EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000023116 (Gene tree)
Gene ID: 108292882
Gene Symbol: FAM172A
Alias: C5orf21|DKFZP564D172|Toupee
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 505438 bases
Position: chrKV389937.1:30157-535594
Accession: 108292882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000010791	Arb2	PF09757.9	2e-09	1	1
ENSCCAP00000010771	Arb2	PF09757.9	3.2e-09	1	1
ENSCCAP00000010781	Arb2	PF09757.9	5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000028168	FAM172A-201	1766	XM_017514011	ENSCCAP00000010771	370 (aa)	XP_017369500	A0A2K5Q4E8
ENSCCAT00000028188	FAM172A-204	885	-	ENSCCAP00000010791	294 (aa)	-	A0A2K5Q4G7
ENSCCAT00000028181	FAM172A-203	921	-	ENSCCAP00000010784	306 (aa)	-	A0A2K5Q4L0
ENSCCAT00000028178	FAM172A-202	1251	XM_017514006	ENSCCAP00000010781	416 (aa)	XP_017369495	A0A2K5Q4F7

Gene Model

Click here to download ENSCCAG00000023116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000023116's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000023116	FAM172A	100	98.558	ENSG00000113391	FAM172A	100	98.734	Homo_sapiens
ENSCCAG00000023116	FAM172A	100	87.568	ENSAPLG00000004055	FAM172A	97	87.624	Anas_platyrhynchos
ENSCCAG00000023116	FAM172A	64	42.105	ENSAPLG00000011555	-	97	39.394	Anas_platyrhynchos
ENSCCAG00000023116	FAM172A	92	87.823	ENSACAG00000013305	FAM172A	95	88.798	Anolis_carolinensis
ENSCCAG00000023116	FAM172A	93	98.901	ENSANAG00000035869	FAM172A	93	100.000	Aotus_nancymaae
ENSCCAG00000023116	FAM172A	100	97.356	ENSBTAG00000050195	FAM172A	100	97.356	Bos_taurus
ENSCCAG00000023116	FAM172A	100	99.519	ENSCJAG00000010444	FAM172A	100	99.519	Callithrix_jacchus
ENSCCAG00000023116	FAM172A	92	97.778	ENSCAFG00000008064	FAM172A	99	98.649	Canis_familiaris
ENSCCAG00000023116	FAM172A	100	97.356	ENSCAFG00020006210	FAM172A	100	97.356	Canis_lupus_dingo
ENSCCAG00000023116	FAM172A	100	97.115	ENSCHIG00000008440	FAM172A	100	97.115	Capra_hircus
ENSCCAG00000023116	FAM172A	90	97.368	ENSTSYG00000006286	FAM172A	85	97.368	Carlito_syrichta
ENSCCAG00000023116	FAM172A	61	85.841	ENSCAPG00000014103	-	100	85.841	Cavia_aperea
ENSCCAG00000023116	FAM172A	100	87.981	ENSCLAG00000005472	FAM172A	100	98.734	Chinchilla_lanigera
ENSCCAG00000023116	FAM172A	97	43.902	ENSCPBG00000004402	-	96	43.902	Chrysemys_picta_bellii
ENSCCAG00000023116	FAM172A	99	97.952	ENSCANG00000040412	FAM172A	99	97.952	Colobus_angolensis_palliatus
ENSCCAG00000023116	FAM172A	100	97.596	ENSDNOG00000004689	FAM172A	100	97.596	Dasypus_novemcinctus
ENSCCAG00000023116	FAM172A	99	95.862	ENSDORG00000013558	Fam172a	95	95.862	Dipodomys_ordii
ENSCCAG00000023116	FAM172A	92	40.000	ENSEBUG00000016097	-	62	40.000	Eptatretus_burgeri
ENSCCAG00000023116	FAM172A	100	94.865	ENSECAG00000018274	FAM172A	98	96.206	Equus_caballus
ENSCCAG00000023116	FAM172A	92	95.185	ENSEEUG00000002887	FAM172A	100	84.856	Erinaceus_europaeus
ENSCCAG00000023116	FAM172A	99	68.901	ENSELUG00000017647	fam172a	96	69.287	Esox_lucius
ENSCCAG00000023116	FAM172A	100	97.838	ENSFCAG00000025443	FAM172A	100	97.837	Felis_catus
ENSCCAG00000023116	FAM172A	92	86.667	ENSFALG00000009072	FAM172A	95	89.577	Ficedula_albicollis
ENSCCAG00000023116	FAM172A	96	43.733	ENSFALG00000006501	-	100	43.733	Ficedula_albicollis
ENSCCAG00000023116	FAM172A	100	88.919	ENSGALG00000014661	FAM172A	97	88.614	Gallus_gallus
ENSCCAG00000023116	FAM172A	94	45.326	ENSGAGG00000022828	-	93	45.326	Gopherus_agassizii
ENSCCAG00000023116	FAM172A	100	90.811	ENSGAGG00000003839	FAM172A	97	91.337	Gopherus_agassizii
ENSCCAG00000023116	FAM172A	100	98.317	ENSGGOG00000010296	FAM172A	100	98.317	Gorilla_gorilla
ENSCCAG00000023116	FAM172A	100	94.324	ENSHGLG00000011178	FAM172A	100	97.468	Heterocephalus_glaber_female
ENSCCAG00000023116	FAM172A	91	95.167	ENSHGLG00100013340	FAM172A	100	97.468	Heterocephalus_glaber_male
ENSCCAG00000023116	FAM172A	100	97.568	ENSSTOG00000009918	FAM172A	100	97.356	Ictidomys_tridecemlineatus
ENSCCAG00000023116	FAM172A	98	48.219	ENSLACG00000001532	si:ch73-41e3.7	100	47.480	Latimeria_chalumnae
ENSCCAG00000023116	FAM172A	100	75.603	ENSLOCG00000001629	fam172a	97	76.790	Lepisosteus_oculatus
ENSCCAG00000023116	FAM172A	99	97.611	ENSMFAG00000001171	FAM172A	99	97.611	Macaca_fascicularis
ENSCCAG00000023116	FAM172A	100	98.378	ENSMNEG00000039938	FAM172A	99	97.611	Macaca_nemestrina
ENSCCAG00000023116	FAM172A	100	98.649	ENSMICG00000030403	FAM172A	100	98.558	Microcebus_murinus
ENSCCAG00000023116	FAM172A	100	94.054	ENSMOCG00000003613	Fam172a	100	94.054	Microtus_ochrogaster
ENSCCAG00000023116	FAM172A	100	90.270	ENSMODG00000020131	FAM172A	97	90.594	Monodelphis_domestica
ENSCCAG00000023116	FAM172A	100	65.405	MGP_PahariEiJ_G0015818	Fam172a	100	65.405	Mus_pahari
ENSCCAG00000023116	FAM172A	100	97.027	ENSNGAG00000019570	Fam172a	100	97.027	Nannospalax_galili
ENSCCAG00000023116	FAM172A	98	98.264	ENSNLEG00000013903	FAM172A	94	98.264	Nomascus_leucogenys
ENSCCAG00000023116	FAM172A	93	89.338	ENSOANG00000011068	FAM172A	95	91.292	Ornithorhynchus_anatinus
ENSCCAG00000023116	FAM172A	97	98.329	ENSOCUG00000007299	FAM172A	96	98.025	Oryctolagus_cuniculus
ENSCCAG00000023116	FAM172A	100	96.394	ENSOGAG00000015189	FAM172A	100	96.394	Otolemur_garnettii
ENSCCAG00000023116	FAM172A	91	96.654	ENSOARG00000016711	FAM172A	85	94.624	Ovis_aries
ENSCCAG00000023116	FAM172A	99	98.294	ENSPPAG00000030542	FAM172A	99	98.294	Pan_paniscus
ENSCCAG00000023116	FAM172A	100	97.838	ENSPPRG00000006653	FAM172A	100	97.837	Panthera_pardus
ENSCCAG00000023116	FAM172A	100	97.838	ENSPTIG00000012681	FAM172A	100	97.837	Panthera_tigris_altaica
ENSCCAG00000023116	FAM172A	99	98.294	ENSPTRG00000017074	FAM172A	99	98.294	Pan_troglodytes
ENSCCAG00000023116	FAM172A	99	97.611	ENSPANG00000011687	FAM172A	99	97.611	Papio_anubis
ENSCCAG00000023116	FAM172A	97	74.722	ENSPKIG00000012314	fam172a	96	83.516	Paramormyrops_kingsleyae
ENSCCAG00000023116	FAM172A	100	94.865	ENSPEMG00000009604	-	100	98.734	Peromyscus_maniculatus_bairdii
ENSCCAG00000023116	FAM172A	100	90.270	ENSPCIG00000028612	FAM172A	97	90.594	Phascolarctos_cinereus
ENSCCAG00000023116	FAM172A	62	99.448	ENSPCOG00000024072	FAM172A	93	97.817	Propithecus_coquereli
ENSCCAG00000023116	FAM172A	92	94.096	ENSRNOG00000013844	Fam172a	100	94.096	Rattus_norvegicus
ENSCCAG00000023116	FAM172A	60	93.785	ENSRBIG00000028680	-	79	93.785	Rhinopithecus_bieti
ENSCCAG00000023116	FAM172A	99	97.952	ENSRROG00000023807	FAM172A	99	97.952	Rhinopithecus_roxellana
ENSCCAG00000023116	FAM172A	100	99.279	ENSSBOG00000019860	FAM172A	100	99.279	Saimiri_boliviensis_boliviensis
ENSCCAG00000023116	FAM172A	100	89.730	ENSSHAG00000013743	FAM172A	97	90.099	Sarcophilus_harrisii
ENSCCAG00000023116	FAM172A	100	88.378	ENSSPUG00000008161	FAM172A	97	88.861	Sphenodon_punctatus
ENSCCAG00000023116	FAM172A	100	98.108	ENSSSCG00000027608	FAM172A	100	98.108	Sus_scrofa
ENSCCAG00000023116	FAM172A	100	86.757	ENSTGUG00000000715	FAM172A	100	87.105	Taeniopygia_guttata
ENSCCAG00000023116	FAM172A	92	46.182	ENSTGUG00000013623	-	100	46.726	Taeniopygia_guttata
ENSCCAG00000023116	FAM172A	81	55.263	ENSTNIG00000009902	fam172a	99	59.036	Tetraodon_nigroviridis
ENSCCAG00000023116	FAM172A	100	94.595	ENSTTRG00000001521	FAM172A	97	94.321	Tursiops_truncatus
ENSCCAG00000023116	FAM172A	100	98.378	ENSUMAG00000005442	FAM172A	100	98.317	Ursus_maritimus
ENSCCAG00000023116	FAM172A	100	97.356	ENSVVUG00000022112	FAM172A	100	97.356	Vulpes_vulpes
ENSCCAG00000023116	FAM172A	97	43.716	ENSXETG00000033027	-	99	42.969	Xenopus_tropicalis
ENSCCAG00000023116	FAM172A	100	80.863	ENSXETG00000011592	fam172a	96	81.281	Xenopus_tropicalis