EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000023170 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 892 bases
Position: chrKV389963.1:627391-628282
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000010836	RRM_1	PF00076.22	5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000028234	-	645	-	ENSCCAP00000010836	214 (aa)	-	A0A2K5Q4K8

Gene Model

Click here to download ENSCCAG00000023170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000023170's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000023170	-	77	40.964	ENSCCAG00000025003	RALYL	50	68.627
ENSCCAG00000023170	-	80	58.986	ENSCCAG00000020533	-	84	56.855
ENSCCAG00000023170	-	100	53.020	ENSCCAG00000025125	-	92	54.730
ENSCCAG00000023170	-	80	60.396	ENSCCAG00000014874	-	88	60.396
ENSCCAG00000023170	-	100	60.837	ENSCCAG00000029854	-	91	64.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000023170	-	100	56.716	ENSG00000179412	HNRNPCL4	91	54.851	Homo_sapiens
ENSCCAG00000023170	-	100	71.053	ENSG00000092199	HNRNPC	80	87.129	Homo_sapiens
ENSCCAG00000023170	-	100	55.597	ENSG00000275774	HNRNPCL2	91	55.597	Homo_sapiens
ENSCCAG00000023170	-	100	56.716	ENSG00000277058	HNRNPCL3	91	54.851	Homo_sapiens
ENSCCAG00000023170	-	100	59.701	ENSG00000179172	HNRNPCL1	91	57.836	Homo_sapiens
ENSCCAG00000023170	-	93	52.518	ENSAMEG00000006492	HNRNPC	80	56.000	Ailuropoda_melanoleuca
ENSCCAG00000023170	-	100	53.571	ENSACAG00000029093	-	89	57.762	Anolis_carolinensis
ENSCCAG00000023170	-	100	56.118	ENSANAG00000018389	-	93	57.085	Aotus_nancymaae
ENSCCAG00000023170	-	100	56.835	ENSANAG00000038269	-	92	58.696	Aotus_nancymaae
ENSCCAG00000023170	-	88	54.733	ENSANAG00000029835	-	78	57.604	Aotus_nancymaae
ENSCCAG00000023170	-	86	54.054	ENSANAG00000034055	-	52	74.359	Aotus_nancymaae
ENSCCAG00000023170	-	92	53.937	ENSANAG00000037534	-	58	82.051	Aotus_nancymaae
ENSCCAG00000023170	-	98	60.000	ENSANAG00000034906	HNRNPC	91	61.961	Aotus_nancymaae
ENSCCAG00000023170	-	97	62.055	ENSANAG00000031628	-	88	64.822	Aotus_nancymaae
ENSCCAG00000023170	-	86	57.563	ENSANAG00000027016	-	80	59.259	Aotus_nancymaae
ENSCCAG00000023170	-	86	52.301	ENSANAG00000025823	-	69	51.613	Aotus_nancymaae
ENSCCAG00000023170	-	100	59.191	ENSBTAG00000011396	HNRNPC	91	63.941	Bos_taurus
ENSCCAG00000023170	-	98	57.706	ENSCJAG00000023213	-	85	59.058	Callithrix_jacchus
ENSCCAG00000023170	-	80	59.447	ENSCJAG00000003238	-	76	62.212	Callithrix_jacchus
ENSCCAG00000023170	-	100	56.338	ENSCJAG00000009354	HNRNPC	92	59.786	Callithrix_jacchus
ENSCCAG00000023170	-	80	58.716	ENSCJAG00000016319	-	75	61.468	Callithrix_jacchus
ENSCCAG00000023170	-	93	52.518	ENSCAFG00000005504	-	82	57.091	Canis_familiaris
ENSCCAG00000023170	-	100	58.088	ENSCAFG00000002619	-	91	60.967	Canis_familiaris
ENSCCAG00000023170	-	100	61.765	ENSCAFG00000018380	-	91	63.197	Canis_familiaris
ENSCCAG00000023170	-	100	54.615	ENSCAFG00020014469	HNRNPC	91	58.935	Canis_lupus_dingo
ENSCCAG00000023170	-	91	55.505	ENSCHIG00000015259	-	89	54.751	Capra_hircus
ENSCCAG00000023170	-	100	54.615	ENSCHIG00000022536	-	91	58.935	Capra_hircus
ENSCCAG00000023170	-	100	53.676	ENSCHIG00000026850	-	100	58.736	Capra_hircus
ENSCCAG00000023170	-	100	52.308	ENSTSYG00000027744	-	91	53.077	Carlito_syrichta
ENSCCAG00000023170	-	93	57.547	ENSTSYG00000034314	-	69	60.753	Carlito_syrichta
ENSCCAG00000023170	-	100	50.877	ENSTSYG00000003305	-	92	52.249	Carlito_syrichta
ENSCCAG00000023170	-	92	52.964	ENSTSYG00000026064	-	79	54.400	Carlito_syrichta
ENSCCAG00000023170	-	100	55.709	ENSCAPG00000008726	HNRNPC	92	59.233	Cavia_aperea
ENSCCAG00000023170	-	100	55.986	ENSCPOG00000001474	HNRNPC	92	59.929	Cavia_porcellus
ENSCCAG00000023170	-	99	60.755	ENSCATG00000031526	-	93	62.642	Cercocebus_atys
ENSCCAG00000023170	-	80	62.673	ENSCATG00000035936	-	76	61.751	Cercocebus_atys
ENSCCAG00000023170	-	95	53.435	ENSCATG00000030828	-	93	57.034	Cercocebus_atys
ENSCCAG00000023170	-	100	55.439	ENSCLAG00000000947	HNRNPC	92	60.284	Chinchilla_lanigera
ENSCCAG00000023170	-	100	59.041	ENSCSAG00000016585	HNRNPC	91	62.687	Chlorocebus_sabaeus
ENSCCAG00000023170	-	100	54.851	ENSCSAG00000000637	-	91	53.358	Chlorocebus_sabaeus
ENSCCAG00000023170	-	100	57.312	ENSCHOG00000010033	HNRNPC	91	58.893	Choloepus_hoffmanni
ENSCCAG00000023170	-	80	55.981	ENSCANG00000034732	-	80	58.852	Colobus_angolensis_palliatus
ENSCCAG00000023170	-	100	59.041	ENSCANG00000035615	HNRNPC	91	62.687	Colobus_angolensis_palliatus
ENSCCAG00000023170	-	90	47.773	ENSCANG00000031846	-	75	45.528	Colobus_angolensis_palliatus
ENSCCAG00000023170	-	99	55.000	ENSCANG00000037885	-	83	54.651	Colobus_angolensis_palliatus
ENSCCAG00000023170	-	80	60.638	ENSCGRG00001024282	-	79	59.896	Cricetulus_griseus_chok1gshd
ENSCCAG00000023170	-	100	52.362	ENSCGRG00001006054	-	89	53.600	Cricetulus_griseus_chok1gshd
ENSCCAG00000023170	-	100	54.110	ENSCGRG00001004415	Hnrnpc	92	61.592	Cricetulus_griseus_chok1gshd
ENSCCAG00000023170	-	100	55.439	ENSCGRG00000012098	Hnrnpc	92	63.121	Cricetulus_griseus_crigri
ENSCCAG00000023170	-	80	60.638	ENSCGRG00000009850	-	79	59.896	Cricetulus_griseus_crigri
ENSCCAG00000023170	-	100	56.140	ENSDNOG00000003161	-	92	60.993	Dasypus_novemcinctus
ENSCCAG00000023170	-	100	54.737	ENSDNOG00000040064	-	92	59.574	Dasypus_novemcinctus
ENSCCAG00000023170	-	100	56.554	ENSDNOG00000044551	-	91	56.180	Dasypus_novemcinctus
ENSCCAG00000023170	-	99	44.882	ENSDNOG00000043205	-	88	43.678	Dasypus_novemcinctus
ENSCCAG00000023170	-	100	49.442	ENSDORG00000012163	-	91	52.416	Dipodomys_ordii
ENSCCAG00000023170	-	100	56.140	ENSEASG00005010413	HNRNPC	92	60.993	Equus_asinus_asinus
ENSCCAG00000023170	-	100	56.140	ENSECAG00000017645	HNRNPC	92	60.993	Equus_caballus
ENSCCAG00000023170	-	98	57.348	ENSEEUG00000007472	HNRNPC	91	59.140	Erinaceus_europaeus
ENSCCAG00000023170	-	100	56.491	ENSFCAG00000014889	HNRNPC	92	60.993	Felis_catus
ENSCCAG00000023170	-	98	60.236	ENSFDAG00000010728	-	90	61.811	Fukomys_damarensis
ENSCCAG00000023170	-	100	55.439	ENSFDAG00000003406	-	92	60.284	Fukomys_damarensis
ENSCCAG00000023170	-	100	59.041	ENSGGOG00000023015	HNRNPC	91	62.687	Gorilla_gorilla
ENSCCAG00000023170	-	100	49.248	ENSGGOG00000028510	-	100	49.248	Gorilla_gorilla
ENSCCAG00000023170	-	86	52.119	ENSGGOG00000022340	-	80	56.338	Gorilla_gorilla
ENSCCAG00000023170	-	100	55.088	ENSHGLG00000005772	HNRNPC	92	59.929	Heterocephalus_glaber_female
ENSCCAG00000023170	-	98	60.090	ENSHGLG00000015984	-	88	57.018	Heterocephalus_glaber_female
ENSCCAG00000023170	-	95	48.617	ENSHGLG00000014317	-	89	47.826	Heterocephalus_glaber_female
ENSCCAG00000023170	-	98	60.090	ENSHGLG00100017195	-	88	57.018	Heterocephalus_glaber_male
ENSCCAG00000023170	-	95	48.617	ENSHGLG00100019072	-	89	47.826	Heterocephalus_glaber_male
ENSCCAG00000023170	-	100	54.386	ENSHGLG00100001282	-	92	59.220	Heterocephalus_glaber_male
ENSCCAG00000023170	-	95	55.738	ENSSTOG00000021413	-	85	54.724	Ictidomys_tridecemlineatus
ENSCCAG00000023170	-	100	61.628	ENSJJAG00000019720	-	88	60.755	Jaculus_jaculus
ENSCCAG00000023170	-	87	53.782	ENSJJAG00000019199	-	89	51.136	Jaculus_jaculus
ENSCCAG00000023170	-	79	47.087	ENSJJAG00000000615	-	89	44.400	Jaculus_jaculus
ENSCCAG00000023170	-	100	54.464	ENSJJAG00000020950	-	90	53.680	Jaculus_jaculus
ENSCCAG00000023170	-	100	61.922	ENSJJAG00000014312	-	92	61.922	Jaculus_jaculus
ENSCCAG00000023170	-	100	56.180	ENSJJAG00000017581	-	91	56.180	Jaculus_jaculus
ENSCCAG00000023170	-	88	48.750	ENSLACG00000012197	-	89	50.741	Latimeria_chalumnae
ENSCCAG00000023170	-	92	52.727	ENSLAFG00000009341	HNRNPC	81	57.721	Loxodonta_africana
ENSCCAG00000023170	-	76	58.654	ENSMFAG00000031240	-	83	62.981	Macaca_fascicularis
ENSCCAG00000023170	-	80	62.212	ENSMFAG00000000371	-	77	62.212	Macaca_fascicularis
ENSCCAG00000023170	-	100	58.672	ENSMFAG00000002531	HNRNPC	91	62.313	Macaca_fascicularis
ENSCCAG00000023170	-	96	57.634	ENSMMUG00000018813	-	100	65.637	Macaca_mulatta
ENSCCAG00000023170	-	92	53.846	ENSMMUG00000014809	HNRNPC	80	55.556	Macaca_mulatta
ENSCCAG00000023170	-	93	58.716	ENSMMUG00000016162	-	78	57.798	Macaca_mulatta
ENSCCAG00000023170	-	100	55.390	ENSMMUG00000046109	-	90	53.903	Macaca_mulatta
ENSCCAG00000023170	-	84	49.048	ENSMNEG00000041647	-	82	49.738	Macaca_nemestrina
ENSCCAG00000023170	-	100	71.053	ENSMNEG00000042280	-	90	72.889	Macaca_nemestrina
ENSCCAG00000023170	-	99	55.970	ENSMLEG00000036782	-	93	63.774	Mandrillus_leucophaeus
ENSCCAG00000023170	-	100	59.041	ENSMLEG00000040545	-	91	62.687	Mandrillus_leucophaeus
ENSCCAG00000023170	-	100	55.439	ENSMAUG00000000739	Hnrnpc	92	63.121	Mesocricetus_auratus
ENSCCAG00000023170	-	100	58.824	ENSMICG00000007682	HNRNPC	91	62.454	Microcebus_murinus
ENSCCAG00000023170	-	92	51.261	ENSMICG00000028823	-	78	52.521	Microcebus_murinus
ENSCCAG00000023170	-	82	80.000	ENSMICG00000031852	-	92	56.071	Microcebus_murinus
ENSCCAG00000023170	-	100	56.631	ENSMOCG00000001623	-	92	64.493	Microtus_ochrogaster
ENSCCAG00000023170	-	100	58.824	ENSMODG00000006606	HNRNPC	91	63.569	Monodelphis_domestica
ENSCCAG00000023170	-	100	57.353	ENSMUSG00000060373	Hnrnpc	79	85.870	Mus_musculus
ENSCCAG00000023170	-	100	51.370	MGP_PahariEiJ_G0030256	Hnrnpc	92	58.824	Mus_pahari
ENSCCAG00000023170	-	100	54.737	MGP_SPRETEiJ_G0020126	Hnrnpc	92	62.411	Mus_spretus
ENSCCAG00000023170	-	80	59.174	ENSMPUG00000016707	-	81	61.468	Mustela_putorius_furo
ENSCCAG00000023170	-	100	58.456	ENSMPUG00000000164	-	91	63.197	Mustela_putorius_furo
ENSCCAG00000023170	-	100	59.851	ENSMLUG00000007853	HNRNPC	91	63.197	Myotis_lucifugus
ENSCCAG00000023170	-	98	58.594	ENSNGAG00000017860	-	91	58.203	Nannospalax_galili
ENSCCAG00000023170	-	93	43.902	ENSNGAG00000017956	-	90	45.122	Nannospalax_galili
ENSCCAG00000023170	-	100	62.963	ENSNGAG00000020552	-	92	62.963	Nannospalax_galili
ENSCCAG00000023170	-	100	46.332	ENSNLEG00000009500	-	90	45.946	Nomascus_leucogenys
ENSCCAG00000023170	-	92	48.305	ENSNLEG00000028034	-	76	48.305	Nomascus_leucogenys
ENSCCAG00000023170	-	80	56.087	ENSNLEG00000014362	HNRNPC	75	58.696	Nomascus_leucogenys
ENSCCAG00000023170	-	86	56.332	ENSNLEG00000018726	-	81	62.673	Nomascus_leucogenys
ENSCCAG00000023170	-	71	82.927	ENSMEUG00000010928	-	52	82.927	Notamacropus_eugenii
ENSCCAG00000023170	-	67	80.000	ENSOPRG00000002800	HNRNPC	74	80.000	Ochotona_princeps
ENSCCAG00000023170	-	98	52.060	ENSODEG00000001160	-	90	54.753	Octodon_degus
ENSCCAG00000023170	-	99	54.440	ENSODEG00000012803	-	93	57.812	Octodon_degus
ENSCCAG00000023170	-	100	54.930	ENSODEG00000020161	-	92	57.801	Octodon_degus
ENSCCAG00000023170	-	100	48.352	ENSODEG00000017188	-	91	51.111	Octodon_degus
ENSCCAG00000023170	-	100	54.138	ENSODEG00000000603	-	92	57.639	Octodon_degus
ENSCCAG00000023170	-	100	56.827	ENSODEG00000008102	-	91	59.925	Octodon_degus
ENSCCAG00000023170	-	100	60.595	ENSOANG00000015707	HNRNPC	91	63.569	Ornithorhynchus_anatinus
ENSCCAG00000023170	-	100	56.690	ENSOCUG00000015029	HNRNPC	92	61.210	Oryctolagus_cuniculus
ENSCCAG00000023170	-	100	56.690	ENSOCUG00000000339	-	92	61.210	Oryctolagus_cuniculus
ENSCCAG00000023170	-	100	55.986	ENSOCUG00000008851	-	92	60.498	Oryctolagus_cuniculus
ENSCCAG00000023170	-	100	52.863	ENSOGAG00000033117	-	88	52.119	Otolemur_garnettii
ENSCCAG00000023170	-	100	56.134	ENSOGAG00000029866	-	91	56.506	Otolemur_garnettii
ENSCCAG00000023170	-	100	61.567	ENSOGAG00000032454	-	91	60.821	Otolemur_garnettii
ENSCCAG00000023170	-	100	46.970	ENSOGAG00000032179	-	91	49.618	Otolemur_garnettii
ENSCCAG00000023170	-	100	58.148	ENSOGAG00000032867	-	92	60.000	Otolemur_garnettii
ENSCCAG00000023170	-	100	58.889	ENSOGAG00000012543	-	92	60.741	Otolemur_garnettii
ENSCCAG00000023170	-	100	56.940	ENSOARG00000019672	-	91	60.432	Ovis_aries
ENSCCAG00000023170	-	86	54.167	ENSOARG00000010292	-	75	54.651	Ovis_aries
ENSCCAG00000023170	-	92	53.509	ENSPPAG00000041389	-	51	77.064	Pan_paniscus
ENSCCAG00000023170	-	86	56.723	ENSPPAG00000034008	-	81	62.212	Pan_paniscus
ENSCCAG00000023170	-	98	52.800	ENSPPAG00000030712	-	89	52.000	Pan_paniscus
ENSCCAG00000023170	-	99	47.148	ENSPPAG00000033436	-	98	50.570	Pan_paniscus
ENSCCAG00000023170	-	100	56.491	ENSPPRG00000008763	HNRNPC	92	60.993	Panthera_pardus
ENSCCAG00000023170	-	100	59.191	ENSPTIG00000021061	HNRNPC	91	63.941	Panthera_tigris_altaica
ENSCCAG00000023170	-	89	55.785	ENSPTRG00000043496	-	70	58.216	Pan_troglodytes
ENSCCAG00000023170	-	99	46.768	ENSPTRG00000045559	-	98	50.190	Pan_troglodytes
ENSCCAG00000023170	-	100	56.098	ENSPTRG00000043469	-	91	53.036	Pan_troglodytes
ENSCCAG00000023170	-	100	56.338	ENSPTRG00000006118	HNRNPC	92	59.786	Pan_troglodytes
ENSCCAG00000023170	-	97	38.168	ENSPTRG00000043617	-	88	35.878	Pan_troglodytes
ENSCCAG00000023170	-	100	61.154	ENSPANG00000035897	-	91	62.646	Papio_anubis
ENSCCAG00000023170	-	100	53.020	ENSPANG00000020782	-	92	54.730	Papio_anubis
ENSCCAG00000023170	-	76	57.212	ENSPANG00000018274	-	83	60.096	Papio_anubis
ENSCCAG00000023170	-	92	57.480	ENSPANG00000031574	-	79	60.956	Papio_anubis
ENSCCAG00000023170	-	100	54.286	ENSPSIG00000012177	-	92	59.928	Pelodiscus_sinensis
ENSCCAG00000023170	-	100	57.634	ENSPEMG00000017675	-	91	58.397	Peromyscus_maniculatus_bairdii
ENSCCAG00000023170	-	100	55.439	ENSPEMG00000017899	-	92	63.121	Peromyscus_maniculatus_bairdii
ENSCCAG00000023170	-	100	58.456	ENSPCIG00000020021	-	91	63.197	Phascolarctos_cinereus
ENSCCAG00000023170	-	100	56.667	ENSPPYG00000001860	-	91	57.090	Pongo_abelii
ENSCCAG00000023170	-	100	59.041	ENSPPYG00000005593	HNRNPC	91	62.687	Pongo_abelii
ENSCCAG00000023170	-	86	76.147	ENSPCAG00000003025	HNRNPC	68	76.147	Procavia_capensis
ENSCCAG00000023170	-	100	58.824	ENSPCOG00000022866	HNRNPC	91	62.454	Propithecus_coquereli
ENSCCAG00000023170	-	80	55.844	ENSPVAG00000004499	HNRNPC	75	60.173	Pteropus_vampyrus
ENSCCAG00000023170	-	100	55.914	ENSRNOG00000050800	Hnrnpc	92	63.768	Rattus_norvegicus
ENSCCAG00000023170	-	100	57.353	ENSRNOG00000011621	LOC100911576	91	65.428	Rattus_norvegicus
ENSCCAG00000023170	-	100	56.338	ENSRBIG00000038355	HNRNPC	92	59.786	Rhinopithecus_bieti
ENSCCAG00000023170	-	100	53.208	ENSRBIG00000006622	-	90	52.453	Rhinopithecus_bieti
ENSCCAG00000023170	-	100	58.007	ENSRROG00000006722	HNRNPC	92	57.706	Rhinopithecus_roxellana
ENSCCAG00000023170	-	93	51.339	ENSRROG00000029991	-	80	54.709	Rhinopithecus_roxellana
ENSCCAG00000023170	-	79	60.550	ENSRROG00000031669	-	90	60.550	Rhinopithecus_roxellana
ENSCCAG00000023170	-	80	58.716	ENSRROG00000036842	-	81	61.468	Rhinopithecus_roxellana
ENSCCAG00000023170	-	100	61.905	ENSSBOG00000032742	-	95	61.472	Saimiri_boliviensis_boliviensis
ENSCCAG00000023170	-	81	56.731	ENSSBOG00000028154	-	80	55.882	Saimiri_boliviensis_boliviensis
ENSCCAG00000023170	-	98	56.071	ENSSBOG00000024757	HNRNPC	91	59.567	Saimiri_boliviensis_boliviensis
ENSCCAG00000023170	-	99	55.426	ENSSBOG00000022725	-	90	55.426	Saimiri_boliviensis_boliviensis
ENSCCAG00000023170	-	78	61.765	ENSSBOG00000028896	-	84	61.765	Saimiri_boliviensis_boliviensis
ENSCCAG00000023170	-	100	55.556	ENSSHAG00000006145	HNRNPC	92	60.000	Sarcophilus_harrisii
ENSCCAG00000023170	-	83	76.147	ENSSARG00000003711	HNRNPC	65	77.778	Sorex_araneus
ENSCCAG00000023170	-	100	53.114	ENSSPUG00000018728	-	92	59.341	Sphenodon_punctatus
ENSCCAG00000023170	-	100	58.824	ENSSSCG00000038947	HNRNPC	91	63.941	Sus_scrofa
ENSCCAG00000023170	-	100	57.042	ENSTTRG00000016055	HNRNPC	92	59.574	Tursiops_truncatus
ENSCCAG00000023170	-	100	56.140	ENSUMAG00000003799	HNRNPC	92	60.638	Ursus_maritimus
ENSCCAG00000023170	-	100	56.491	ENSVPAG00000007337	HNRNPC	92	60.993	Vicugna_pacos
ENSCCAG00000023170	-	86	53.175	ENSVVUG00000012230	-	75	59.740	Vulpes_vulpes
ENSCCAG00000023170	-	100	54.615	ENSVVUG00000009265	-	91	58.935	Vulpes_vulpes