EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000023563 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 3456 bases
Position: chrKV389466.1:499268-502723
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000011628	RRM_1	PF00076.22	4.6e-16	1	1
ENSCCAP00000011622	RRM_1	PF00076.22	5e-16	1	1
ENSCCAP00000011628	RRM_3	PF08777.11	4.4e-22	1	1
ENSCCAP00000011622	RRM_3	PF08777.11	4.6e-22	1	1
ENSCCAP00000011622	La	PF05383.17	1.5e-20	1	1
ENSCCAP00000011628	La	PF05383.17	1.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000029030	-	1623	-	ENSCCAP00000011622	540 (aa)	-	A0A2K5Q6V4
ENSCCAT00000029036	-	1539	-	ENSCCAP00000011628	512 (aa)	-	A0A2K5Q6U7

Gene Model

Click here to download ENSCCAG00000023563's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000023563's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000023563	-	98	87.365	ENSCCAG00000026787	-	95	87.365

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000023563	-	100	83.696	ENSG00000174720	LARP7	97	86.842	Homo_sapiens
ENSCCAG00000023563	-	99	50.817	ENSAPOG00000014570	larp7	95	50.903	Acanthochromis_polyacanthus
ENSCCAG00000023563	-	100	76.909	ENSAMEG00000015642	LARP7	95	79.242	Ailuropoda_melanoleuca
ENSCCAG00000023563	-	99	50.372	ENSACIG00000023850	larp7	95	48.909	Amphilophus_citrinellus
ENSCCAG00000023563	-	99	50.182	ENSAOCG00000016160	larp7	95	48.474	Amphiprion_ocellaris
ENSCCAG00000023563	-	99	50.182	ENSAPEG00000021823	larp7	95	48.474	Amphiprion_percula
ENSCCAG00000023563	-	99	51.180	ENSATEG00000016238	larp7	95	50.178	Anabas_testudineus
ENSCCAG00000023563	-	99	64.860	ENSAPLG00000012887	LARP7	95	65.157	Anas_platyrhynchos
ENSCCAG00000023563	-	99	62.837	ENSACAG00000010662	LARP7	91	62.118	Anolis_carolinensis
ENSCCAG00000023563	-	100	70.985	ENSANAG00000022318	-	95	72.232	Aotus_nancymaae
ENSCCAG00000023563	-	98	86.727	ENSANAG00000031139	-	95	86.727	Aotus_nancymaae
ENSCCAG00000023563	-	99	48.352	ENSAMXG00000002549	larp7	94	50.277	Astyanax_mexicanus
ENSCCAG00000023563	-	100	75.499	ENSBTAG00000009632	LARP7	93	77.617	Bos_taurus
ENSCCAG00000023563	-	100	84.755	ENSCJAG00000003711	LARP7	95	86.643	Callithrix_jacchus
ENSCCAG00000023563	-	100	75.632	ENSCAFG00000011715	LARP7	95	78.597	Canis_familiaris
ENSCCAG00000023563	-	100	76.545	ENSCAFG00020017225	LARP7	95	78.881	Canis_lupus_dingo
ENSCCAG00000023563	-	99	67.043	ENSCHIG00000013971	-	96	67.043	Capra_hircus
ENSCCAG00000023563	-	100	77.132	ENSCHIG00000014163	-	95	77.658	Capra_hircus
ENSCCAG00000023563	-	99	71.087	ENSTSYG00000035188	-	98	70.471	Carlito_syrichta
ENSCCAG00000023563	-	93	77.821	ENSTSYG00000006769	-	95	78.530	Carlito_syrichta
ENSCCAG00000023563	-	100	67.593	ENSCAPG00000009328	LARP7	95	67.593	Cavia_aperea
ENSCCAG00000023563	-	100	75.461	ENSCPOG00000011830	LARP7	96	74.819	Cavia_porcellus
ENSCCAG00000023563	-	100	83.122	ENSCATG00000043535	LARP7	95	84.477	Cercocebus_atys
ENSCCAG00000023563	-	100	77.901	ENSCLAG00000005894	LARP7	95	77.901	Chinchilla_lanigera
ENSCCAG00000023563	-	100	82.940	ENSCSAG00000003810	LARP7	95	84.296	Chlorocebus_sabaeus
ENSCCAG00000023563	-	97	66.728	ENSCHOG00000008967	-	100	67.897	Choloepus_hoffmanni
ENSCCAG00000023563	-	100	77.049	ENSCHOG00000002379	-	95	77.049	Choloepus_hoffmanni
ENSCCAG00000023563	-	100	64.311	ENSCPBG00000004919	LARP7	96	65.905	Chrysemys_picta_bellii
ENSCCAG00000023563	-	100	82.790	ENSCANG00000031482	LARP7	94	84.324	Colobus_angolensis_palliatus
ENSCCAG00000023563	-	89	67.629	ENSCGRG00001012747	-	95	67.629	Cricetulus_griseus_chok1gshd
ENSCCAG00000023563	-	100	75.963	ENSCGRG00001025050	-	96	75.963	Cricetulus_griseus_chok1gshd
ENSCCAG00000023563	-	95	68.992	ENSCGRG00000007642	-	94	68.992	Cricetulus_griseus_crigri
ENSCCAG00000023563	-	95	69.786	ENSCGRG00000001141	-	95	69.786	Cricetulus_griseus_crigri
ENSCCAG00000023563	-	99	51.282	ENSCSEG00000009088	larp7	95	50.733	Cynoglossus_semilaevis
ENSCCAG00000023563	-	99	51.941	ENSCVAG00000016852	larp7	80	66.120	Cyprinodon_variegatus
ENSCCAG00000023563	-	99	52.897	ENSDARG00000017315	larp7	93	52.336	Danio_rerio
ENSCCAG00000023563	-	100	75.812	ENSDNOG00000013761	LARP7	95	76.481	Dasypus_novemcinctus
ENSCCAG00000023563	-	100	78.108	ENSDORG00000008896	-	95	77.617	Dipodomys_ordii
ENSCCAG00000023563	-	100	73.188	ENSETEG00000011692	LARP7	95	73.188	Echinops_telfairi
ENSCCAG00000023563	-	100	76.492	ENSEASG00005005592	LARP7	95	78.559	Equus_asinus_asinus
ENSCCAG00000023563	-	100	77.034	ENSECAG00000000834	LARP7	95	79.099	Equus_caballus
ENSCCAG00000023563	-	95	75.822	ENSEEUG00000012824	LARP7	95	75.822	Erinaceus_europaeus
ENSCCAG00000023563	-	99	49.911	ENSELUG00000015341	larp7	88	69.061	Esox_lucius
ENSCCAG00000023563	-	100	78.947	ENSFCAG00000031966	LARP7	95	79.099	Felis_catus
ENSCCAG00000023563	-	99	65.241	ENSFALG00000000972	LARP7	93	65.432	Ficedula_albicollis
ENSCCAG00000023563	-	100	71.429	ENSFDAG00000011855	-	95	72.161	Fukomys_damarensis
ENSCCAG00000023563	-	100	78.309	ENSFDAG00000014048	-	96	77.437	Fukomys_damarensis
ENSCCAG00000023563	-	99	48.901	ENSFHEG00000021652	larp7	95	49.730	Fundulus_heteroclitus
ENSCCAG00000023563	-	99	65.071	ENSGALG00000012048	LARP7	94	65.432	Gallus_gallus
ENSCCAG00000023563	-	99	50.823	ENSGAFG00000015400	larp7	94	50.272	Gambusia_affinis
ENSCCAG00000023563	-	99	47.679	ENSGACG00000019618	larp7	80	63.736	Gasterosteus_aculeatus
ENSCCAG00000023563	-	100	64.085	ENSGAGG00000024520	LARP7	95	65.905	Gopherus_agassizii
ENSCCAG00000023563	-	91	80.198	ENSGGOG00000006438	-	97	82.016	Gorilla_gorilla
ENSCCAG00000023563	-	100	83.696	ENSGGOG00000023567	-	95	85.018	Gorilla_gorilla
ENSCCAG00000023563	-	99	48.947	ENSHBUG00000019223	larp7	95	49.541	Haplochromis_burtoni
ENSCCAG00000023563	-	100	76.449	ENSHGLG00000002716	LARP7	96	77.117	Heterocephalus_glaber_female
ENSCCAG00000023563	-	100	76.449	ENSHGLG00100000332	LARP7	96	77.117	Heterocephalus_glaber_male
ENSCCAG00000023563	-	99	49.907	ENSHCOG00000000664	LARP7	95	51.866	Hippocampus_comes
ENSCCAG00000023563	-	99	49.286	ENSIPUG00000019886	larp7	94	50.446	Ictalurus_punctatus
ENSCCAG00000023563	-	100	76.503	ENSSTOG00000011789	LARP7	95	80.832	Ictidomys_tridecemlineatus
ENSCCAG00000023563	-	100	76.364	ENSJJAG00000000257	-	96	76.439	Jaculus_jaculus
ENSCCAG00000023563	-	99	47.594	ENSLBEG00000020062	larp7	95	47.826	Labrus_bergylta
ENSCCAG00000023563	-	100	56.574	ENSLACG00000013744	LARP7	95	56.499	Latimeria_chalumnae
ENSCCAG00000023563	-	99	42.642	ENSLOCG00000011608	larp7	95	43.952	Lepisosteus_oculatus
ENSCCAG00000023563	-	100	79.053	ENSLAFG00000015769	LARP7	95	78.689	Loxodonta_africana
ENSCCAG00000023563	-	100	83.122	ENSMFAG00000036506	LARP7	95	84.477	Macaca_fascicularis
ENSCCAG00000023563	-	100	83.122	ENSMMUG00000017911	LARP7	95	84.477	Macaca_mulatta
ENSCCAG00000023563	-	100	83.303	ENSMNEG00000034758	LARP7	100	83.532	Macaca_nemestrina
ENSCCAG00000023563	-	100	83.303	ENSMLEG00000026154	LARP7	95	84.657	Mandrillus_leucophaeus
ENSCCAG00000023563	-	99	48.270	ENSMAMG00000005835	larp7	95	49.540	Mastacembelus_armatus
ENSCCAG00000023563	-	99	66.062	ENSMGAG00000010947	LARP7	95	66.606	Meleagris_gallopavo
ENSCCAG00000023563	-	100	63.501	ENSMAUG00000005625	-	95	63.687	Mesocricetus_auratus
ENSCCAG00000023563	-	100	80.218	ENSMICG00000031035	LARP7	95	80.686	Microcebus_murinus
ENSCCAG00000023563	-	100	75.000	ENSMOCG00000012519	-	96	75.000	Microtus_ochrogaster
ENSCCAG00000023563	-	93	72.387	ENSMOCG00000015761	-	100	72.387	Microtus_ochrogaster
ENSCCAG00000023563	-	99	68.327	ENSMODG00000005669	LARP7	95	67.438	Monodelphis_domestica
ENSCCAG00000023563	-	100	75.137	MGP_CAROLIEiJ_G0025613	-	96	75.137	Mus_caroli
ENSCCAG00000023563	-	100	74.954	ENSMUSG00000027968	Larp7	96	74.954	Mus_musculus
ENSCCAG00000023563	-	100	74.908	MGP_PahariEiJ_G0027060	-	96	74.908	Mus_pahari
ENSCCAG00000023563	-	100	75.182	MGP_SPRETEiJ_G0026566	Larp7	96	75.182	Mus_spretus
ENSCCAG00000023563	-	99	76.952	ENSMPUG00000018052	-	100	77.143	Mustela_putorius_furo
ENSCCAG00000023563	-	100	76.225	ENSMPUG00000008331	-	95	78.700	Mustela_putorius_furo
ENSCCAG00000023563	-	89	70.120	ENSMLUG00000027214	LARP7	100	70.120	Myotis_lucifugus
ENSCCAG00000023563	-	100	73.285	ENSNGAG00000007368	-	96	73.921	Nannospalax_galili
ENSCCAG00000023563	-	100	84.392	ENSNLEG00000016354	LARP7	94	85.199	Nomascus_leucogenys
ENSCCAG00000023563	-	91	66.469	ENSMEUG00000004739	LARP7	100	67.057	Notamacropus_eugenii
ENSCCAG00000023563	-	90	81.955	ENSOPRG00000009594	-	83	81.955	Ochotona_princeps
ENSCCAG00000023563	-	95	75.862	ENSODEG00000011121	LARP7	94	75.614	Octodon_degus
ENSCCAG00000023563	-	99	68.262	ENSOANG00000009298	LARP7	94	68.486	Ornithorhynchus_anatinus
ENSCCAG00000023563	-	100	75.226	ENSOCUG00000007073	LARP7	95	77.158	Oryctolagus_cuniculus
ENSCCAG00000023563	-	99	50.377	ENSORLG00000004978	larp7	94	50.189	Oryzias_latipes
ENSCCAG00000023563	-	99	50.566	ENSORLG00020013825	larp7	94	50.377	Oryzias_latipes_hni
ENSCCAG00000023563	-	99	50.000	ENSOMEG00000006920	larp7	94	51.859	Oryzias_melastigma
ENSCCAG00000023563	-	100	78.700	ENSOGAG00000001643	LARP7	95	80.251	Otolemur_garnettii
ENSCCAG00000023563	-	100	77.076	ENSOARG00000001809	LARP7	95	78.237	Ovis_aries
ENSCCAG00000023563	-	100	84.029	ENSPPAG00000038420	LARP7	94	85.353	Pan_paniscus
ENSCCAG00000023563	-	100	78.804	ENSPPRG00000023256	LARP7	95	79.279	Panthera_pardus
ENSCCAG00000023563	-	96	77.652	ENSPTIG00000021146	LARP7	92	77.820	Panthera_tigris_altaica
ENSCCAG00000023563	-	100	84.058	ENSPTRG00000016380	LARP7	95	85.379	Pan_troglodytes
ENSCCAG00000023563	-	100	83.152	ENSPANG00000006701	LARP7	94	84.838	Papio_anubis
ENSCCAG00000023563	-	99	52.459	ENSPKIG00000023484	larp7	94	52.632	Paramormyrops_kingsleyae
ENSCCAG00000023563	-	99	65.054	ENSPSIG00000014419	LARP7	93	65.054	Pelodiscus_sinensis
ENSCCAG00000023563	-	100	73.703	ENSPEMG00000013978	-	96	73.524	Peromyscus_maniculatus_bairdii
ENSCCAG00000023563	-	100	33.690	ENSPMAG00000005362	larp7	93	33.868	Petromyzon_marinus
ENSCCAG00000023563	-	100	67.376	ENSPCIG00000020284	LARP7	92	79.091	Phascolarctos_cinereus
ENSCCAG00000023563	-	99	48.909	ENSPFOG00000000265	larp7	95	47.928	Poecilia_formosa
ENSCCAG00000023563	-	99	49.634	ENSPLAG00000012181	larp7	94	48.708	Poecilia_latipinna
ENSCCAG00000023563	-	99	49.634	ENSPMEG00000007182	larp7	94	48.708	Poecilia_mexicana
ENSCCAG00000023563	-	99	48.175	ENSPREG00000019513	larp7	94	48.619	Poecilia_reticulata
ENSCCAG00000023563	-	100	83.333	ENSPPYG00000015010	LARP7	95	84.657	Pongo_abelii
ENSCCAG00000023563	-	62	96.154	ENSPCAG00000003373	-	67	96.154	Procavia_capensis
ENSCCAG00000023563	-	95	64.775	ENSPCOG00000023946	LARP7	94	69.565	Propithecus_coquereli
ENSCCAG00000023563	-	100	73.960	ENSPVAG00000000282	LARP7	95	75.315	Pteropus_vampyrus
ENSCCAG00000023563	-	99	50.635	ENSPNAG00000017554	larp7	95	49.909	Pygocentrus_nattereri
ENSCCAG00000023563	-	100	73.945	ENSRNOG00000048989	Larp7	96	73.945	Rattus_norvegicus
ENSCCAG00000023563	-	84	96.296	ENSRBIG00000031916	LARP7	93	96.296	Rhinopithecus_bieti
ENSCCAG00000023563	-	100	82.759	ENSRROG00000033414	LARP7	95	84.116	Rhinopithecus_roxellana
ENSCCAG00000023563	-	98	86.643	ENSSBOG00000030886	-	95	86.643	Saimiri_boliviensis_boliviensis
ENSCCAG00000023563	-	99	71.429	ENSSBOG00000022652	-	96	71.429	Saimiri_boliviensis_boliviensis
ENSCCAG00000023563	-	100	65.901	ENSSHAG00000008153	LARP7	95	66.310	Sarcophilus_harrisii
ENSCCAG00000023563	-	99	51.273	ENSSFOG00015019344	larp7	94	51.460	Scleropages_formosus
ENSCCAG00000023563	-	99	49.091	ENSSMAG00000011296	larp7	95	49.556	Scophthalmus_maximus
ENSCCAG00000023563	-	99	50.272	ENSSDUG00000007045	larp7	95	50.454	Seriola_dumerili
ENSCCAG00000023563	-	56	67.434	ENSSARG00000000190	-	99	69.055	Sorex_araneus
ENSCCAG00000023563	-	99	50.452	ENSSPAG00000016066	larp7	95	48.913	Stegastes_partitus
ENSCCAG00000023563	-	100	77.939	ENSSSCG00000009119	LARP7	95	78.957	Sus_scrofa
ENSCCAG00000023563	-	99	66.065	ENSTGUG00000001804	LARP7	95	65.714	Taeniopygia_guttata
ENSCCAG00000023563	-	99	48.282	ENSTRUG00000004996	larp7	95	48.184	Takifugu_rubripes
ENSCCAG00000023563	-	99	44.587	ENSTNIG00000007183	larp7	95	44.973	Tetraodon_nigroviridis
ENSCCAG00000023563	-	100	72.182	ENSTBEG00000009188	LARP7	95	72.563	Tupaia_belangeri
ENSCCAG00000023563	-	93	76.718	ENSTTRG00000005233	LARP7	100	76.718	Tursiops_truncatus
ENSCCAG00000023563	-	100	76.225	ENSUAMG00000000836	LARP7	95	78.739	Ursus_americanus
ENSCCAG00000023563	-	97	76.782	ENSUMAG00000002263	LARP7	93	78.062	Ursus_maritimus
ENSCCAG00000023563	-	100	76.770	ENSVPAG00000010502	LARP7	95	77.939	Vicugna_pacos
ENSCCAG00000023563	-	100	76.727	ENSVVUG00000002274	LARP7	95	79.061	Vulpes_vulpes
ENSCCAG00000023563	-	99	56.351	ENSXETG00000024097	larp7	94	56.351	Xenopus_tropicalis
ENSCCAG00000023563	-	99	49.531	ENSXCOG00000004883	larp7	83	66.111	Xiphophorus_couchianus
ENSCCAG00000023563	-	99	48.446	ENSXMAG00000008479	larp7	95	48.668	Xiphophorus_maculatus