EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000023031 (Gene tree)
Gene ID: 108308158
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 673922 bases
Position: chrKV389430.1:4120542-4794463
Accession: 108308158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000010671	Fox-1_C	PF12414.8	1e-42	1	1
ENSCCAP00000010658	Fox-1_C	PF12414.8	1.8e-40	1	1
ENSCCAP00000010732	Fox-1_C	PF12414.8	2.2e-40	1	1
ENSCCAP00000010722	Fox-1_C	PF12414.8	2.3e-40	1	1
ENSCCAP00000010727	Fox-1_C	PF12414.8	3.1e-40	1	1
ENSCCAP00000010671	RRM_1	PF00076.22	4.1e-18	1	1
ENSCCAP00000010658	RRM_1	PF00076.22	4.3e-18	1	1
ENSCCAP00000010727	RRM_1	PF00076.22	5e-18	1	1
ENSCCAP00000010722	RRM_1	PF00076.22	6.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000028124	RBFOX1-204	1287	XM_017533845	ENSCCAP00000010727	428 (aa)	XP_017389334	A0A2K5Q4B6
ENSCCAT00000028118	RBFOX1-203	1083	XM_017534017	ENSCCAP00000010722	360 (aa)	XP_017389506	A0A2K5Q4B4
ENSCCAT00000028067	RBFOX1-202	1128	XM_017533918	ENSCCAP00000010671	375 (aa)	XP_017389407	A0A2K5Q446
ENSCCAT00000028054	RBFOX1-201	1257	XM_017533894	ENSCCAP00000010658	418 (aa)	XP_017389383	A0A2K5Q440
ENSCCAT00000028129	RBFOX1-205	1050	-	ENSCCAP00000010732	349 (aa)	-	A0A2K5Q4C1

Gene Model

Click here to download ENSCCAG00000023031's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000023031's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000023031	RBFOX1	79	78.000	ENSCCAG00000028450	RBFOX3	100	76.825
ENSCCAG00000023031	RBFOX1	97	63.235	ENSCCAG00000036584	RBFOX2	98	62.562

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000023031	RBFOX1	100	99.766	ENSG00000078328	RBFOX1	100	99.620	Homo_sapiens
ENSCCAG00000023031	RBFOX1	97	81.842	ENSAPOG00000003197	rbfox1	98	81.890	Acanthochromis_polyacanthus
ENSCCAG00000023031	RBFOX1	61	96.957	ENSAMEG00000008605	RBFOX1	100	95.600	Ailuropoda_melanoleuca
ENSCCAG00000023031	RBFOX1	64	71.747	ENSACIG00000005478	rbfox1	68	71.747	Amphilophus_citrinellus
ENSCCAG00000023031	RBFOX1	70	77.500	ENSAOCG00000008283	rbfox1	96	78.214	Amphiprion_ocellaris
ENSCCAG00000023031	RBFOX1	93	71.935	ENSAPEG00000010636	rbfox1	100	71.816	Amphiprion_percula
ENSCCAG00000023031	RBFOX1	70	76.761	ENSATEG00000007513	rbfox1	97	76.056	Anabas_testudineus
ENSCCAG00000023031	RBFOX1	94	92.602	ENSAPLG00000013263	RBFOX1	98	92.602	Anas_platyrhynchos
ENSCCAG00000023031	RBFOX1	97	84.949	ENSACAG00000004013	RBFOX1	98	86.005	Anolis_carolinensis
ENSCCAG00000023031	RBFOX1	100	100.000	ENSANAG00000029527	RBFOX1	100	100.000	Aotus_nancymaae
ENSCCAG00000023031	RBFOX1	58	89.041	ENSAMXG00000002431	rbfox1	64	89.041	Astyanax_mexicanus
ENSCCAG00000023031	RBFOX1	93	98.462	ENSBTAG00000007210	RBFOX1	98	98.462	Bos_taurus
ENSCCAG00000023031	RBFOX1	100	99.766	ENSCJAG00000017351	RBFOX1	100	99.522	Callithrix_jacchus
ENSCCAG00000023031	RBFOX1	100	98.325	ENSCAFG00000019082	RBFOX1	100	98.325	Canis_familiaris
ENSCCAG00000023031	RBFOX1	97	78.202	ENSCAFG00020024881	RBFOX1	83	98.649	Canis_lupus_dingo
ENSCCAG00000023031	RBFOX1	93	98.462	ENSCHIG00000023549	RBFOX1	98	98.462	Capra_hircus
ENSCCAG00000023031	RBFOX1	97	99.275	ENSTSYG00000005334	RBFOX1	100	99.422	Carlito_syrichta
ENSCCAG00000023031	RBFOX1	100	97.368	ENSCAPG00000017669	RBFOX1	100	97.368	Cavia_aperea
ENSCCAG00000023031	RBFOX1	100	97.368	ENSCPOG00000011314	RBFOX1	100	97.368	Cavia_porcellus
ENSCCAG00000023031	RBFOX1	100	99.766	ENSCATG00000033816	RBFOX1	100	99.522	Cercocebus_atys
ENSCCAG00000023031	RBFOX1	100	97.847	ENSCLAG00000012761	RBFOX1	100	97.847	Chinchilla_lanigera
ENSCCAG00000023031	RBFOX1	98	93.514	ENSCSAG00000008739	RBFOX1	98	98.649	Chlorocebus_sabaeus
ENSCCAG00000023031	RBFOX1	100	76.316	ENSCHOG00000012843	RBFOX1	100	76.316	Choloepus_hoffmanni
ENSCCAG00000023031	RBFOX1	97	95.330	ENSCPBG00000026626	RBFOX1	98	94.615	Chrysemys_picta_bellii
ENSCCAG00000023031	RBFOX1	100	99.766	ENSCANG00000033125	RBFOX1	100	99.522	Colobus_angolensis_palliatus
ENSCCAG00000023031	RBFOX1	100	97.129	ENSCGRG00001013729	Rbfox1	100	97.129	Cricetulus_griseus_chok1gshd
ENSCCAG00000023031	RBFOX1	100	97.129	ENSCGRG00000003272	Rbfox1	100	97.129	Cricetulus_griseus_crigri
ENSCCAG00000023031	RBFOX1	93	76.757	ENSCSEG00000008840	rbfox1	100	76.757	Cynoglossus_semilaevis
ENSCCAG00000023031	RBFOX1	97	88.430	ENSDARG00000014746	rbfox1	99	87.912	Danio_rerio
ENSCCAG00000023031	RBFOX1	96	94.045	ENSDNOG00000043612	RBFOX1	96	94.045	Dasypus_novemcinctus
ENSCCAG00000023031	RBFOX1	93	93.639	ENSDORG00000010024	Rbfox1	97	93.384	Dipodomys_ordii
ENSCCAG00000023031	RBFOX1	100	78.469	ENSETEG00000003771	RBFOX1	100	78.469	Echinops_telfairi
ENSCCAG00000023031	RBFOX1	97	98.765	ENSEASG00005011599	RBFOX1	98	99.231	Equus_asinus_asinus
ENSCCAG00000023031	RBFOX1	97	98.519	ENSECAG00000012667	RBFOX1	98	98.519	Equus_caballus
ENSCCAG00000023031	RBFOX1	100	53.581	ENSELUG00000013096	rbfox1	100	52.785	Esox_lucius
ENSCCAG00000023031	RBFOX1	99	99.164	ENSFCAG00000025322	RBFOX1	98	98.108	Felis_catus
ENSCCAG00000023031	RBFOX1	87	86.787	ENSFALG00000004027	RBFOX1	100	92.492	Ficedula_albicollis
ENSCCAG00000023031	RBFOX1	100	97.847	ENSFDAG00000007388	RBFOX1	100	97.847	Fukomys_damarensis
ENSCCAG00000023031	RBFOX1	100	93.301	ENSGALG00000034325	RBFOX1	100	93.301	Gallus_gallus
ENSCCAG00000023031	RBFOX1	100	92.823	ENSGAGG00000023681	RBFOX1	100	92.857	Gopherus_agassizii
ENSCCAG00000023031	RBFOX1	100	99.766	ENSGGOG00000016871	-	100	99.522	Gorilla_gorilla
ENSCCAG00000023031	RBFOX1	100	97.608	ENSHGLG00000016944	RBFOX1	100	97.608	Heterocephalus_glaber_female
ENSCCAG00000023031	RBFOX1	100	97.608	ENSHGLG00100003272	RBFOX1	100	97.608	Heterocephalus_glaber_male
ENSCCAG00000023031	RBFOX1	83	77.188	ENSHCOG00000016419	rbfox1	91	77.188	Hippocampus_comes
ENSCCAG00000023031	RBFOX1	93	90.857	ENSIPUG00000015215	rbfox1	100	90.857	Ictalurus_punctatus
ENSCCAG00000023031	RBFOX1	100	96.890	ENSSTOG00000000322	RBFOX1	100	96.890	Ictidomys_tridecemlineatus
ENSCCAG00000023031	RBFOX1	100	94.258	ENSJJAG00000002575	Rbfox1	100	94.258	Jaculus_jaculus
ENSCCAG00000023031	RBFOX1	93	79.076	ENSLBEG00000014659	rbfox1	97	79.076	Labrus_bergylta
ENSCCAG00000023031	RBFOX1	97	86.041	ENSLOCG00000006675	rbfox1	99	86.041	Lepisosteus_oculatus
ENSCCAG00000023031	RBFOX1	74	99.026	ENSLAFG00000011480	RBFOX1	100	99.026	Loxodonta_africana
ENSCCAG00000023031	RBFOX1	100	99.533	ENSMFAG00000036447	RBFOX1	100	99.282	Macaca_fascicularis
ENSCCAG00000023031	RBFOX1	100	99.533	ENSMMUG00000003458	RBFOX1	100	99.282	Macaca_mulatta
ENSCCAG00000023031	RBFOX1	100	99.533	ENSMNEG00000032034	RBFOX1	100	99.282	Macaca_nemestrina
ENSCCAG00000023031	RBFOX1	100	99.766	ENSMLEG00000015382	RBFOX1	100	99.522	Mandrillus_leucophaeus
ENSCCAG00000023031	RBFOX1	93	81.096	ENSMAMG00000003142	rbfox1	100	81.644	Mastacembelus_armatus
ENSCCAG00000023031	RBFOX1	68	88.421	ENSMGAG00000008606	RBFOX1	96	88.214	Meleagris_gallopavo
ENSCCAG00000023031	RBFOX1	95	54.570	ENSMAUG00000020570	Rbfox1	96	55.181	Mesocricetus_auratus
ENSCCAG00000023031	RBFOX1	100	99.533	ENSMICG00000034286	RBFOX1	100	98.667	Microcebus_murinus
ENSCCAG00000023031	RBFOX1	100	97.129	ENSMOCG00000020932	Rbfox1	100	97.129	Microtus_ochrogaster
ENSCCAG00000023031	RBFOX1	84	77.673	ENSMMOG00000009716	rbfox1	86	78.526	Mola_mola
ENSCCAG00000023031	RBFOX1	93	92.090	ENSMODG00000005826	RBFOX1	100	97.458	Monodelphis_domestica
ENSCCAG00000023031	RBFOX1	97	81.915	ENSMALG00000003337	rbfox1	98	81.600	Monopterus_albus
ENSCCAG00000023031	RBFOX1	100	97.368	MGP_CAROLIEiJ_G0020427	Rbfox1	100	97.368	Mus_caroli
ENSCCAG00000023031	RBFOX1	100	97.129	ENSMUSG00000008658	Rbfox1	100	98.496	Mus_musculus
ENSCCAG00000023031	RBFOX1	100	97.368	MGP_PahariEiJ_G0016135	Rbfox1	100	97.368	Mus_pahari
ENSCCAG00000023031	RBFOX1	100	96.890	MGP_SPRETEiJ_G0021321	Rbfox1	100	96.890	Mus_spretus
ENSCCAG00000023031	RBFOX1	97	93.188	ENSMPUG00000014822	RBFOX1	93	98.365	Mustela_putorius_furo
ENSCCAG00000023031	RBFOX1	74	96.753	ENSMLUG00000015896	RBFOX1	100	96.753	Myotis_lucifugus
ENSCCAG00000023031	RBFOX1	100	97.608	ENSNGAG00000023276	Rbfox1	100	97.608	Nannospalax_galili
ENSCCAG00000023031	RBFOX1	100	61.429	ENSNBRG00000011084	rbfox1	98	61.429	Neolamprologus_brichardi
ENSCCAG00000023031	RBFOX1	100	99.299	ENSNLEG00000010017	-	100	99.282	Nomascus_leucogenys
ENSCCAG00000023031	RBFOX1	100	80.144	ENSMEUG00000012525	RBFOX1	100	80.144	Notamacropus_eugenii
ENSCCAG00000023031	RBFOX1	88	96.957	ENSOPRG00000006199	-	100	80.144	Ochotona_princeps
ENSCCAG00000023031	RBFOX1	100	97.129	ENSODEG00000013166	RBFOX1	100	97.129	Octodon_degus
ENSCCAG00000023031	RBFOX1	98	90.270	ENSOANG00000002379	RBFOX1	98	95.405	Ornithorhynchus_anatinus
ENSCCAG00000023031	RBFOX1	58	96.789	ENSOCUG00000001205	-	100	94.667	Oryctolagus_cuniculus
ENSCCAG00000023031	RBFOX1	94	96.931	ENSOGAG00000025535	RBFOX1	98	96.931	Otolemur_garnettii
ENSCCAG00000023031	RBFOX1	64	93.074	ENSOARG00000005135	RBFOX1	99	93.074	Ovis_aries
ENSCCAG00000023031	RBFOX1	100	99.766	ENSPPAG00000036238	-	100	99.446	Pan_paniscus
ENSCCAG00000023031	RBFOX1	99	99.164	ENSPPRG00000006546	RBFOX1	100	98.133	Panthera_pardus
ENSCCAG00000023031	RBFOX1	96	84.824	ENSPTIG00000021154	RBFOX1	99	84.469	Panthera_tigris_altaica
ENSCCAG00000023031	RBFOX1	100	99.766	ENSPTRG00000007744	RBFOX1	100	99.522	Pan_troglodytes
ENSCCAG00000023031	RBFOX1	100	99.766	ENSPANG00000026500	RBFOX1	100	99.522	Papio_anubis
ENSCCAG00000023031	RBFOX1	71	92.481	ENSPKIG00000019353	rbfox1	86	92.075	Paramormyrops_kingsleyae
ENSCCAG00000023031	RBFOX1	97	88.767	ENSPKIG00000009667	-	95	90.323	Paramormyrops_kingsleyae
ENSCCAG00000023031	RBFOX1	93	92.821	ENSPSIG00000006523	RBFOX1	97	92.821	Pelodiscus_sinensis
ENSCCAG00000023031	RBFOX1	100	97.368	ENSPEMG00000017607	Rbfox1	100	97.368	Peromyscus_maniculatus_bairdii
ENSCCAG00000023031	RBFOX1	74	90.823	ENSPCIG00000026887	RBFOX1	100	91.126	Phascolarctos_cinereus
ENSCCAG00000023031	RBFOX1	97	94.005	ENSPPYG00000007079	-	93	99.183	Pongo_abelii
ENSCCAG00000023031	RBFOX1	90	89.153	ENSPCAG00000002630	RBFOX1	100	89.153	Procavia_capensis
ENSCCAG00000023031	RBFOX1	100	99.766	ENSPCOG00000025687	RBFOX1	100	99.043	Propithecus_coquereli
ENSCCAG00000023031	RBFOX1	100	94.019	ENSPVAG00000013467	RBFOX1	100	94.019	Pteropus_vampyrus
ENSCCAG00000023031	RBFOX1	93	87.838	ENSPNAG00000023109	rbfox1	100	87.838	Pygocentrus_nattereri
ENSCCAG00000023031	RBFOX1	100	94.737	ENSRNOG00000002827	Rbfox1	100	94.737	Rattus_norvegicus
ENSCCAG00000023031	RBFOX1	97	99.758	ENSRBIG00000044478	RBFOX1	100	99.758	Rhinopithecus_bieti
ENSCCAG00000023031	RBFOX1	100	99.766	ENSRROG00000044411	RBFOX1	100	99.522	Rhinopithecus_roxellana
ENSCCAG00000023031	RBFOX1	100	99.766	ENSSBOG00000033726	RBFOX1	100	99.467	Saimiri_boliviensis_boliviensis
ENSCCAG00000023031	RBFOX1	97	89.487	ENSSHAG00000009257	RBFOX1	98	90.793	Sarcophilus_harrisii
ENSCCAG00000023031	RBFOX1	89	74.052	ENSSFOG00015009955	-	87	74.052	Scleropages_formosus
ENSCCAG00000023031	RBFOX1	97	77.072	ENSSFOG00015023675	rbfox1	97	86.667	Scleropages_formosus
ENSCCAG00000023031	RBFOX1	97	82.940	ENSSMAG00000015505	rbfox1	93	82.677	Scophthalmus_maximus
ENSCCAG00000023031	RBFOX1	97	80.163	ENSSDUG00000016413	rbfox1	99	80.274	Seriola_dumerili
ENSCCAG00000023031	RBFOX1	83	79.233	ENSSLDG00000009353	rbfox1	95	78.477	Seriola_lalandi_dorsalis
ENSCCAG00000023031	RBFOX1	83	89.776	ENSSPUG00000009732	RBFOX1	87	89.776	Sphenodon_punctatus
ENSCCAG00000023031	RBFOX1	100	78.571	ENSSPAG00000009723	rbfox1	100	81.530	Stegastes_partitus
ENSCCAG00000023031	RBFOX1	97	98.025	ENSSSCG00000007917	RBFOX1	100	99.153	Sus_scrofa
ENSCCAG00000023031	RBFOX1	93	92.821	ENSTGUG00000004562	RBFOX1	100	92.821	Taeniopygia_guttata
ENSCCAG00000023031	RBFOX1	97	81.266	ENSTRUG00000020940	rbfox1	99	81.530	Takifugu_rubripes
ENSCCAG00000023031	RBFOX1	64	63.066	ENSTNIG00000002567	rbfox1	100	64.808	Tetraodon_nigroviridis
ENSCCAG00000023031	RBFOX1	81	89.655	ENSTBEG00000009169	-	81	89.655	Tupaia_belangeri
ENSCCAG00000023031	RBFOX1	100	98.086	ENSTTRG00000005700	RBFOX1	100	98.086	Tursiops_truncatus
ENSCCAG00000023031	RBFOX1	97	95.181	ENSUAMG00000024633	RBFOX1	97	94.010	Ursus_americanus
ENSCCAG00000023031	RBFOX1	95	81.967	ENSUMAG00000003579	RBFOX1	97	84.896	Ursus_maritimus
ENSCCAG00000023031	RBFOX1	81	99.026	ENSVPAG00000001284	RBFOX1	81	99.026	Vicugna_pacos
ENSCCAG00000023031	RBFOX1	97	98.077	ENSVVUG00000017311	RBFOX1	98	98.108	Vulpes_vulpes