EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000022316 (Gene tree)
Gene ID: 108288430
Gene Symbol: YTHDF3
Alias: FLJ31657
Full Name: YTH N6-methyladenosine RNA binding protein 3
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 41873 bases
Position: chrKV389799.1:1308579-1350451
Accession: 108288430
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000009224	YTH	PF04146.15	2.9e-40	1	1
ENSCCAP00000009219	YTH	PF04146.15	3.3e-40	1	1
ENSCCAP00000009185	YTH	PF04146.15	3.6e-40	1	1
ENSCCAP00000009169	YTH	PF04146.15	3.6e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000026551	YTHDF3-201	5316	XM_017507357	ENSCCAP00000009169	588 (aa)	XP_017362846	A0A2K5PZV6
ENSCCAT00000026601	YTHDF3-204	1731	-	ENSCCAP00000009219	576 (aa)	-	A0A2K5Q017
ENSCCAT00000026567	YTHDF3-202	5169	XM_017507359	ENSCCAP00000009185	585 (aa)	XP_017362848	A0A2K5PZX6
ENSCCAT00000026577	YTHDF3-203	159	-	ENSCCAP00000009195	52 (aa)	-	A0A2K5PZY3
ENSCCAT00000026606	YTHDF3-205	5748	XM_017507360	ENSCCAP00000009224	534 (aa)	XP_017362849	A0A2K5Q022

Gene Model

Click here to download ENSCCAG00000022316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000022316's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000022316	YTHDF3	99	66.724	ENSCCAG00000024650	YTHDF1	96	66.372

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000022316	YTHDF3	100	99.660	ENSG00000185728	YTHDF3	100	100.000	Homo_sapiens
ENSCCAG00000022316	YTHDF3	100	98.462	ENSAMEG00000018113	YTHDF3	100	98.462	Ailuropoda_melanoleuca
ENSCCAG00000022316	YTHDF3	99	69.943	ENSATEG00000011478	ythdf3	96	92.347	Anabas_testudineus
ENSCCAG00000022316	YTHDF3	99	93.928	ENSAPLG00000011329	YTHDF3	97	93.226	Anas_platyrhynchos
ENSCCAG00000022316	YTHDF3	100	92.991	ENSACAG00000016837	YTHDF3	100	92.308	Anolis_carolinensis
ENSCCAG00000022316	YTHDF3	100	99.830	ENSANAG00000037920	YTHDF3	100	99.830	Aotus_nancymaae
ENSCCAG00000022316	YTHDF3	99	81.356	ENSAMXG00000030366	ythdf3	97	76.871	Astyanax_mexicanus
ENSCCAG00000022316	YTHDF3	100	98.315	ENSBTAG00000018557	YTHDF3	100	98.291	Bos_taurus
ENSCCAG00000022316	YTHDF3	100	99.830	ENSCJAG00000009217	YTHDF3	100	99.830	Callithrix_jacchus
ENSCCAG00000022316	YTHDF3	100	99.064	ENSCAFG00000007215	YTHDF3	100	98.980	Canis_familiaris
ENSCCAG00000022316	YTHDF3	100	99.145	ENSCAFG00020015995	YTHDF3	100	99.145	Canis_lupus_dingo
ENSCCAG00000022316	YTHDF3	100	98.689	ENSCHIG00000026460	YTHDF3	100	98.632	Capra_hircus
ENSCCAG00000022316	YTHDF3	100	98.689	ENSTSYG00000009117	YTHDF3	100	98.639	Carlito_syrichta
ENSCCAG00000022316	YTHDF3	100	98.127	ENSCAPG00000014006	YTHDF3	100	98.267	Cavia_aperea
ENSCCAG00000022316	YTHDF3	100	98.974	ENSCPOG00000002961	YTHDF3	100	98.974	Cavia_porcellus
ENSCCAG00000022316	YTHDF3	100	99.660	ENSCATG00000038669	YTHDF3	100	99.660	Cercocebus_atys
ENSCCAG00000022316	YTHDF3	100	98.876	ENSCLAG00000002515	YTHDF3	100	98.787	Chinchilla_lanigera
ENSCCAG00000022316	YTHDF3	100	99.487	ENSCSAG00000014280	YTHDF3	100	99.487	Chlorocebus_sabaeus
ENSCCAG00000022316	YTHDF3	99	98.110	ENSCHOG00000010194	YTHDF3	100	96.724	Choloepus_hoffmanni
ENSCCAG00000022316	YTHDF3	100	96.246	ENSCPBG00000021405	YTHDF3	100	96.246	Chrysemys_picta_bellii
ENSCCAG00000022316	YTHDF3	100	99.660	ENSCANG00000032631	YTHDF3	100	99.660	Colobus_angolensis_palliatus
ENSCCAG00000022316	YTHDF3	100	98.315	ENSCGRG00001021204	Ythdf3	100	98.291	Cricetulus_griseus_chok1gshd
ENSCCAG00000022316	YTHDF3	100	97.940	ENSCGRG00000005613	-	100	97.920	Cricetulus_griseus_crigri
ENSCCAG00000022316	YTHDF3	74	67.595	ENSCGRG00000008289	-	64	73.932	Cricetulus_griseus_crigri
ENSCCAG00000022316	YTHDF3	100	78.571	ENSDARG00000057939	ythdf3	100	76.432	Danio_rerio
ENSCCAG00000022316	YTHDF3	100	97.963	ENSDNOG00000037156	YTHDF3	100	97.963	Dasypus_novemcinctus
ENSCCAG00000022316	YTHDF3	100	98.974	ENSDORG00000014699	Ythdf3	100	98.974	Dipodomys_ordii
ENSCCAG00000022316	YTHDF3	99	98.479	ENSETEG00000007144	YTHDF3	100	98.421	Echinops_telfairi
ENSCCAG00000022316	YTHDF3	100	99.487	ENSEASG00005016224	YTHDF3	100	99.487	Equus_asinus_asinus
ENSCCAG00000022316	YTHDF3	100	99.487	ENSECAG00000011093	YTHDF3	100	99.487	Equus_caballus
ENSCCAG00000022316	YTHDF3	100	99.145	ENSFCAG00000025314	YTHDF3	100	99.145	Felis_catus
ENSCCAG00000022316	YTHDF3	100	94.195	ENSFALG00000005503	YTHDF3	100	93.071	Ficedula_albicollis
ENSCCAG00000022316	YTHDF3	100	98.876	ENSFDAG00000002735	YTHDF3	100	98.960	Fukomys_damarensis
ENSCCAG00000022316	YTHDF3	100	74.675	ENSFHEG00000016395	ythdf3	89	75.142	Fundulus_heteroclitus
ENSCCAG00000022316	YTHDF3	100	96.068	ENSGALG00000039774	YTHDF3	100	96.068	Gallus_gallus
ENSCCAG00000022316	YTHDF3	100	96.075	ENSGAGG00000003851	YTHDF3	100	96.075	Gopherus_agassizii
ENSCCAG00000022316	YTHDF3	100	99.660	ENSGGOG00000027681	YTHDF3	100	99.660	Gorilla_gorilla
ENSCCAG00000022316	YTHDF3	100	98.974	ENSHGLG00000009954	YTHDF3	100	98.974	Heterocephalus_glaber_female
ENSCCAG00000022316	YTHDF3	100	98.876	ENSHGLG00100012403	YTHDF3	100	98.960	Heterocephalus_glaber_male
ENSCCAG00000022316	YTHDF3	100	78.444	ENSIPUG00000014157	YTHDF1	97	79.153	Ictalurus_punctatus
ENSCCAG00000022316	YTHDF3	100	98.632	ENSSTOG00000027792	YTHDF3	100	98.632	Ictidomys_tridecemlineatus
ENSCCAG00000022316	YTHDF3	100	99.064	ENSJJAG00000017742	Ythdf3	100	99.133	Jaculus_jaculus
ENSCCAG00000022316	YTHDF3	100	85.206	ENSLACG00000002281	YTHDF3	100	83.639	Latimeria_chalumnae
ENSCCAG00000022316	YTHDF3	100	98.502	ENSLAFG00000016052	YTHDF3	100	96.812	Loxodonta_africana
ENSCCAG00000022316	YTHDF3	100	99.660	ENSMFAG00000043451	YTHDF3	100	99.660	Macaca_fascicularis
ENSCCAG00000022316	YTHDF3	100	99.658	ENSMMUG00000006729	YTHDF3	100	99.658	Macaca_mulatta
ENSCCAG00000022316	YTHDF3	100	99.658	ENSMNEG00000031200	YTHDF3	100	99.658	Macaca_nemestrina
ENSCCAG00000022316	YTHDF3	100	99.660	ENSMLEG00000036763	YTHDF3	100	99.660	Mandrillus_leucophaeus
ENSCCAG00000022316	YTHDF3	100	94.007	ENSMGAG00000011168	YTHDF3	100	92.650	Meleagris_gallopavo
ENSCCAG00000022316	YTHDF3	73	94.087	ENSMAUG00000012560	Ythdf3	99	93.299	Mesocricetus_auratus
ENSCCAG00000022316	YTHDF3	74	78.228	ENSMICG00000009379	-	100	75.696	Microcebus_murinus
ENSCCAG00000022316	YTHDF3	100	99.438	ENSMICG00000036869	-	100	99.320	Microcebus_murinus
ENSCCAG00000022316	YTHDF3	100	98.315	ENSMOCG00000011947	Ythdf3	100	98.094	Microtus_ochrogaster
ENSCCAG00000022316	YTHDF3	99	70.489	ENSMMOG00000003402	ythdf3	95	89.000	Mola_mola
ENSCCAG00000022316	YTHDF3	100	97.440	ENSMODG00000008255	YTHDF3	100	97.440	Monodelphis_domestica
ENSCCAG00000022316	YTHDF3	99	70.621	ENSMALG00000000147	ythdf3	92	91.892	Monopterus_albus
ENSCCAG00000022316	YTHDF3	100	98.502	MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.462	Mus_caroli
ENSCCAG00000022316	YTHDF3	100	98.502	ENSMUSG00000047213	Ythdf3	100	98.462	Mus_musculus
ENSCCAG00000022316	YTHDF3	100	97.949	MGP_PahariEiJ_G0026310	Ythdf3	100	97.949	Mus_pahari
ENSCCAG00000022316	YTHDF3	100	98.315	MGP_SPRETEiJ_G0025794	Ythdf3	100	98.291	Mus_spretus
ENSCCAG00000022316	YTHDF3	100	99.145	ENSMPUG00000009857	YTHDF3	100	99.145	Mustela_putorius_furo
ENSCCAG00000022316	YTHDF3	99	98.795	ENSMLUG00000006541	YTHDF3	99	98.795	Myotis_lucifugus
ENSCCAG00000022316	YTHDF3	99	98.682	ENSNGAG00000018434	Ythdf3	96	98.694	Nannospalax_galili
ENSCCAG00000022316	YTHDF3	100	99.490	ENSNLEG00000003872	YTHDF3	100	99.490	Nomascus_leucogenys
ENSCCAG00000022316	YTHDF3	99	96.902	ENSMEUG00000011285	YTHDF3	100	96.902	Notamacropus_eugenii
ENSCCAG00000022316	YTHDF3	100	97.940	ENSODEG00000002033	YTHDF3	100	98.094	Octodon_degus
ENSCCAG00000022316	YTHDF3	100	92.897	ENSOANG00000005053	YTHDF3	100	91.050	Ornithorhynchus_anatinus
ENSCCAG00000022316	YTHDF3	100	99.625	ENSOCUG00000008723	YTHDF3	100	97.983	Oryctolagus_cuniculus
ENSCCAG00000022316	YTHDF3	100	75.325	ENSOMEG00000008212	ythdf3	99	75.643	Oryzias_melastigma
ENSCCAG00000022316	YTHDF3	99	98.801	ENSOGAG00000002302	YTHDF3	99	98.801	Otolemur_garnettii
ENSCCAG00000022316	YTHDF3	100	98.689	ENSOARG00000016882	YTHDF3	98	98.261	Ovis_aries
ENSCCAG00000022316	YTHDF3	100	99.320	ENSPPAG00000043483	YTHDF3	100	99.320	Pan_paniscus
ENSCCAG00000022316	YTHDF3	100	99.145	ENSPPRG00000004665	YTHDF3	100	99.145	Panthera_pardus
ENSCCAG00000022316	YTHDF3	100	99.064	ENSPTIG00000021537	YTHDF3	100	99.064	Panthera_tigris_altaica
ENSCCAG00000022316	YTHDF3	100	99.490	ENSPTRG00000049135	YTHDF3	100	99.490	Pan_troglodytes
ENSCCAG00000022316	YTHDF3	100	99.660	ENSPANG00000008030	YTHDF3	100	99.660	Papio_anubis
ENSCCAG00000022316	YTHDF3	99	80.862	ENSPKIG00000008298	ythdf3	96	81.239	Paramormyrops_kingsleyae
ENSCCAG00000022316	YTHDF3	100	95.222	ENSPSIG00000015861	YTHDF3	100	94.198	Pelodiscus_sinensis
ENSCCAG00000022316	YTHDF3	100	98.689	ENSPEMG00000020975	Ythdf3	100	98.614	Peromyscus_maniculatus_bairdii
ENSCCAG00000022316	YTHDF3	100	97.611	ENSPCIG00000017629	YTHDF3	100	97.611	Phascolarctos_cinereus
ENSCCAG00000022316	YTHDF3	91	100.000	ENSPPYG00000018626	YTHDF3	90	100.000	Pongo_abelii
ENSCCAG00000022316	YTHDF3	99	98.448	ENSPCAG00000016282	YTHDF3	100	98.448	Procavia_capensis
ENSCCAG00000022316	YTHDF3	100	99.487	ENSPCOG00000004856	YTHDF3	100	99.487	Propithecus_coquereli
ENSCCAG00000022316	YTHDF3	85	99.468	ENSPVAG00000002740	YTHDF3	86	98.936	Pteropus_vampyrus
ENSCCAG00000022316	YTHDF3	87	86.087	ENSPNYG00000002949	ythdf3	96	86.697	Pundamilia_nyererei
ENSCCAG00000022316	YTHDF3	100	98.315	ENSRNOG00000010084	Ythdf3	100	98.291	Rattus_norvegicus
ENSCCAG00000022316	YTHDF3	100	99.830	ENSRBIG00000036465	YTHDF3	100	99.830	Rhinopithecus_bieti
ENSCCAG00000022316	YTHDF3	100	99.658	ENSRROG00000035231	YTHDF3	100	99.658	Rhinopithecus_roxellana
ENSCCAG00000022316	YTHDF3	100	99.829	ENSSBOG00000035287	YTHDF3	100	99.829	Saimiri_boliviensis_boliviensis
ENSCCAG00000022316	YTHDF3	100	96.763	ENSSHAG00000009482	YTHDF3	100	96.763	Sarcophilus_harrisii
ENSCCAG00000022316	YTHDF3	99	99.241	ENSSARG00000007626	YTHDF3	99	99.298	Sorex_araneus
ENSCCAG00000022316	YTHDF3	99	96.034	ENSSPUG00000009390	YTHDF3	99	96.034	Sphenodon_punctatus
ENSCCAG00000022316	YTHDF3	100	99.438	ENSSSCG00000033144	YTHDF3	100	99.438	Sus_scrofa
ENSCCAG00000022316	YTHDF3	98	96.085	ENSTGUG00000011243	YTHDF3	98	96.085	Taeniopygia_guttata
ENSCCAG00000022316	YTHDF3	80	98.578	ENSTBEG00000005747	YTHDF3	81	98.578	Tupaia_belangeri
ENSCCAG00000022316	YTHDF3	99	89.828	ENSTTRG00000014564	YTHDF3	98	88.908	Tursiops_truncatus
ENSCCAG00000022316	YTHDF3	100	99.316	ENSUAMG00000012624	YTHDF3	100	99.316	Ursus_americanus
ENSCCAG00000022316	YTHDF3	100	99.251	ENSUMAG00000014104	YTHDF3	100	99.150	Ursus_maritimus
ENSCCAG00000022316	YTHDF3	99	85.472	ENSVPAG00000008104	YTHDF3	98	84.183	Vicugna_pacos
ENSCCAG00000022316	YTHDF3	100	99.145	ENSVVUG00000018384	YTHDF3	100	99.145	Vulpes_vulpes
ENSCCAG00000022316	YTHDF3	100	88.718	ENSXETG00000021659	ythdf3	100	88.889	Xenopus_tropicalis
ENSCCAG00000022316	YTHDF3	100	73.118	ENSXCOG00000009687	ythdf3	99	75.945	Xiphophorus_couchianus
ENSCCAG00000022316	YTHDF3	100	75.285	ENSXMAG00000009698	ythdf3	99	76.289	Xiphophorus_maculatus