAG00000022263	TRMT1	98	83.961	ENSEASG00005004050	TRMT1	99	82.035	Equus_asinus_asinus
ENSCCAG00000022263	TRMT1	98	84.124	ENSECAG00000016149	TRMT1	99	82.035	Equus_caballus
ENSCCAG00000022263	TRMT1	64	67.254	ENSEEUG00000014102	-	100	67.254	Erinaceus_europaeus
ENSCCAG00000022263	TRMT1	92	62.847	ENSELUG00000021659	trmt1	85	62.847	Esox_lucius
ENSCCAG00000022263	TRMT1	99	84.441	ENSFCAG00000000483	TRMT1	98	82.630	Felis_catus
ENSCCAG00000022263	TRMT1	98	82.353	ENSFDAG00000007386	TRMT1	97	80.687	Fukomys_damarensis
ENSCCAG00000022263	TRMT1	84	67.235	ENSFHEG00000012865	trmt1	89	66.418	Fundulus_heteroclitus
ENSCCAG00000022263	TRMT1	92	59.337	ENSGMOG00000006564	trmt1	98	59.860	Gadus_morhua
ENSCCAG00000022263	TRMT1	92	64.799	ENSGAFG00000011862	trmt1	88	65.683	Gambusia_affinis
ENSCCAG00000022263	TRMT1	94	61.224	ENSGACG00000000227	trmt1	94	61.525	Gasterosteus_aculeatus
ENSCCAG00000022263	TRMT1	93	67.478	ENSGAGG00000016432	TRMT1	87	66.214	Gopherus_agassizii
ENSCCAG00000022263	TRMT1	98	91.639	ENSGGOG00000014007	TRMT1	99	87.558	Gorilla_gorilla
ENSCCAG00000022263	TRMT1	92	56.392	ENSHBUG00000008821	trmt1	94	56.392	Haplochromis_burtoni
ENSCCAG00000022263	TRMT1	99	82.903	ENSHGLG00000015972	TRMT1	94	82.903	Heterocephalus_glaber_female
ENSCCAG00000022263	TRMT1	99	76.651	ENSHGLG00100018112	TRMT1	98	75.851	Heterocephalus_glaber_male
ENSCCAG00000022263	TRMT1	92	61.257	ENSHCOG00000009447	trmt1	88	61.257	Hippocampus_comes
ENSCCAG00000022263	TRMT1	93	63.097	ENSIPUG00000002899	trmt1	87	63.471	Ictalurus_punctatus
ENSCCAG00000022263	TRMT1	99	85.251	ENSSTOG00000012531	TRMT1	97	83.604	Ictidomys_tridecemlineatus
ENSCCAG00000022263	TRMT1	95	82.910	ENSJJAG00000017154	Trmt1	99	78.671	Jaculus_jaculus
ENSCCAG00000022263	TRMT1	92	65.849	ENSKMAG00000011809	trmt1	95	65.324	Kryptolebias_marmoratus
ENSCCAG00000022263	TRMT1	92	64.273	ENSLBEG00000012703	trmt1	84	64.273	Labrus_bergylta
ENSCCAG00000022263	TRMT1	93	55.938	ENSLACG00000014585	TRMT1	99	54.309	Latimeria_chalumnae
ENSCCAG00000022263	TRMT1	92	61.821	ENSLOCG00000006479	trmt1	97	61.996	Lepisosteus_oculatus
ENSCCAG00000022263	TRMT1	99	84.065	ENSLAFG00000014072	TRMT1	97	83.599	Loxodonta_africana
ENSCCAG00000022263	TRMT1	99	91.220	ENSMFAG00000033143	TRMT1	98	87.097	Macaca_fascicularis
ENSCCAG00000022263	TRMT1	99	85.505	ENSMMUG00000001167	TRMT1	98	85.505	Macaca_mulatta
ENSCCAG00000022263	TRMT1	99	91.220	ENSMNEG00000037867	TRMT1	98	87.097	Macaca_nemestrina
ENSCCAG00000022263	TRMT1	99	90.894	ENSMLEG00000016142	TRMT1	98	88.762	Mandrillus_leucophaeus
ENSCCAG00000022263	TRMT1	92	64.685	ENSMAMG00000004357	trmt1	85	64.860	Mastacembelus_armatus
ENSCCAG00000022263	TRMT1	92	62.872	ENSMZEG00005014510	trmt1	85	62.872	Maylandia_zebra
ENSCCAG00000022263	TRMT1	98	82.026	ENSMAUG00000011134	Trmt1	98	78.473	Mesocricetus_auratus
ENSCCAG00000022263	TRMT1	99	87.338	ENSMICG00000000793	TRMT1	98	84.356	Microcebus_murinus
ENSCCAG00000022263	TRMT1	98	82.951	ENSMOCG00000015895	Trmt1	98	78.560	Microtus_ochrogaster
ENSCCAG00000022263	TRMT1	92	62.697	ENSMMOG00000011097	trmt1	92	62.697	Mola_mola
ENSCCAG00000022263	TRMT1	94	75.000	ENSMODG00000011619	TRMT1	95	75.000	Monodelphis_domestica
ENSCCAG00000022263	TRMT1	98	82.295	MGP_CAROLIEiJ_G0031304	Trmt1	99	80.769	Mus_caroli
ENSCCAG00000022263	TRMT1	98	81.967	ENSMUSG00000001909	Trmt1	100	77.812	Mus_musculus
ENSCCAG00000022263	TRMT1	98	81.967	MGP_SPRETEiJ_G0032422	Trmt1	99	80.000	Mus_spretus
ENSCCAG00000022263	TRMT1	99	85.413	ENSMPUG00000004210	TRMT1	93	82.028	Mustela_putorius_furo
ENSCCAG00000022263	TRMT1	99	85.065	ENSMLUG00000012809	TRMT1	98	80.916	Myotis_lucifugus
ENSCCAG00000022263	TRMT1	99	81.006	ENSNGAG00000022486	Trmt1	98	78.053	Nannospalax_galili
ENSCCAG00000022263	TRMT1	80	65.373	ENSNBRG00000024376	trmt1	85	65.373	Neolamprologus_brichardi
ENSCCAG00000022263	TRMT1	83	87.845	ENSNLEG00000013019	-	98	87.463	Nomascus_leucogenys
ENSCCAG00000022263	TRMT1	95	74.068	ENSMEUG00000013756	TRMT1	99	74.068	Notamacropus_eugenii
ENSCCAG00000022263	TRMT1	80	84.161	ENSOPRG00000009471	-	79	84.161	Ochotona_princeps
ENSCCAG00000022263	TRMT1	99	82.982	ENSODEG00000010323	TRMT1	95	82.720	Octodon_degus
ENSCCAG00000022263	TRMT1	95	64.055	ENSONIG00000000400	trmt1	96	62.914	Oreochromis_niloticus
ENSCCAG00000022263	TRMT1	79	86.179	ENSOCUG00000021934	TRMT1	98	83.654	Oryctolagus_cuniculus
ENSCCAG00000022263	TRMT1	92	60.381	ENSORLG00000020074	trmt1	90	60.381	Oryzias_latipes
ENSCCAG00000022263	TRMT1	92	63.398	ENSORLG00020007561	trmt1	92	62.267	Oryzias_latipes_hni
ENSCCAG00000022263	TRMT1	92	63.573	ENSORLG00015006547	trmt1	86	63.573	Oryzias_latipes_hsok
ENSCCAG00000022263	TRMT1	92	63.923	ENSOMEG00000019343	trmt1	86	63.923	Oryzias_melastigma
ENSCCAG00000022263	TRMT1	97	83.882	ENSOGAG00000025576	TRMT1	98	81.440	Otolemur_garnettii
ENSCCAG00000022263	TRMT1	98	69.579	ENSOARG00000009397	TRMT1	91	69.108	Ovis_aries
ENSCCAG00000022263	TRMT1	99	73.906	ENSPPRG00000012117	TRMT1	100	73.579	Panthera_pardus
ENSCCAG00000022263	TRMT1	81	83.686	ENSPTIG00000008833	TRMT1	97	83.891	Panthera_tigris_altaica
ENSCCAG00000022263	TRMT1	99	68.455	ENSPTRG00000050421	-	99	65.586	Pan_troglodytes
ENSCCAG00000022263	TRMT1	98	91.475	ENSPTRG00000010557	TRMT1	99	87.711	Pan_troglodytes
ENSCCAG00000022263	TRMT1	99	91.382	ENSPANG00000009247	TRMT1	97	89.251	Papio_anubis
ENSCCAG00000022263	TRMT1	88	74.370	ENSPANG00000034058	-	95	74.262	Papio_anubis
ENSCCAG00000022263	TRMT1	92	65.799	ENSPKIG00000005309	trmt1	84	65.799	Paramormyrops_kingsleyae
ENSCCAG00000022263	TRMT1	91	57.801	ENSPSIG00000008762	TRMT1	83	56.873	Pelodiscus_sinensis
ENSCCAG00000022263	TRMT1	92	63.351	ENSPMGG00000019764	trmt1	90	63.351	Periophthalmus_magnuspinnatus
ENSCCAG00000022263	TRMT1	98	83.882	ENSPEMG00000016247	Trmt1	98	79.878	Peromyscus_maniculatus_bairdii
ENSCCAG00000022263	TRMT1	92	58.392	ENSPMAG00000004329	trmt1	89	58.392	Petromyzon_marinus
ENSCCAG00000022263	TRMT1	97	73.045	ENSPCIG00000019273	TRMT1	96	71.360	Phascolarctos_cinereus
ENSCCAG00000022263	TRMT1	92	66.725	ENSPFOG00000008527	trmt1	88	66.725	Poecilia_formosa
ENSCCAG00000022263	TRMT1	92	66.375	ENSPLAG00000018788	trmt1	87	69.574	Poecilia_latipinna
ENSCCAG00000022263	TRMT1	92	66.375	ENSPMEG00000013120	trmt1	88	66.550	Poecilia_mexicana
ENSCCAG00000022263	TRMT1	92	65.149	ENSPREG00000000211	trmt1	87	63.912	Poecilia_reticulata
ENSCCAG00000022263	TRMT1	98	91.803	ENSPPYG00000009622	TRMT1	99	88.018	Pongo_abelii
ENSCCAG00000022263	TRMT1	99	76.499	ENSPCAG00000003698	TRMT1	99	74.729	Procavia_capensis
ENSCCAG00000022263	TRMT1	99	87.500	ENSPCOG00000008653	TRMT1	98	86.016	Propithecus_coquereli
ENSCCAG00000022263	TRMT1	99	85.552	ENSPVAG00000015076	TRMT1	99	82.209	Pteropus_vampyrus
ENSCCAG00000022263	TRMT1	92	61.821	ENSPNYG00000013960	trmt1	92	61.821	Pundamilia_nyererei
ENSCCAG00000022263	TRMT1	86	65.489	ENSPNAG00000024859	trmt1	88	65.489	Pygocentrus_nattereri
ENSCCAG00000022263	TRMT1	98	82.295	ENSRNOG00000002914	Trmt1	95	82.295	Rattus_norvegicus
ENSCCAG00000022263	TRMT1	98	70.395	ENSRBIG00000037505	-	99	68.927	Rhinopithecus_bieti
ENSCCAG00000022263	TRMT1	99	90.569	ENSRBIG00000038324	TRMT1	98	86.790	Rhinopithecus_bieti
ENSCCAG00000022263	TRMT1	99	90.407	ENSRROG00000028599	TRMT1	98	86.636	Rhinopithecus_roxellana
ENSCCAG00000022263	TRMT1	98	69.737	ENSRROG00000031847	-	98	68.297	Rhinopithecus_roxellana
ENSCCAG00000022263	TRMT1	82	36.330	YDR120C	-	92	37.064	Saccharomyces_cerevisiae
ENSCCAG00000022263	TRMT1	100	96.618	ENSSBOG00000028861	TRMT1	100	96.618	Saimiri_boliviensis_boliviensis
ENSCCAG00000022263	TRMT1	92	75.261	ENSSHAG00000014381	TRMT1	97	73.333	Sarcophilus_harrisii
ENSCCAG00000022263	TRMT1	92	65.271	ENSSFOG00015004139	trmt1	84	65.271	Scleropages_formosus
ENSCCAG00000022263	TRMT1	92	64.111	ENSSMAG00000021136	trmt1	85	64.111	Scophthalmus_maximus
ENSCCAG00000022263	TRMT1	92	64.098	ENSSDUG00000012740	trmt1	84	64.098	Seriola_dumerili
ENSCCAG00000022263	TRMT1	92	63.923	ENSSLDG00000005971	trmt1	84	63.923	Seriola_lalandi_dorsalis
ENSCCAG00000022263	TRMT1	86	82.739	ENSSARG00000005138	TRMT1	99	80.214	Sorex_araneus
ENSCCAG00000022263	TRMT1	93	53.082	ENSSPUG00000001084	TRMT1	91	53.767	Sphenodon_punctatus
ENSCCAG00000022263	TRMT1	92	62.347	ENSSPAG00000007153	trmt1	94	62.347	Stegastes_partitus
ENSCCAG00000022263	TRMT1	99	85.737	ENSSSCG00000013744	TRMT1	97	85.737	Sus_scrofa
ENSCCAG00000022263	TRMT1	91	60.832	ENSTRUG00000010700	trmt1	86	61.352	Takifugu_rubripes
ENSCCAG00000022263	TRMT1	92	63.002	ENSTNIG00000018808	trmt1	98	63.002	Tetraodon_nigroviridis
ENSCCAG00000022263	TRMT1	99	82.792	ENSTTRG00000006379	TRMT1	99	79.755	Tursiops_truncatus
ENSCCAG00000022263	TRMT1	99	84.691	ENSUAMG00000022911	TRMT1	99	82.602	Ursus_americanus
ENSCCAG00000022263	TRMT1	99	84.279	ENSUMAG00000006027	TRMT1	97	84.279	Ursus_maritimus
ENSCCAG00000022263	TRMT1	99	86.224	ENSVVUG00000024177	TRMT1	98	83.436	Vulpes_vulpes
ENSCCAG00000022263	TRMT1	74	68.980	ENSXETG00000033863	TRMT1	92	68.980	Xenopus_tropicalis
ENSCCAG00000022263	TRMT1	92	65.149	ENSXCOG00000015733	trmt1	88	65.674	Xiphophorus_couchianus
ENSCCAG00000022263	TRMT1	92	64.634	ENSXMAG00000013823	trmt1	98	65.157	Xiphophorus_maculatus