EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000023781 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: splicing factor 1 pseudogene
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 6441 bases
Position: chrKV389940.1:822402-828842
Accession: 108292934
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000012128	KH_1	PF00013.29	6e-06	1	1
ENSCCAP00000012147	KH_1	PF00013.29	8e-06	1	1
ENSCCAP00000012207	KH_1	PF00013.29	9e-06	1	1
ENSCCAP00000012179	KH_1	PF00013.29	9.2e-06	1	1
ENSCCAP00000012244	KH_1	PF00013.29	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000029622	-	1707	-	ENSCCAP00000012207	568 (aa)	-	A0A2K5Q8I4
ENSCCAT00000029562	-	1482	-	ENSCCAP00000012147	493 (aa)	-	A0A2K5Q8D0
ENSCCAT00000029679	-	312	-	ENSCCAP00000012263	103 (aa)	-	A0A2K5Q8M1
ENSCCAT00000029660	-	1575	-	ENSCCAP00000012244	524 (aa)	-	A0A2K5Q8S4
ENSCCAT00000029594	-	1731	-	ENSCCAP00000012179	576 (aa)	-	A0A2K5Q8L3
ENSCCAT00000029543	-	1287	-	ENSCCAP00000012128	428 (aa)	-	A0A2K5Q893

Gene Model

Click here to download ENSCCAG00000023781's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000023781's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000023781	-	94	85.159	ENSCCAG00000037881	SF1	99	86.091

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000023781	-	74	77.101	ENSAPOG00000012341	sf1	59	71.533	Acanthochromis_polyacanthus
ENSCCAG00000023781	-	88	87.665	ENSAMEG00000017828	SF1	83	85.075	Ailuropoda_melanoleuca
ENSCCAG00000023781	-	83	72.606	ENSACIG00000016514	sf1	62	69.712	Amphilophus_citrinellus
ENSCCAG00000023781	-	71	78.378	ENSAOCG00000010934	sf1	59	71.046	Amphiprion_ocellaris
ENSCCAG00000023781	-	71	78.378	ENSAPEG00000009498	sf1	59	71.046	Amphiprion_percula
ENSCCAG00000023781	-	82	71.579	ENSATEG00000001894	sf1	60	70.944	Anabas_testudineus
ENSCCAG00000023781	-	94	85.336	ENSANAG00000026664	-	99	86.331	Aotus_nancymaae
ENSCCAG00000023781	-	92	81.056	ENSANAG00000022607	-	96	79.404	Aotus_nancymaae
ENSCCAG00000023781	-	81	74.255	ENSACLG00000007633	sf1	79	72.070	Astatotilapia_calliptera
ENSCCAG00000023781	-	82	74.599	ENSAMXG00000003630	sf1	53	72.953	Astyanax_mexicanus
ENSCCAG00000023781	-	90	87.879	ENSBTAG00000001035	SF1	100	80.438	Bos_taurus
ENSCCAG00000023781	-	94	85.159	ENSCJAG00000002780	SF1	100	80.438	Callithrix_jacchus
ENSCCAG00000023781	-	94	85.159	ENSCAFG00000014239	SF1	89	85.289	Canis_familiaris
ENSCCAG00000023781	-	94	85.159	ENSCAFG00020014381	SF1	100	80.438	Canis_lupus_dingo
ENSCCAG00000023781	-	90	87.879	ENSCHIG00000025867	SF1	96	85.009	Capra_hircus
ENSCCAG00000023781	-	65	87.500	ENSTSYG00000033618	SF1	84	87.500	Carlito_syrichta
ENSCCAG00000023781	-	82	86.413	ENSCAPG00000010762	SF1	73	86.486	Cavia_aperea
ENSCCAG00000023781	-	92	84.685	ENSCPOG00000012290	SF1	96	84.496	Cavia_porcellus
ENSCCAG00000023781	-	94	85.159	ENSCATG00000011564	SF1	99	86.091	Cercocebus_atys
ENSCCAG00000023781	-	90	87.879	ENSCSAG00000007258	SF1	96	85.009	Chlorocebus_sabaeus
ENSCCAG00000023781	-	80	81.311	ENSCHOG00000006008	SF1	78	81.311	Choloepus_hoffmanni
ENSCCAG00000023781	-	88	78.540	ENSCPBG00000023763	SF1	66	77.756	Chrysemys_picta_bellii
ENSCCAG00000023781	-	68	60.703	ENSCING00000005564	-	65	60.185	Ciona_intestinalis
ENSCCAG00000023781	-	80	53.810	ENSCSAVG00000009055	-	83	50.418	Ciona_savignyi
ENSCCAG00000023781	-	94	85.159	ENSCANG00000042201	SF1	99	85.851	Colobus_angolensis_palliatus
ENSCCAG00000023781	-	90	87.229	ENSCGRG00001003677	Sf1	100	79.969	Cricetulus_griseus_chok1gshd
ENSCCAG00000023781	-	88	87.140	ENSCGRG00000001708	Sf1	95	84.302	Cricetulus_griseus_crigri
ENSCCAG00000023781	-	88	68.238	ENSCSEG00000014375	sf1	57	70.388	Cynoglossus_semilaevis
ENSCCAG00000023781	-	82	74.595	ENSCVAG00000001670	sf1	63	72.139	Cyprinodon_variegatus
ENSCCAG00000023781	-	87	70.352	ENSDARG00000008188	sf1	72	72.182	Danio_rerio
ENSCCAG00000023781	-	90	87.229	ENSDNOG00000001282	SF1	96	84.440	Dasypus_novemcinctus
ENSCCAG00000023781	-	94	85.159	ENSDORG00000016334	Sf1	100	80.438	Dipodomys_ordii
ENSCCAG00000023781	-	92	79.279	ENSETEG00000012830	SF1	78	79.323	Echinops_telfairi
ENSCCAG00000023781	-	82	56.010	ENSEBUG00000012728	sf1	54	55.443	Eptatretus_burgeri
ENSCCAG00000023781	-	90	87.446	ENSEASG00005018272	SF1	96	84.630	Equus_asinus_asinus
ENSCCAG00000023781	-	90	87.662	ENSECAG00000024544	SF1	96	84.820	Equus_caballus
ENSCCAG00000023781	-	72	85.846	ENSEEUG00000001058	SF1	93	86.264	Erinaceus_europaeus
ENSCCAG00000023781	-	70	78.769	ENSELUG00000013225	sf1	54	69.976	Esox_lucius
ENSCCAG00000023781	-	94	85.159	ENSFCAG00000012231	SF1	89	85.289	Felis_catus
ENSCCAG00000023781	-	89	80.124	ENSFDAG00000009833	SF1	73	86.978	Fukomys_damarensis
ENSCCAG00000023781	-	82	71.768	ENSFHEG00000022656	sf1	59	70.560	Fundulus_heteroclitus
ENSCCAG00000023781	-	73	77.126	ENSGMOG00000007469	sf1	74	65.596	Gadus_morhua
ENSCCAG00000023781	-	84	74.286	ENSGAFG00000019284	sf1	78	70.755	Gambusia_affinis
ENSCCAG00000023781	-	86	71.392	ENSGACG00000000826	sf1	73	67.808	Gasterosteus_aculeatus
ENSCCAG00000023781	-	88	77.876	ENSGAGG00000021691	SF1	72	77.756	Gopherus_agassizii
ENSCCAG00000023781	-	82	73.158	ENSHBUG00000011598	sf1	59	71.602	Haplochromis_burtoni
ENSCCAG00000023781	-	94	85.159	ENSHGLG00000009541	SF1	89	85.289	Heterocephalus_glaber_female
ENSCCAG00000023781	-	83	87.354	ENSHGLG00100013879	-	80	84.753	Heterocephalus_glaber_male
ENSCCAG00000023781	-	90	77.311	ENSHGLG00100008255	-	94	77.521	Heterocephalus_glaber_male
ENSCCAG00000023781	-	83	79.391	ENSHGLG00100008076	-	87	81.132	Heterocephalus_glaber_male
ENSCCAG00000023781	-	83	71.204	ENSHCOG00000011388	sf1	58	70.025	Hippocampus_comes
ENSCCAG00000023781	-	92	85.045	ENSSTOG00000009790	-	100	80.255	Ictidomys_tridecemlineatus
ENSCCAG00000023781	-	88	74.558	ENSSTOG00000024353	-	72	75.000	Ictidomys_tridecemlineatus
ENSCCAG00000023781	-	94	84.982	ENSJJAG00000011788	Sf1	100	80.282	Jaculus_jaculus
ENSCCAG00000023781	-	85	71.355	ENSKMAG00000005854	sf1	63	70.238	Kryptolebias_marmoratus
ENSCCAG00000023781	-	83	73.037	ENSLBEG00000019836	sf1	64	71.154	Labrus_bergylta
ENSCCAG00000023781	-	84	69.191	ENSLACG00000018493	SF1	74	69.118	Latimeria_chalumnae
ENSCCAG00000023781	-	83	74.536	ENSLOCG00000002130	sf1	63	72.482	Lepisosteus_oculatus
ENSCCAG00000023781	-	93	84.767	ENSLAFG00000007201	SF1	87	84.902	Loxodonta_africana
ENSCCAG00000023781	-	94	85.159	ENSMFAG00000033122	SF1	99	86.091	Macaca_fascicularis
ENSCCAG00000023781	-	94	85.159	ENSMMUG00000022606	SF1	99	86.732	Macaca_mulatta
ENSCCAG00000023781	-	93	86.091	ENSMNEG00000037901	SF1	99	86.091	Macaca_nemestrina
ENSCCAG00000023781	-	92	85.072	ENSMLEG00000040706	SF1	98	85.749	Mandrillus_leucophaeus
ENSCCAG00000023781	-	82	72.823	ENSMAMG00000001780	sf1	59	71.359	Mastacembelus_armatus
ENSCCAG00000023781	-	82	72.895	ENSMZEG00005009196	sf1	59	71.359	Maylandia_zebra
ENSCCAG00000023781	-	94	84.629	ENSMAUG00000014064	Sf1	89	84.764	Mesocricetus_auratus
ENSCCAG00000023781	-	94	85.159	ENSMICG00000001202	SF1	99	85.646	Microcebus_murinus
ENSCCAG00000023781	-	94	84.452	ENSMOCG00000022038	Sf1	89	84.588	Microtus_ochrogaster
ENSCCAG00000023781	-	82	72.043	ENSMMOG00000020474	sf1	58	71.501	Mola_mola
ENSCCAG00000023781	-	82	85.676	ENSMODG00000029407	SF1	89	85.575	Monodelphis_domestica
ENSCCAG00000023781	-	83	73.387	ENSMALG00000020521	sf1	68	70.803	Monopterus_albus
ENSCCAG00000023781	-	90	87.229	MGP_CAROLIEiJ_G0022607	Sf1	100	88.390	Mus_caroli
ENSCCAG00000023781	-	90	87.229	ENSMUSG00000024949	Sf1	100	88.390	Mus_musculus
ENSCCAG00000023781	-	90	87.229	MGP_PahariEiJ_G0014101	Sf1	100	88.390	Mus_pahari
ENSCCAG00000023781	-	90	87.229	MGP_SPRETEiJ_G0023518	Sf1	100	88.390	Mus_spretus
ENSCCAG00000023781	-	96	79.837	ENSMPUG00000012684	SF1	99	80.190	Mustela_putorius_furo
ENSCCAG00000023781	-	89	84.683	ENSMLUG00000029800	-	90	83.077	Myotis_lucifugus
ENSCCAG00000023781	-	93	82.752	ENSMLUG00000015217	-	99	80.190	Myotis_lucifugus
ENSCCAG00000023781	-	94	84.982	ENSNGAG00000005550	Sf1	89	85.114	Nannospalax_galili
ENSCCAG00000023781	-	81	74.255	ENSNBRG00000017606	sf1	79	71.859	Neolamprologus_brichardi
ENSCCAG00000023781	-	94	84.982	ENSNLEG00000005236	-	99	85.851	Nomascus_leucogenys
ENSCCAG00000023781	-	87	86.517	ENSMEUG00000013424	SF1	96	83.694	Notamacropus_eugenii
ENSCCAG00000023781	-	79	87.255	ENSOPRG00000005008	SF1	96	84.144	Ochotona_princeps
ENSCCAG00000023781	-	94	82.826	ENSODEG00000006102	-	87	81.915	Octodon_degus
ENSCCAG00000023781	-	82	73.158	ENSONIG00000015728	sf1	59	71.602	Oreochromis_niloticus
ENSCCAG00000023781	-	77	75.000	ENSOANG00000002909	SF1	96	76.633	Ornithorhynchus_anatinus
ENSCCAG00000023781	-	93	82.752	ENSOCUG00000026486	SF1	89	85.080	Oryctolagus_cuniculus
ENSCCAG00000023781	-	85	70.077	ENSORLG00000011853	sf1	57	71.033	Oryzias_latipes
ENSCCAG00000023781	-	85	70.077	ENSORLG00020011834	sf1	57	71.033	Oryzias_latipes_hni
ENSCCAG00000023781	-	83	71.129	ENSORLG00015012855	sf1	57	70.529	Oryzias_latipes_hsok
ENSCCAG00000023781	-	83	72.178	ENSOMEG00000005210	sf1	58	72.111	Oryzias_melastigma
ENSCCAG00000023781	-	94	85.159	ENSOGAG00000016196	SF1	90	85.289	Otolemur_garnettii
ENSCCAG00000023781	-	90	87.879	ENSOARG00000009166	SF1	82	88.009	Ovis_aries
ENSCCAG00000023781	-	93	85.663	ENSPPAG00000002799	-	99	85.819	Pan_paniscus
ENSCCAG00000023781	-	92	85.045	ENSPPRG00000013566	SF1	100	79.935	Panthera_pardus
ENSCCAG00000023781	-	83	86.400	ENSPTIG00000016141	SF1	74	86.473	Panthera_tigris_altaica
ENSCCAG00000023781	-	94	85.993	ENSPTRG00000003846	SF1	99	85.851	Pan_troglodytes
ENSCCAG00000023781	-	93	86.091	ENSPANG00000020754	SF1	99	86.091	Papio_anubis
ENSCCAG00000023781	-	71	67.372	ENSPKIG00000012116	sf1	86	68.328	Paramormyrops_kingsleyae
ENSCCAG00000023781	-	67	75.000	ENSPSIG00000003610	SF1	100	69.539	Pelodiscus_sinensis
ENSCCAG00000023781	-	94	84.629	ENSPEMG00000010463	Sf1	89	84.764	Peromyscus_maniculatus_bairdii
ENSCCAG00000023781	-	74	63.690	ENSPMAG00000008272	sf1	54	58.530	Petromyzon_marinus
ENSCCAG00000023781	-	94	84.071	ENSPCIG00000018173	SF1	100	79.467	Phascolarctos_cinereus
ENSCCAG00000023781	-	84	75.989	ENSPFOG00000013683	sf1	68	73.479	Poecilia_formosa
ENSCCAG00000023781	-	82	73.810	ENSPLAG00000018076	sf1	61	71.220	Poecilia_latipinna
ENSCCAG00000023781	-	82	73.810	ENSPMEG00000005726	sf1	62	71.463	Poecilia_mexicana
ENSCCAG00000023781	-	83	72.966	ENSPREG00000004155	sf1	59	70.732	Poecilia_reticulata
ENSCCAG00000023781	-	94	85.159	ENSPPYG00000003098	-	99	84.848	Pongo_abelii
ENSCCAG00000023781	-	88	87.168	ENSPCAG00000013631	SF1	77	84.333	Procavia_capensis
ENSCCAG00000023781	-	94	85.435	ENSPCOG00000027546	SF1	99	85.885	Propithecus_coquereli
ENSCCAG00000023781	-	88	87.168	ENSPVAG00000016938	SF1	78	84.333	Pteropus_vampyrus
ENSCCAG00000023781	-	82	72.895	ENSPNYG00000004673	sf1	59	71.359	Pundamilia_nyererei
ENSCCAG00000023781	-	83	74.074	ENSPNAG00000013072	sf1	59	72.772	Pygocentrus_nattereri
ENSCCAG00000023781	-	90	87.229	ENSRNOG00000021085	Sf1	100	79.812	Rattus_norvegicus
ENSCCAG00000023781	-	90	87.879	ENSRBIG00000042818	SF1	99	82.410	Rhinopithecus_bieti
ENSCCAG00000023781	-	88	87.832	ENSRROG00000045655	SF1	98	85.504	Rhinopithecus_roxellana
ENSCCAG00000023781	-	64	41.118	YLR116W	MSL5	61	41.946	Saccharomyces_cerevisiae
ENSCCAG00000023781	-	100	79.271	ENSSBOG00000022267	-	100	79.271	Saimiri_boliviensis_boliviensis
ENSCCAG00000023781	-	78	80.000	ENSSHAG00000006841	SF1	75	82.134	Sarcophilus_harrisii
ENSCCAG00000023781	-	86	69.388	ENSSFOG00015021978	sf1	56	71.939	Scleropages_formosus
ENSCCAG00000023781	-	83	70.757	ENSSMAG00000007549	sf1	63	69.524	Scophthalmus_maximus
ENSCCAG00000023781	-	71	79.091	ENSSDUG00000003903	sf1	61	72.030	Seriola_dumerili
ENSCCAG00000023781	-	71	79.091	ENSSLDG00000013075	sf1	59	72.030	Seriola_lalandi_dorsalis
ENSCCAG00000023781	-	88	81.069	ENSSARG00000008180	SF1	100	78.835	Sorex_araneus
ENSCCAG00000023781	-	85	74.123	ENSSPUG00000012907	SF1	86	73.386	Sphenodon_punctatus
ENSCCAG00000023781	-	82	72.296	ENSSPAG00000019060	sf1	59	70.803	Stegastes_partitus
ENSCCAG00000023781	-	94	84.982	ENSSSCG00000013021	SF1	96	84.820	Sus_scrofa
ENSCCAG00000023781	-	87	63.457	ENSTNIG00000004820	sf1	80	62.731	Tetraodon_nigroviridis
ENSCCAG00000023781	-	88	82.483	ENSTBEG00000013133	SF1	81	82.675	Tupaia_belangeri
ENSCCAG00000023781	-	88	83.149	ENSTTRG00000008857	SF1	96	80.814	Tursiops_truncatus
ENSCCAG00000023781	-	86	79.707	ENSUAMG00000011977	SF1	100	76.493	Ursus_americanus
ENSCCAG00000023781	-	88	87.885	ENSUMAG00000007268	SF1	88	88.017	Ursus_maritimus
ENSCCAG00000023781	-	71	89.558	ENSVPAG00000011912	SF1	66	89.623	Vicugna_pacos
ENSCCAG00000023781	-	90	87.879	ENSVVUG00000028585	SF1	96	85.009	Vulpes_vulpes
ENSCCAG00000023781	-	89	71.499	ENSXETG00000008434	sf1	71	71.499	Xenopus_tropicalis
ENSCCAG00000023781	-	81	75.068	ENSXCOG00000003704	sf1	75	73.367	Xiphophorus_couchianus
ENSCCAG00000023781	-	82	73.087	ENSXMAG00000007822	sf1	61	71.707	Xiphophorus_maculatus