EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000023772 (Gene tree)
Gene ID: 108317280
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 15096 bases
Position: chrKV389625.1:4558194-4573289
Accession: 108317280
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000012009	TRM13	PF05206.14	6.9e-93	1	1
ENSCCAP00000012018	zf-U11-48K	PF05253.12	7.2e-10	1	1
ENSCCAP00000012009	zf-U11-48K	PF05253.12	4.1e-09	1	1
ENSCCAP00000012018	zf-TRM13_CCCH	PF11722.8	6.7e-14	1	1
ENSCCAP00000012009	zf-TRM13_CCCH	PF11722.8	1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000029431	TRMT13-202	330	-	ENSCCAP00000012018	109 (aa)	-	A0A2K5Q7Y4
ENSCCAT00000029422	TRMT13-201	2473	XM_017547626	ENSCCAP00000012009	481 (aa)	XP_017403115	A0A2K5Q836

Gene Model

Click here to download ENSCCAG00000023772's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000023772's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000023772	TRMT13	100	97.297	ENSG00000122435	TRMT13	100	97.297	Homo_sapiens
ENSCCAG00000023772	TRMT13	86	59.574	ENSAPOG00000015131	trmt13	99	48.089	Acanthochromis_polyacanthus
ENSCCAG00000023772	TRMT13	100	91.743	ENSAMEG00000008917	TRMT13	100	90.437	Ailuropoda_melanoleuca
ENSCCAG00000023772	TRMT13	97	55.660	ENSACIG00000005804	trmt13	97	50.415	Amphilophus_citrinellus
ENSCCAG00000023772	TRMT13	87	58.947	ENSAOCG00000023585	trmt13	99	48.406	Amphiprion_ocellaris
ENSCCAG00000023772	TRMT13	87	58.947	ENSAPEG00000004025	trmt13	99	48.016	Amphiprion_percula
ENSCCAG00000023772	TRMT13	87	64.211	ENSATEG00000006597	trmt13	97	51.674	Anabas_testudineus
ENSCCAG00000023772	TRMT13	88	67.371	ENSAPLG00000014924	TRMT13	99	67.371	Anas_platyrhynchos
ENSCCAG00000023772	TRMT13	96	64.224	ENSACAG00000003498	TRMT13	98	64.224	Anolis_carolinensis
ENSCCAG00000023772	TRMT13	100	99.083	ENSANAG00000019525	TRMT13	100	99.083	Aotus_nancymaae
ENSCCAG00000023772	TRMT13	96	52.754	ENSACLG00000020018	trmt13	99	52.754	Astatotilapia_calliptera
ENSCCAG00000023772	TRMT13	95	54.818	ENSAMXG00000017963	trmt13	97	55.246	Astyanax_mexicanus
ENSCCAG00000023772	TRMT13	100	90.229	ENSBTAG00000015781	TRMT13	100	90.229	Bos_taurus
ENSCCAG00000023772	TRMT13	100	99.083	ENSCJAG00000000200	TRMT13	99	99.083	Callithrix_jacchus
ENSCCAG00000023772	TRMT13	65	92.357	ENSCAFG00000020021	TRMT13	99	92.357	Canis_familiaris
ENSCCAG00000023772	TRMT13	100	87.273	ENSCAFG00020011572	TRMT13	95	91.273	Canis_lupus_dingo
ENSCCAG00000023772	TRMT13	100	90.644	ENSCHIG00000015395	TRMT13	100	90.644	Capra_hircus
ENSCCAG00000023772	TRMT13	98	82.452	ENSTSYG00000010811	TRMT13	98	86.869	Carlito_syrichta
ENSCCAG00000023772	TRMT13	75	70.411	ENSCAPG00000009085	TRMT13	100	70.959	Cavia_aperea
ENSCCAG00000023772	TRMT13	100	89.397	ENSCPOG00000000694	TRMT13	100	89.397	Cavia_porcellus
ENSCCAG00000023772	TRMT13	100	97.248	ENSCATG00000033556	TRMT13	100	97.248	Cercocebus_atys
ENSCCAG00000023772	TRMT13	89	85.012	ENSCLAG00000008220	TRMT13	100	85.948	Chinchilla_lanigera
ENSCCAG00000023772	TRMT13	100	97.505	ENSCSAG00000001506	TRMT13	100	97.505	Chlorocebus_sabaeus
ENSCCAG00000023772	TRMT13	99	69.375	ENSCPBG00000026671	TRMT13	99	69.375	Chrysemys_picta_bellii
ENSCCAG00000023772	TRMT13	100	98.165	ENSCANG00000034659	TRMT13	100	98.165	Colobus_angolensis_palliatus
ENSCCAG00000023772	TRMT13	99	86.373	ENSCGRG00001021601	Trmt13	99	86.373	Cricetulus_griseus_chok1gshd
ENSCCAG00000023772	TRMT13	53	84.825	ENSCGRG00000000093	-	99	84.825	Cricetulus_griseus_crigri
ENSCCAG00000023772	TRMT13	98	48.414	ENSCSEG00000000591	trmt13	99	48.414	Cynoglossus_semilaevis
ENSCCAG00000023772	TRMT13	95	48.632	ENSCVAG00000017342	trmt13	93	49.895	Cyprinodon_variegatus
ENSCCAG00000023772	TRMT13	95	57.328	ENSDARG00000102846	trmt13	96	57.328	Danio_rerio
ENSCCAG00000023772	TRMT13	100	83.186	ENSDNOG00000001710	TRMT13	84	88.768	Dasypus_novemcinctus
ENSCCAG00000023772	TRMT13	100	88.073	ENSDORG00000015808	Trmt13	99	87.734	Dipodomys_ordii
ENSCCAG00000023772	TRMT13	95	30.290	FBgn0037435	CG18048	94	30.290	Drosophila_melanogaster
ENSCCAG00000023772	TRMT13	99	84.821	ENSETEG00000005819	TRMT13	99	75.574	Echinops_telfairi
ENSCCAG00000023772	TRMT13	95	45.376	ENSEBUG00000014444	trmt13	96	45.455	Eptatretus_burgeri
ENSCCAG00000023772	TRMT13	100	94.495	ENSEASG00005015918	TRMT13	100	92.516	Equus_asinus_asinus
ENSCCAG00000023772	TRMT13	100	94.495	ENSECAG00000022626	TRMT13	100	92.516	Equus_caballus
ENSCCAG00000023772	TRMT13	96	85.714	ENSEEUG00000000294	TRMT13	80	81.013	Erinaceus_europaeus
ENSCCAG00000023772	TRMT13	96	55.556	ENSELUG00000003803	trmt13	98	55.675	Esox_lucius
ENSCCAG00000023772	TRMT13	100	91.743	ENSFCAG00000030618	TRMT13	100	91.743	Felis_catus
ENSCCAG00000023772	TRMT13	100	66.055	ENSFALG00000002424	TRMT13	99	65.063	Ficedula_albicollis
ENSCCAG00000023772	TRMT13	100	89.908	ENSFDAG00000006342	TRMT13	99	90.756	Fukomys_damarensis
ENSCCAG00000023772	TRMT13	83	56.667	ENSFHEG00000022954	trmt13	97	51.621	Fundulus_heteroclitus
ENSCCAG00000023772	TRMT13	95	49.011	ENSGMOG00000013223	trmt13	100	49.451	Gadus_morhua
ENSCCAG00000023772	TRMT13	95	65.934	ENSGALG00000005290	TRMT13	98	64.968	Gallus_gallus
ENSCCAG00000023772	TRMT13	85	55.319	ENSGAFG00000001577	trmt13	81	51.882	Gambusia_affinis
ENSCCAG00000023772	TRMT13	89	58.763	ENSGACG00000013428	trmt13	97	51.613	Gasterosteus_aculeatus
ENSCCAG00000023772	TRMT13	100	69.502	ENSGAGG00000023303	TRMT13	99	73.455	Gopherus_agassizii
ENSCCAG00000023772	TRMT13	100	97.089	ENSGGOG00000005616	TRMT13	100	97.089	Gorilla_gorilla
ENSCCAG00000023772	TRMT13	96	52.966	ENSHBUG00000007754	trmt13	99	52.966	Haplochromis_burtoni
ENSCCAG00000023772	TRMT13	100	91.743	ENSHGLG00000002164	TRMT13	99	90.966	Heterocephalus_glaber_female
ENSCCAG00000023772	TRMT13	100	91.743	ENSHGLG00100001618	TRMT13	99	90.966	Heterocephalus_glaber_male
ENSCCAG00000023772	TRMT13	96	48.069	ENSHCOG00000020553	trmt13	98	47.357	Hippocampus_comes
ENSCCAG00000023772	TRMT13	98	55.626	ENSIPUG00000024787	trmt13	99	56.568	Ictalurus_punctatus
ENSCCAG00000023772	TRMT13	100	93.971	ENSSTOG00000013483	TRMT13	100	93.971	Ictidomys_tridecemlineatus
ENSCCAG00000023772	TRMT13	99	88.866	ENSJJAG00000018012	Trmt13	100	88.333	Jaculus_jaculus
ENSCCAG00000023772	TRMT13	64	50.160	ENSKMAG00000007639	trmt13	92	50.160	Kryptolebias_marmoratus
ENSCCAG00000023772	TRMT13	87	64.211	ENSLBEG00000020238	trmt13	99	51.357	Labrus_bergylta
ENSCCAG00000023772	TRMT13	96	62.017	ENSLACG00000013153	TRMT13	100	60.891	Latimeria_chalumnae
ENSCCAG00000023772	TRMT13	86	68.085	ENSLOCG00000000418	trmt13	97	59.130	Lepisosteus_oculatus
ENSCCAG00000023772	TRMT13	77	88.649	ENSLAFG00000002383	TRMT13	100	88.649	Loxodonta_africana
ENSCCAG00000023772	TRMT13	100	98.165	ENSMFAG00000034681	TRMT13	100	98.165	Macaca_fascicularis
ENSCCAG00000023772	TRMT13	100	98.165	ENSMMUG00000004243	TRMT13	100	98.165	Macaca_mulatta
ENSCCAG00000023772	TRMT13	100	98.165	ENSMNEG00000036102	TRMT13	100	98.165	Macaca_nemestrina
ENSCCAG00000023772	TRMT13	100	97.248	ENSMLEG00000034258	TRMT13	100	97.248	Mandrillus_leucophaeus
ENSCCAG00000023772	TRMT13	96	52.110	ENSMAMG00000016597	trmt13	98	52.110	Mastacembelus_armatus
ENSCCAG00000023772	TRMT13	96	52.542	ENSMZEG00005020959	trmt13	99	52.542	Maylandia_zebra
ENSCCAG00000023772	TRMT13	89	66.979	ENSMGAG00000006970	TRMT13	100	66.979	Meleagris_gallopavo
ENSCCAG00000023772	TRMT13	99	84.792	ENSMAUG00000010448	Trmt13	99	84.792	Mesocricetus_auratus
ENSCCAG00000023772	TRMT13	100	94.595	ENSMICG00000005283	TRMT13	100	94.595	Microcebus_murinus
ENSCCAG00000023772	TRMT13	100	83.486	ENSMOCG00000019914	Trmt13	99	81.875	Microtus_ochrogaster
ENSCCAG00000023772	TRMT13	72	53.165	ENSMMOG00000007762	trmt13	89	50.943	Mola_mola
ENSCCAG00000023772	TRMT13	100	76.106	ENSMODG00000003646	TRMT13	100	75.464	Monodelphis_domestica
ENSCCAG00000023772	TRMT13	94	56.311	ENSMALG00000020965	trmt13	99	49.585	Monopterus_albus
ENSCCAG00000023772	TRMT13	99	87.963	MGP_CAROLIEiJ_G0025568	Trmt13	99	85.954	Mus_caroli
ENSCCAG00000023772	TRMT13	99	86.111	ENSMUSG00000033439	Trmt13	99	85.954	Mus_musculus
ENSCCAG00000023772	TRMT13	99	87.037	MGP_PahariEiJ_G0027014	Trmt13	99	86.583	Mus_pahari
ENSCCAG00000023772	TRMT13	99	87.037	MGP_SPRETEiJ_G0026518	Trmt13	99	86.164	Mus_spretus
ENSCCAG00000023772	TRMT13	100	89.908	ENSMPUG00000012169	-	98	88.722	Mustela_putorius_furo
ENSCCAG00000023772	TRMT13	79	88.976	ENSMPUG00000002078	-	100	88.976	Mustela_putorius_furo
ENSCCAG00000023772	TRMT13	100	90.826	ENSMLUG00000002124	TRMT13	100	79.626	Myotis_lucifugus
ENSCCAG00000023772	TRMT13	96	48.305	ENSNBRG00000006783	trmt13	95	49.567	Neolamprologus_brichardi
ENSCCAG00000023772	TRMT13	100	97.248	ENSNLEG00000035917	TRMT13	100	97.248	Nomascus_leucogenys
ENSCCAG00000023772	TRMT13	100	57.273	ENSMEUG00000013346	-	100	72.177	Notamacropus_eugenii
ENSCCAG00000023772	TRMT13	100	87.156	ENSOPRG00000012048	TRMT13	67	89.706	Ochotona_princeps
ENSCCAG00000023772	TRMT13	100	88.991	ENSODEG00000006075	-	95	88.024	Octodon_degus
ENSCCAG00000023772	TRMT13	96	52.754	ENSONIG00000004574	trmt13	99	52.754	Oreochromis_niloticus
ENSCCAG00000023772	TRMT13	89	74.942	ENSOANG00000012057	TRMT13	99	74.942	Ornithorhynchus_anatinus
ENSCCAG00000023772	TRMT13	100	91.060	ENSOCUG00000023095	TRMT13	100	91.060	Oryctolagus_cuniculus
ENSCCAG00000023772	TRMT13	96	48.729	ENSORLG00000003320	trmt13	99	49.364	Oryzias_latipes
ENSCCAG00000023772	TRMT13	95	49.036	ENSORLG00020005972	trmt13	97	49.266	Oryzias_latipes_hni
ENSCCAG00000023772	TRMT13	96	52.654	ENSORLG00015002270	trmt13	99	52.654	Oryzias_latipes_hsok
ENSCCAG00000023772	TRMT13	97	51.797	ENSOMEG00000006724	trmt13	95	52.431	Oryzias_melastigma
ENSCCAG00000023772	TRMT13	100	91.743	ENSOGAG00000005618	TRMT13	97	91.476	Otolemur_garnettii
ENSCCAG00000023772	TRMT13	100	90.644	ENSOARG00000017983	TRMT13	100	90.644	Ovis_aries
ENSCCAG00000023772	TRMT13	100	97.248	ENSPPAG00000043736	TRMT13	100	96.674	Pan_paniscus
ENSCCAG00000023772	TRMT13	100	91.743	ENSPPRG00000003424	TRMT13	100	91.743	Panthera_pardus
ENSCCAG00000023772	TRMT13	100	91.743	ENSPTIG00000018598	TRMT13	100	91.743	Panthera_tigris_altaica
ENSCCAG00000023772	TRMT13	100	97.248	ENSPTRG00000001001	TRMT13	100	96.674	Pan_troglodytes
ENSCCAG00000023772	TRMT13	100	98.165	ENSPANG00000007598	TRMT13	100	98.165	Papio_anubis
ENSCCAG00000023772	TRMT13	96	56.739	ENSPKIG00000001514	trmt13	98	56.739	Paramormyrops_kingsleyae
ENSCCAG00000023772	TRMT13	86	69.544	ENSPSIG00000012703	TRMT13	99	69.544	Pelodiscus_sinensis
ENSCCAG00000023772	TRMT13	85	64.516	ENSPMGG00000013298	trmt13	94	52.034	Periophthalmus_magnuspinnatus
ENSCCAG00000023772	TRMT13	100	83.486	ENSPEMG00000000275	Trmt13	99	83.750	Peromyscus_maniculatus_bairdii
ENSCCAG00000023772	TRMT13	88	55.000	ENSPMAG00000000823	trmt13	97	46.392	Petromyzon_marinus
ENSCCAG00000023772	TRMT13	99	75.676	ENSPCIG00000007699	TRMT13	99	76.299	Phascolarctos_cinereus
ENSCCAG00000023772	TRMT13	99	49.061	ENSPFOG00000008675	trmt13	99	49.061	Poecilia_formosa
ENSCCAG00000023772	TRMT13	95	49.149	ENSPLAG00000009709	trmt13	99	49.149	Poecilia_latipinna
ENSCCAG00000023772	TRMT13	95	48.408	ENSPMEG00000022954	trmt13	99	48.408	Poecilia_mexicana
ENSCCAG00000023772	TRMT13	88	55.000	ENSPREG00000005645	trmt13	91	51.079	Poecilia_reticulata
ENSCCAG00000023772	TRMT13	100	96.466	ENSPPYG00000001120	TRMT13	100	96.466	Pongo_abelii
ENSCCAG00000023772	TRMT13	100	88.565	ENSPCAG00000002340	TRMT13	100	88.565	Procavia_capensis
ENSCCAG00000023772	TRMT13	100	93.347	ENSPCOG00000017984	TRMT13	100	93.347	Propithecus_coquereli
ENSCCAG00000023772	TRMT13	100	91.892	ENSPVAG00000017430	TRMT13	100	91.892	Pteropus_vampyrus
ENSCCAG00000023772	TRMT13	96	51.271	ENSPNYG00000013690	trmt13	99	51.271	Pundamilia_nyererei
ENSCCAG00000023772	TRMT13	98	55.391	ENSPNAG00000022130	trmt13	99	55.391	Pygocentrus_nattereri
ENSCCAG00000023772	TRMT13	99	86.111	ENSRNOG00000015140	Trmt13	96	85.954	Rattus_norvegicus
ENSCCAG00000023772	TRMT13	100	98.165	ENSRBIG00000037686	TRMT13	100	98.165	Rhinopithecus_bieti
ENSCCAG00000023772	TRMT13	100	98.165	ENSRROG00000044057	TRMT13	100	98.165	Rhinopithecus_roxellana
ENSCCAG00000023772	TRMT13	100	99.083	ENSSBOG00000026541	TRMT13	100	99.083	Saimiri_boliviensis_boliviensis
ENSCCAG00000023772	TRMT13	91	76.888	ENSSHAG00000005213	TRMT13	97	76.888	Sarcophilus_harrisii
ENSCCAG00000023772	TRMT13	96	54.158	ENSSFOG00015017560	trmt13	98	54.839	Scleropages_formosus
ENSCCAG00000023772	TRMT13	94	57.843	ENSSMAG00000014592	trmt13	99	50.509	Scophthalmus_maximus
ENSCCAG00000023772	TRMT13	98	55.556	ENSSDUG00000015508	trmt13	99	50.505	Seriola_dumerili
ENSCCAG00000023772	TRMT13	98	55.556	ENSSLDG00000019060	trmt13	98	50.513	Seriola_lalandi_dorsalis
ENSCCAG00000023772	TRMT13	97	83.962	ENSSARG00000010344	TRMT13	99	75.789	Sorex_araneus
ENSCCAG00000023772	TRMT13	96	67.819	ENSSPUG00000016339	TRMT13	100	67.819	Sphenodon_punctatus
ENSCCAG00000023772	TRMT13	95	51.613	ENSSPAG00000011922	trmt13	98	51.702	Stegastes_partitus
ENSCCAG00000023772	TRMT13	100	91.743	ENSSSCG00000006869	TRMT13	100	91.476	Sus_scrofa
ENSCCAG00000023772	TRMT13	97	66.453	ENSTGUG00000005253	TRMT13	100	66.453	Taeniopygia_guttata
ENSCCAG00000023772	TRMT13	90	55.102	ENSTRUG00000008400	trmt13	99	49.474	Takifugu_rubripes
ENSCCAG00000023772	TRMT13	86	75.962	ENSTBEG00000008911	TRMT13	100	75.962	Tupaia_belangeri
ENSCCAG00000023772	TRMT13	70	97.368	ENSTTRG00000015302	-	60	97.368	Tursiops_truncatus
ENSCCAG00000023772	TRMT13	100	88.991	ENSUAMG00000017251	TRMT13	100	85.031	Ursus_americanus
ENSCCAG00000023772	TRMT13	100	90.826	ENSUMAG00000007901	TRMT13	100	90.229	Ursus_maritimus
ENSCCAG00000023772	TRMT13	90	74.306	ENSVPAG00000001034	TRMT13	100	74.306	Vicugna_pacos
ENSCCAG00000023772	TRMT13	99	91.268	ENSVVUG00000021996	TRMT13	99	91.268	Vulpes_vulpes
ENSCCAG00000023772	TRMT13	91	65.657	ENSXETG00000013204	trmt13	96	56.587	Xenopus_tropicalis
ENSCCAG00000023772	TRMT13	87	55.208	ENSXCOG00000008120	-	88	55.208	Xiphophorus_couchianus
ENSCCAG00000023772	TRMT13	95	48.729	ENSXMAG00000010765	trmt13	99	48.729	Xiphophorus_maculatus