EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000022701 (Gene tree)
Gene ID: 108292976
Gene Symbol: -
Alias: -
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 14323 bases
Position: chrKV389943.1:663296-677618
Accession: 108292976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000009924	RRM_1	PF00076.22	1.1e-16	1	2
ENSCCAP00000009924	RRM_1	PF00076.22	1.1e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000027311	-	2773	XM_017514154	ENSCCAP00000009924	743 (aa)	XP_017369643	A0A2K5Q217

Gene Model

Click here to download ENSCCAG00000022701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000022701's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000022701	-	99	91.633	ENSCCAG00000025329	-	99	91.633

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000022701	-	99	92.647	ENSG00000102241	HTATSF1	100	95.492	Homo_sapiens
ENSCCAG00000022701	-	55	61.502	ENSAPOG00000009823	htatsf1	92	61.502	Acanthochromis_polyacanthus
ENSCCAG00000022701	-	99	78.831	ENSAMEG00000002921	HTATSF1	99	79.431	Ailuropoda_melanoleuca
ENSCCAG00000022701	-	50	63.846	ENSAOCG00000020994	htatsf1	92	59.908	Amphiprion_ocellaris
ENSCCAG00000022701	-	50	63.846	ENSAPEG00000016432	htatsf1	88	61.650	Amphiprion_percula
ENSCCAG00000022701	-	52	61.594	ENSATEG00000008903	htatsf1	82	62.133	Anabas_testudineus
ENSCCAG00000022701	-	94	92.826	ENSANAG00000025458	-	100	91.966	Aotus_nancymaae
ENSCCAG00000022701	-	100	82.392	ENSANAG00000027986	-	100	82.124	Aotus_nancymaae
ENSCCAG00000022701	-	54	60.422	ENSACLG00000008096	htatsf1	81	62.466	Astatotilapia_calliptera
ENSCCAG00000022701	-	50	63.307	ENSAMXG00000008387	htatsf1	78	63.587	Astyanax_mexicanus
ENSCCAG00000022701	-	99	79.297	ENSBTAG00000054942	HTATSF1	99	78.859	Bos_taurus
ENSCCAG00000022701	-	99	74.967	ENSBTAG00000032711	HTATSF1	99	76.676	Bos_taurus
ENSCCAG00000022701	-	99	79.297	ENSBTAG00000055212	HTATSF1	99	78.859	Bos_taurus
ENSCCAG00000022701	-	100	95.565	ENSCJAG00000003676	HTATSF1	100	95.565	Callithrix_jacchus
ENSCCAG00000022701	-	99	80.186	ENSCAFG00000023294	HTATSF1	99	80.795	Canis_familiaris
ENSCCAG00000022701	-	99	78.571	ENSCAFG00020024635	HTATSF1	99	79.043	Canis_lupus_dingo
ENSCCAG00000022701	-	99	80.800	ENSCHIG00000000312	HTATSF1	99	80.345	Capra_hircus
ENSCCAG00000022701	-	99	84.953	ENSTSYG00000028876	HTATSF1	99	85.033	Carlito_syrichta
ENSCCAG00000022701	-	99	92.627	ENSCATG00000029963	HTATSF1	99	93.085	Cercocebus_atys
ENSCCAG00000022701	-	99	75.099	ENSCLAG00000002718	HTATSF1	99	75.889	Chinchilla_lanigera
ENSCCAG00000022701	-	99	92.761	ENSCSAG00000007505	HTATSF1	99	93.218	Chlorocebus_sabaeus
ENSCCAG00000022701	-	99	92.761	ENSCANG00000028495	HTATSF1	99	93.218	Colobus_angolensis_palliatus
ENSCCAG00000022701	-	81	76.274	ENSCGRG00001021602	Htatsf1	99	73.469	Cricetulus_griseus_chok1gshd
ENSCCAG00000022701	-	73	69.381	ENSCGRG00000002085	Htatsf1	99	67.684	Cricetulus_griseus_crigri
ENSCCAG00000022701	-	99	77.647	ENSDNOG00000002254	HTATSF1	99	79.843	Dasypus_novemcinctus
ENSCCAG00000022701	-	99	40.344	ENSETEG00000006377	-	83	49.170	Echinops_telfairi
ENSCCAG00000022701	-	50	51.122	ENSEBUG00000001534	htatsf1	76	50.914	Eptatretus_burgeri
ENSCCAG00000022701	-	99	78.385	ENSEASG00005003440	HTATSF1	99	79.663	Equus_asinus_asinus
ENSCCAG00000022701	-	99	78.385	ENSECAG00000009156	HTATSF1	99	79.663	Equus_caballus
ENSCCAG00000022701	-	99	66.711	ENSEEUG00000010668	HTATSF1	99	66.928	Erinaceus_europaeus
ENSCCAG00000022701	-	99	80.265	ENSFCAG00000031924	HTATSF1	99	80.795	Felis_catus
ENSCCAG00000022701	-	51	67.876	ENSFALG00000003728	HTATSF1	87	67.424	Ficedula_albicollis
ENSCCAG00000022701	-	99	73.810	ENSFDAG00000008617	HTATSF1	99	75.427	Fukomys_damarensis
ENSCCAG00000022701	-	50	64.557	ENSFHEG00000020286	htatsf1	83	63.660	Fundulus_heteroclitus
ENSCCAG00000022701	-	50	69.010	ENSGALG00000006410	HTATSF1	87	67.588	Gallus_gallus
ENSCCAG00000022701	-	99	92.647	ENSGGOG00000026072	HTATSF1	99	92.952	Gorilla_gorilla
ENSCCAG00000022701	-	54	60.187	ENSHBUG00000004392	htatsf1	94	58.161	Haplochromis_burtoni
ENSCCAG00000022701	-	98	76.707	ENSHGLG00000005328	HTATSF1	99	77.807	Heterocephalus_glaber_female
ENSCCAG00000022701	-	50	61.917	ENSHCOG00000009056	htatsf1	94	59.286	Hippocampus_comes
ENSCCAG00000022701	-	99	79.515	ENSSTOG00000012505	HTATSF1	99	81.152	Ictidomys_tridecemlineatus
ENSCCAG00000022701	-	54	41.805	ENSLOCG00000015118	htatsf1	88	41.346	Lepisosteus_oculatus
ENSCCAG00000022701	-	99	71.011	ENSLAFG00000014307	HTATSF1	99	70.767	Loxodonta_africana
ENSCCAG00000022701	-	99	92.493	ENSMFAG00000044705	HTATSF1	99	92.952	Macaca_fascicularis
ENSCCAG00000022701	-	99	92.627	ENSMMUG00000006450	HTATSF1	99	93.085	Macaca_mulatta
ENSCCAG00000022701	-	99	85.346	ENSMNEG00000024084	HTATSF1	99	85.868	Macaca_nemestrina
ENSCCAG00000022701	-	99	92.359	ENSMLEG00000035511	HTATSF1	99	92.819	Mandrillus_leucophaeus
ENSCCAG00000022701	-	50	63.660	ENSMAMG00000021225	htatsf1	81	63.315	Mastacembelus_armatus
ENSCCAG00000022701	-	54	60.422	ENSMZEG00005000485	htatsf1	94	58.391	Maylandia_zebra
ENSCCAG00000022701	-	99	73.228	ENSMAUG00000007235	Htatsf1	99	74.147	Mesocricetus_auratus
ENSCCAG00000022701	-	99	83.444	ENSMICG00000009348	HTATSF1	99	84.901	Microcebus_murinus
ENSCCAG00000022701	-	99	70.872	ENSMOCG00000022370	-	95	70.800	Microtus_ochrogaster
ENSCCAG00000022701	-	99	72.680	ENSMOCG00000023007	-	99	73.072	Microtus_ochrogaster
ENSCCAG00000022701	-	53	69.173	ENSMODG00000014087	-	87	69.114	Monodelphis_domestica
ENSCCAG00000022701	-	55	58.065	ENSMALG00000019977	htatsf1	94	58.065	Monopterus_albus
ENSCCAG00000022701	-	99	73.386	MGP_CAROLIEiJ_G0033094	Htatsf1	99	73.913	Mus_caroli
ENSCCAG00000022701	-	97	75.646	ENSMUSG00000067873	Htatsf1	99	75.494	Mus_musculus
ENSCCAG00000022701	-	97	75.510	MGP_SPRETEiJ_G0034249	Htatsf1	99	75.362	Mus_spretus
ENSCCAG00000022701	-	99	77.361	ENSMPUG00000001901	HTATSF1	99	79.172	Mustela_putorius_furo
ENSCCAG00000022701	-	99	72.409	ENSMLUG00000009234	-	100	72.222	Myotis_lucifugus
ENSCCAG00000022701	-	99	75.894	ENSMLUG00000028418	-	99	75.658	Myotis_lucifugus
ENSCCAG00000022701	-	97	76.870	ENSNGAG00000017831	Htatsf1	99	77.480	Nannospalax_galili
ENSCCAG00000022701	-	99	92.513	ENSNLEG00000002746	HTATSF1	99	92.819	Nomascus_leucogenys
ENSCCAG00000022701	-	53	69.697	ENSMEUG00000004133	-	95	69.697	Notamacropus_eugenii
ENSCCAG00000022701	-	99	80.395	ENSOCUG00000012570	HTATSF1	99	81.159	Oryctolagus_cuniculus
ENSCCAG00000022701	-	50	64.031	ENSORLG00000002356	htatsf1	84	64.031	Oryzias_latipes
ENSCCAG00000022701	-	50	64.286	ENSORLG00020017818	htatsf1	85	61.594	Oryzias_latipes_hni
ENSCCAG00000022701	-	50	63.427	ENSORLG00015002268	htatsf1	84	63.427	Oryzias_latipes_hsok
ENSCCAG00000022701	-	50	63.239	ENSOMEG00000007564	htatsf1	80	62.534	Oryzias_melastigma
ENSCCAG00000022701	-	98	80.537	ENSOGAG00000005565	HTATSF1	99	81.638	Otolemur_garnettii
ENSCCAG00000022701	-	99	74.642	ENSOARG00000000481	-	99	74.675	Ovis_aries
ENSCCAG00000022701	-	99	78.776	ENSOARG00000011215	-	99	78.340	Ovis_aries
ENSCCAG00000022701	-	99	92.781	ENSPPAG00000024268	HTATSF1	99	93.085	Pan_paniscus
ENSCCAG00000022701	-	99	80.397	ENSPPRG00000014209	HTATSF1	99	80.927	Panthera_pardus
ENSCCAG00000022701	-	92	80.000	ENSPTIG00000016887	HTATSF1	95	80.571	Panthera_tigris_altaica
ENSCCAG00000022701	-	99	92.781	ENSPTRG00000044591	HTATSF1	99	93.085	Pan_troglodytes
ENSCCAG00000022701	-	99	79.416	ENSPANG00000010946	HTATSF1	99	79.974	Papio_anubis
ENSCCAG00000022701	-	50	66.931	ENSPKIG00000024852	htatsf1	79	66.017	Paramormyrops_kingsleyae
ENSCCAG00000022701	-	97	74.764	ENSPEMG00000022397	Htatsf1	99	73.560	Peromyscus_maniculatus_bairdii
ENSCCAG00000022701	-	56	63.146	ENSPCIG00000018896	-	94	63.033	Phascolarctos_cinereus
ENSCCAG00000022701	-	57	63.387	ENSPCIG00000030173	-	99	63.387	Phascolarctos_cinereus
ENSCCAG00000022701	-	50	64.691	ENSPFOG00000007871	htatsf1	78	64.130	Poecilia_formosa
ENSCCAG00000022701	-	50	64.341	ENSPLAG00000007532	htatsf1	81	63.587	Poecilia_latipinna
ENSCCAG00000022701	-	50	64.858	ENSPMEG00000000352	htatsf1	81	63.859	Poecilia_mexicana
ENSCCAG00000022701	-	50	65.375	ENSPREG00000007811	htatsf1	81	64.674	Poecilia_reticulata
ENSCCAG00000022701	-	88	90.332	ENSPPYG00000020765	HTATSF1	88	90.332	Pongo_abelii
ENSCCAG00000022701	-	93	71.076	ENSPCAG00000010576	HTATSF1	99	67.244	Procavia_capensis
ENSCCAG00000022701	-	100	85.714	ENSPCOG00000021823	HTATSF1	100	86.111	Propithecus_coquereli
ENSCCAG00000022701	-	99	73.861	ENSPVAG00000010281	HTATSF1	99	73.733	Pteropus_vampyrus
ENSCCAG00000022701	-	54	60.422	ENSPNYG00000016693	htatsf1	81	62.466	Pundamilia_nyererei
ENSCCAG00000022701	-	99	72.365	ENSRNOG00000027761	Htatsf1	99	68.696	Rattus_norvegicus
ENSCCAG00000022701	-	99	81.769	ENSRBIG00000035486	HTATSF1	99	81.782	Rhinopithecus_bieti
ENSCCAG00000022701	-	99	92.359	ENSRROG00000021939	HTATSF1	99	92.819	Rhinopithecus_roxellana
ENSCCAG00000022701	-	99	97.305	ENSSBOG00000027186	-	99	97.305	Saimiri_boliviensis_boliviensis
ENSCCAG00000022701	-	99	91.263	ENSSBOG00000017914	-	99	91.263	Saimiri_boliviensis_boliviensis
ENSCCAG00000022701	-	51	69.474	ENSSHAG00000006440	-	97	69.474	Sarcophilus_harrisii
ENSCCAG00000022701	-	55	66.180	ENSSHAG00000018908	-	90	66.180	Sarcophilus_harrisii
ENSCCAG00000022701	-	50	64.211	ENSSFOG00015012002	htatsf1	81	64.211	Scleropages_formosus
ENSCCAG00000022701	-	54	60.187	ENSSLDG00000016880	htatsf1	93	60.187	Seriola_lalandi_dorsalis
ENSCCAG00000022701	-	98	64.151	ENSSARG00000005193	HTATSF1	99	63.564	Sorex_araneus
ENSCCAG00000022701	-	51	68.653	ENSSPUG00000014767	HTATSF1	84	68.653	Sphenodon_punctatus
ENSCCAG00000022701	-	99	73.289	ENSSSCG00000023062	HTATSF1	99	74.133	Sus_scrofa
ENSCCAG00000022701	-	50	68.229	ENSTGUG00000002099	HTATSF1	87	67.337	Taeniopygia_guttata
ENSCCAG00000022701	-	85	71.875	ENSTTRG00000002269	HTATSF1	99	72.327	Tursiops_truncatus
ENSCCAG00000022701	-	99	80.952	ENSUAMG00000012048	HTATSF1	99	81.481	Ursus_americanus
ENSCCAG00000022701	-	99	79.172	ENSUMAG00000010393	HTATSF1	99	79.690	Ursus_maritimus
ENSCCAG00000022701	-	91	75.942	ENSVPAG00000004569	HTATSF1	99	75.793	Vicugna_pacos
ENSCCAG00000022701	-	99	78.312	ENSVVUG00000024802	HTATSF1	99	78.784	Vulpes_vulpes
ENSCCAG00000022701	-	50	66.220	ENSXCOG00000006912	htatsf1	81	65.537	Xiphophorus_couchianus
ENSCCAG00000022701	-	50	66.138	ENSXMAG00000000490	htatsf1	81	65.642	Xiphophorus_maculatus