EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000023069 (Gene tree)
Gene ID: 108287589
Gene Symbol: BLM
Alias: BS|RECQ2|RECQL3
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 96815 bases
Position: chrKV389774.1:321780-418594
Accession: 108287589
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000010639	HRDC	PF00570.23	8.5e-12	1	1
ENSCCAP00000010650	BDHCT	PF08072.11	2e-18	1	1
ENSCCAP00000010639	BDHCT	PF08072.11	2.3e-18	1	1
ENSCCAP00000010639	DEAD	PF00270.29	1.9e-19	1	1
ENSCCAP00000010650	DEAD	PF00270.29	1.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000028046	BLM-202	3813	-	ENSCCAP00000010650	1270 (aa)	-	A0A2K5Q438
ENSCCAT00000028035	BLM-201	7337	XM_017506102	ENSCCAP00000010639	1401 (aa)	XP_017361591	A0A2K5Q465

Gene Model

Click here to download ENSCCAG00000023069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000023069's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000023069	BLM	100	91.320	ENSG00000197299	BLM	100	91.602	Homo_sapiens
ENSCCAG00000023069	BLM	51	73.566	ENSAPOG00000017966	blm	58	64.885	Acanthochromis_polyacanthus
ENSCCAG00000023069	BLM	100	81.767	ENSAMEG00000013843	BLM	100	81.625	Ailuropoda_melanoleuca
ENSCCAG00000023069	BLM	51	74.227	ENSACIG00000023762	blm	56	65.301	Amphilophus_citrinellus
ENSCCAG00000023069	BLM	55	73.156	ENSAOCG00000003318	blm	57	65.438	Amphiprion_ocellaris
ENSCCAG00000023069	BLM	51	72.951	ENSAPEG00000018105	blm	56	65.184	Amphiprion_percula
ENSCCAG00000023069	BLM	82	74.180	ENSATEG00000006421	blm	61	66.033	Anabas_testudineus
ENSCCAG00000023069	BLM	81	58.118	ENSAPLG00000006878	BLM	80	69.067	Anas_platyrhynchos
ENSCCAG00000023069	BLM	100	95.480	ENSANAG00000038415	BLM	100	95.480	Aotus_nancymaae
ENSCCAG00000023069	BLM	86	69.669	ENSACLG00000020354	blm	59	62.959	Astatotilapia_calliptera
ENSCCAG00000023069	BLM	93	81.250	ENSBTAG00000020301	BLM	100	81.728	Bos_taurus
ENSCCAG00000023069	BLM	100	94.774	ENSCJAG00000009803	BLM	100	94.774	Callithrix_jacchus
ENSCCAG00000023069	BLM	100	81.713	ENSCAFG00000012385	BLM	100	81.625	Canis_familiaris
ENSCCAG00000023069	BLM	100	81.534	ENSCAFG00020016111	BLM	94	91.655	Canis_lupus_dingo
ENSCCAG00000023069	BLM	100	80.367	ENSCHIG00000010329	BLM	100	80.085	Capra_hircus
ENSCCAG00000023069	BLM	100	85.130	ENSTSYG00000012368	BLM	100	85.060	Carlito_syrichta
ENSCCAG00000023069	BLM	86	85.612	ENSCAPG00000017976	BLM	99	85.612	Cavia_aperea
ENSCCAG00000023069	BLM	100	77.237	ENSCPOG00000001761	BLM	100	77.237	Cavia_porcellus
ENSCCAG00000023069	BLM	100	91.993	ENSCATG00000040609	BLM	100	92.025	Cercocebus_atys
ENSCCAG00000023069	BLM	100	78.169	ENSCLAG00000012111	BLM	100	78.099	Chinchilla_lanigera
ENSCCAG00000023069	BLM	100	91.343	ENSCSAG00000017040	BLM	100	91.298	Chlorocebus_sabaeus
ENSCCAG00000023069	BLM	86	94.574	ENSCHOG00000006255	BLM	80	94.574	Choloepus_hoffmanni
ENSCCAG00000023069	BLM	89	55.130	ENSCPBG00000025000	BLM	97	74.064	Chrysemys_picta_bellii
ENSCCAG00000023069	BLM	88	82.320	ENSCANG00000034808	BLM	100	82.960	Colobus_angolensis_palliatus
ENSCCAG00000023069	BLM	100	77.692	ENSCGRG00001024897	Blm	100	77.199	Cricetulus_griseus_chok1gshd
ENSCCAG00000023069	BLM	74	72.651	ENSCGRG00000016261	Blm	97	73.069	Cricetulus_griseus_crigri
ENSCCAG00000023069	BLM	89	48.760	ENSCSEG00000013483	blm	80	53.647	Cynoglossus_semilaevis
ENSCCAG00000023069	BLM	82	74.180	ENSDARG00000077089	blm	83	66.498	Danio_rerio
ENSCCAG00000023069	BLM	99	79.944	ENSDNOG00000010159	BLM	99	80.084	Dasypus_novemcinctus
ENSCCAG00000023069	BLM	74	80.574	ENSDORG00000011033	Blm	100	80.861	Dipodomys_ordii
ENSCCAG00000023069	BLM	52	41.099	FBgn0002906	Blm	51	40.485	Drosophila_melanogaster
ENSCCAG00000023069	BLM	84	84.874	ENSETEG00000015019	BLM	77	84.874	Echinops_telfairi
ENSCCAG00000023069	BLM	100	80.297	ENSEASG00005006727	BLM	100	80.353	Equus_asinus_asinus
ENSCCAG00000023069	BLM	100	82.394	ENSECAG00000011405	BLM	100	82.353	Equus_caballus
ENSCCAG00000023069	BLM	98	74.257	ENSEEUG00000001434	BLM	98	73.967	Erinaceus_europaeus
ENSCCAG00000023069	BLM	82	75.410	ENSELUG00000019098	blm	59	66.329	Esox_lucius
ENSCCAG00000023069	BLM	100	79.817	ENSFCAG00000006087	BLM	100	79.746	Felis_catus
ENSCCAG00000023069	BLM	89	52.184	ENSFALG00000010981	BLM	89	56.125	Ficedula_albicollis
ENSCCAG00000023069	BLM	93	92.405	ENSFDAG00000012658	BLM	98	85.660	Fukomys_damarensis
ENSCCAG00000023069	BLM	57	66.197	ENSFHEG00000002553	blm	57	64.758	Fundulus_heteroclitus
ENSCCAG00000023069	BLM	99	45.017	ENSGMOG00000016431	blm	89	61.196	Gadus_morhua
ENSCCAG00000023069	BLM	99	50.639	ENSGALG00000008256	BLM	85	68.937	Gallus_gallus
ENSCCAG00000023069	BLM	55	73.566	ENSGAFG00000001117	blm	63	65.301	Gambusia_affinis
ENSCCAG00000023069	BLM	56	73.566	ENSGACG00000010863	blm	100	73.535	Gasterosteus_aculeatus
ENSCCAG00000023069	BLM	88	52.331	ENSGAGG00000005383	BLM	97	61.824	Gopherus_agassizii
ENSCCAG00000023069	BLM	100	91.108	ENSGGOG00000007710	BLM	100	91.390	Gorilla_gorilla
ENSCCAG00000023069	BLM	87	69.669	ENSHBUG00000015943	blm	60	63.077	Haplochromis_burtoni
ENSCCAG00000023069	BLM	100	80.070	ENSHGLG00000013231	BLM	99	80.000	Heterocephalus_glaber_female
ENSCCAG00000023069	BLM	74	55.153	ENSHCOG00000011455	blm	99	54.406	Hippocampus_comes
ENSCCAG00000023069	BLM	74	55.661	ENSIPUG00000000529	blm	68	66.327	Ictalurus_punctatus
ENSCCAG00000023069	BLM	100	80.868	ENSSTOG00000005000	BLM	100	81.013	Ictidomys_tridecemlineatus
ENSCCAG00000023069	BLM	66	85.918	ENSJJAG00000016322	Blm	94	87.184	Jaculus_jaculus
ENSCCAG00000023069	BLM	83	52.526	ENSKMAG00000016608	blm	54	69.118	Kryptolebias_marmoratus
ENSCCAG00000023069	BLM	99	50.815	ENSLACG00000006490	BLM	58	67.925	Latimeria_chalumnae
ENSCCAG00000023069	BLM	99	46.871	ENSLOCG00000014302	blm	66	62.471	Lepisosteus_oculatus
ENSCCAG00000023069	BLM	100	92.171	ENSMFAG00000042982	BLM	100	92.171	Macaca_fascicularis
ENSCCAG00000023069	BLM	100	92.171	ENSMMUG00000019526	BLM	100	92.171	Macaca_mulatta
ENSCCAG00000023069	BLM	99	88.248	ENSMNEG00000031251	BLM	92	98.113	Macaca_nemestrina
ENSCCAG00000023069	BLM	100	89.414	ENSMLEG00000032934	BLM	100	89.697	Mandrillus_leucophaeus
ENSCCAG00000023069	BLM	70	68.617	ENSMAMG00000008726	blm	65	63.466	Mastacembelus_armatus
ENSCCAG00000023069	BLM	87	69.485	ENSMZEG00005022323	blm	64	62.976	Maylandia_zebra
ENSCCAG00000023069	BLM	100	77.723	ENSMAUG00000008953	Blm	99	77.020	Mesocricetus_auratus
ENSCCAG00000023069	BLM	100	84.648	ENSMICG00000034442	BLM	100	84.507	Microcebus_murinus
ENSCCAG00000023069	BLM	100	76.056	ENSMOCG00000016367	Blm	99	74.912	Microtus_ochrogaster
ENSCCAG00000023069	BLM	56	67.446	ENSMMOG00000006959	blm	60	61.792	Mola_mola
ENSCCAG00000023069	BLM	99	63.549	ENSMODG00000019449	BLM	99	63.549	Monodelphis_domestica
ENSCCAG00000023069	BLM	75	63.337	ENSMALG00000007323	blm	64	63.294	Monopterus_albus
ENSCCAG00000023069	BLM	100	73.840	MGP_CAROLIEiJ_G0029907	Blm	100	73.418	Mus_caroli
ENSCCAG00000023069	BLM	100	74.318	ENSMUSG00000030528	Blm	100	73.828	Mus_musculus
ENSCCAG00000023069	BLM	100	74.895	MGP_PahariEiJ_G0013129	Blm	100	73.629	Mus_pahari
ENSCCAG00000023069	BLM	100	74.526	MGP_SPRETEiJ_G0031009	Blm	100	73.684	Mus_spretus
ENSCCAG00000023069	BLM	87	79.701	ENSMPUG00000015657	BLM	99	80.415	Mustela_putorius_furo
ENSCCAG00000023069	BLM	100	78.438	ENSMLUG00000014697	BLM	100	78.551	Myotis_lucifugus
ENSCCAG00000023069	BLM	100	78.632	ENSNGAG00000001275	Blm	100	78.843	Nannospalax_galili
ENSCCAG00000023069	BLM	82	75.258	ENSNBRG00000019702	blm	61	66.069	Neolamprologus_brichardi
ENSCCAG00000023069	BLM	100	90.120	ENSNLEG00000012087	BLM	100	90.402	Nomascus_leucogenys
ENSCCAG00000023069	BLM	99	60.322	ENSMEUG00000007253	BLM	99	60.602	Notamacropus_eugenii
ENSCCAG00000023069	BLM	95	93.981	ENSOPRG00000011667	BLM	95	86.288	Ochotona_princeps
ENSCCAG00000023069	BLM	74	78.311	ENSODEG00000015373	BLM	100	78.311	Octodon_degus
ENSCCAG00000023069	BLM	56	69.541	ENSONIG00000015193	blm	74	53.989	Oreochromis_niloticus
ENSCCAG00000023069	BLM	50	90.000	ENSOANG00000009316	-	99	82.422	Ornithorhynchus_anatinus
ENSCCAG00000023069	BLM	99	74.048	ENSOCUG00000013969	BLM	99	74.048	Oryctolagus_cuniculus
ENSCCAG00000023069	BLM	65	73.770	ENSORLG00000008110	blm	60	66.496	Oryzias_latipes
ENSCCAG00000023069	BLM	60	73.975	ENSORLG00020004812	blm	57	66.496	Oryzias_latipes_hni
ENSCCAG00000023069	BLM	60	74.180	ENSORLG00015018640	blm	78	66.325	Oryzias_latipes_hsok
ENSCCAG00000023069	BLM	62	73.361	ENSOMEG00000023545	blm	57	65.645	Oryzias_melastigma
ENSCCAG00000023069	BLM	100	79.237	ENSOGAG00000005708	BLM	100	77.183	Otolemur_garnettii
ENSCCAG00000023069	BLM	100	79.566	ENSOARG00000012875	BLM	100	79.496	Ovis_aries
ENSCCAG00000023069	BLM	100	91.461	ENSPPAG00000032173	BLM	100	91.743	Pan_paniscus
ENSCCAG00000023069	BLM	100	79.887	ENSPPRG00000002471	BLM	100	79.817	Panthera_pardus
ENSCCAG00000023069	BLM	100	79.485	ENSPTIG00000016168	BLM	100	79.362	Panthera_tigris_altaica
ENSCCAG00000023069	BLM	100	91.281	ENSPTRG00000007460	BLM	100	91.281	Pan_troglodytes
ENSCCAG00000023069	BLM	100	92.438	ENSPANG00000018572	BLM	100	92.438	Papio_anubis
ENSCCAG00000023069	BLM	87	69.358	ENSPKIG00000008954	blm	65	63.948	Paramormyrops_kingsleyae
ENSCCAG00000023069	BLM	52	66.667	ENSPMGG00000006629	blm	81	66.803	Periophthalmus_magnuspinnatus
ENSCCAG00000023069	BLM	100	76.636	ENSPEMG00000017348	Blm	100	76.214	Peromyscus_maniculatus_bairdii
ENSCCAG00000023069	BLM	51	59.441	ENSPMAG00000000445	blm	96	59.720	Petromyzon_marinus
ENSCCAG00000023069	BLM	99	62.347	ENSPCIG00000006609	BLM	99	62.619	Phascolarctos_cinereus
ENSCCAG00000023069	BLM	57	73.279	ENSPFOG00000005059	blm	60	65.140	Poecilia_formosa
ENSCCAG00000023069	BLM	55	73.770	ENSPLAG00000017344	blm	60	65.128	Poecilia_latipinna
ENSCCAG00000023069	BLM	56	73.566	ENSPMEG00000000321	blm	60	65.385	Poecilia_mexicana
ENSCCAG00000023069	BLM	55	73.361	ENSPREG00000007715	blm	78	54.167	Poecilia_reticulata
ENSCCAG00000023069	BLM	100	89.273	ENSPPYG00000006784	BLM	100	89.485	Pongo_abelii
ENSCCAG00000023069	BLM	73	93.939	ENSPCAG00000008960	BLM	73	93.939	Procavia_capensis
ENSCCAG00000023069	BLM	100	80.423	ENSPCOG00000000439	BLM	100	79.831	Propithecus_coquereli
ENSCCAG00000023069	BLM	81	95.208	ENSPVAG00000011642	BLM	83	95.208	Pteropus_vampyrus
ENSCCAG00000023069	BLM	60	51.429	ENSPNYG00000010956	blm	57	51.834	Pundamilia_nyererei
ENSCCAG00000023069	BLM	55	71.111	ENSPNAG00000011714	blm	59	65.485	Pygocentrus_nattereri
ENSCCAG00000023069	BLM	100	73.784	ENSRNOG00000011213	Blm	100	73.221	Rattus_norvegicus
ENSCCAG00000023069	BLM	100	89.061	ENSRBIG00000029656	BLM	100	93.378	Rhinopithecus_bieti
ENSCCAG00000023069	BLM	100	91.249	ENSRROG00000037871	BLM	100	91.108	Rhinopithecus_roxellana
ENSCCAG00000023069	BLM	100	95.639	ENSSBOG00000030957	BLM	100	95.639	Saimiri_boliviensis_boliviensis
ENSCCAG00000023069	BLM	99	63.257	ENSSHAG00000007988	BLM	99	63.814	Sarcophilus_harrisii
ENSCCAG00000023069	BLM	55	68.727	ENSSFOG00015015462	blm	67	62.048	Scleropages_formosus
ENSCCAG00000023069	BLM	83	51.025	ENSSDUG00000010955	blm	84	50.697	Seriola_dumerili
ENSCCAG00000023069	BLM	82	52.290	ENSSLDG00000000634	blm	99	46.180	Seriola_lalandi_dorsalis
ENSCCAG00000023069	BLM	94	69.864	ENSSARG00000006398	BLM	99	69.940	Sorex_araneus
ENSCCAG00000023069	BLM	79	57.843	ENSSPUG00000000013	BLM	93	58.863	Sphenodon_punctatus
ENSCCAG00000023069	BLM	51	73.156	ENSSPAG00000013999	blm	55	65.900	Stegastes_partitus
ENSCCAG00000023069	BLM	100	81.386	ENSSSCG00000001816	BLM	99	81.692	Sus_scrofa
ENSCCAG00000023069	BLM	77	55.763	ENSTGUG00000009959	-	99	51.680	Taeniopygia_guttata
ENSCCAG00000023069	BLM	79	51.426	ENSTRUG00000019860	blm	80	51.394	Takifugu_rubripes
ENSCCAG00000023069	BLM	84	51.842	ENSTNIG00000019246	blm	63	64.204	Tetraodon_nigroviridis
ENSCCAG00000023069	BLM	77	90.043	ENSTBEG00000006706	BLM	81	82.987	Tupaia_belangeri
ENSCCAG00000023069	BLM	100	82.839	ENSTTRG00000016386	BLM	100	82.768	Tursiops_truncatus
ENSCCAG00000023069	BLM	100	81.651	ENSUMAG00000009105	BLM	97	92.476	Ursus_maritimus
ENSCCAG00000023069	BLM	100	79.408	ENSVPAG00000000085	BLM	100	79.408	Vicugna_pacos
ENSCCAG00000023069	BLM	95	94.470	ENSVVUG00000006402	BLM	100	89.148	Vulpes_vulpes
ENSCCAG00000023069	BLM	99	50.779	ENSXETG00000007847	blm	87	72.423	Xenopus_tropicalis
ENSCCAG00000023069	BLM	51	67.828	ENSXCOG00000020227	blm	74	50.507	Xiphophorus_couchianus
ENSCCAG00000023069	BLM	51	72.951	ENSXMAG00000002951	blm	76	52.811	Xiphophorus_maculatus