EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000023986 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 9470 bases
Position: chrKV389725.1:1344962-1354431
Accession: 108285540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000012422	ECR1_N	PF14382.6	8.3e-09	1	1
ENSCCAP00000012415	ECR1_N	PF14382.6	9.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000029841	EXOSC1-202	432	XM_017502840	ENSCCAP00000012422	143 (aa)	XP_017358329	A0A2K5Q953
ENSCCAT00000029834	EXOSC1-201	510	-	ENSCCAP00000012415	169 (aa)	-	A0A2K5Q986

Gene Model

Click here to download ENSCCAG00000023986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000023986's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000023986	EXOSC1	100	62.353	ENSG00000171311	EXOSC1	100	62.353	Homo_sapiens
ENSCCAG00000023986	EXOSC1	98	41.753	ENSAPOG00000007822	exosc1	99	41.753	Acanthochromis_polyacanthus
ENSCCAG00000023986	EXOSC1	100	56.853	ENSAMEG00000000129	EXOSC1	100	56.853	Ailuropoda_melanoleuca
ENSCCAG00000023986	EXOSC1	96	42.105	ENSACIG00000018956	exosc1	92	42.105	Amphilophus_citrinellus
ENSCCAG00000023986	EXOSC1	98	42.487	ENSAOCG00000010699	exosc1	96	45.122	Amphiprion_ocellaris
ENSCCAG00000023986	EXOSC1	91	45.122	ENSAPEG00000012690	exosc1	96	45.122	Amphiprion_percula
ENSCCAG00000023986	EXOSC1	98	42.487	ENSATEG00000018683	exosc1	98	42.487	Anabas_testudineus
ENSCCAG00000023986	EXOSC1	99	48.205	ENSACAG00000002101	EXOSC1	99	48.205	Anolis_carolinensis
ENSCCAG00000023986	EXOSC1	100	62.941	ENSANAG00000034669	EXOSC1	100	62.941	Aotus_nancymaae
ENSCCAG00000023986	EXOSC1	97	43.590	ENSACLG00000021243	exosc1	97	43.590	Astatotilapia_calliptera
ENSCCAG00000023986	EXOSC1	97	45.223	ENSAMXG00000011116	exosc1	97	45.223	Astyanax_mexicanus
ENSCCAG00000023986	EXOSC1	100	56.345	ENSBTAG00000012699	EXOSC1	100	56.345	Bos_taurus
ENSCCAG00000023986	EXOSC1	100	62.353	ENSCJAG00000016586	EXOSC1	100	62.353	Callithrix_jacchus
ENSCCAG00000023986	EXOSC1	100	56.853	ENSCAFG00000009068	EXOSC1	94	56.853	Canis_familiaris
ENSCCAG00000023986	EXOSC1	100	56.853	ENSCAFG00020006002	EXOSC1	94	56.853	Canis_lupus_dingo
ENSCCAG00000023986	EXOSC1	100	56.345	ENSCHIG00000015253	EXOSC1	100	56.345	Capra_hircus
ENSCCAG00000023986	EXOSC1	100	61.765	ENSTSYG00000000760	EXOSC1	100	61.765	Carlito_syrichta
ENSCCAG00000023986	EXOSC1	100	59.006	ENSCPOG00000001173	EXOSC1	100	59.006	Cavia_porcellus
ENSCCAG00000023986	EXOSC1	100	62.353	ENSCATG00000034114	EXOSC1	100	62.353	Cercocebus_atys
ENSCCAG00000023986	EXOSC1	100	59.627	ENSCLAG00000002463	EXOSC1	100	59.627	Chinchilla_lanigera
ENSCCAG00000023986	EXOSC1	100	57.360	ENSCSAG00000005870	EXOSC1	100	57.360	Chlorocebus_sabaeus
ENSCCAG00000023986	EXOSC1	95	50.000	ENSCHOG00000006477	EXOSC1	100	50.267	Choloepus_hoffmanni
ENSCCAG00000023986	EXOSC1	64	46.364	ENSCPBG00000011949	EXOSC1	89	46.364	Chrysemys_picta_bellii
ENSCCAG00000023986	EXOSC1	95	32.828	ENSCING00000022734	-	89	32.828	Ciona_intestinalis
ENSCCAG00000023986	EXOSC1	95	32.632	ENSCSAVG00000010865	-	95	32.632	Ciona_savignyi
ENSCCAG00000023986	EXOSC1	100	62.353	ENSCANG00000034159	EXOSC1	100	62.353	Colobus_angolensis_palliatus
ENSCCAG00000023986	EXOSC1	100	59.627	ENSCGRG00001000335	Exosc1	100	59.627	Cricetulus_griseus_chok1gshd
ENSCCAG00000023986	EXOSC1	100	59.627	ENSCGRG00000011602	Exosc1	100	59.627	Cricetulus_griseus_crigri
ENSCCAG00000023986	EXOSC1	97	45.181	ENSCSEG00000007895	exosc1	95	45.181	Cynoglossus_semilaevis
ENSCCAG00000023986	EXOSC1	98	41.808	ENSCVAG00000016748	exosc1	98	41.808	Cyprinodon_variegatus
ENSCCAG00000023986	EXOSC1	98	43.005	ENSDARG00000059841	exosc1	98	43.005	Danio_rerio
ENSCCAG00000023986	EXOSC1	69	59.664	ENSDNOG00000007983	EXOSC1	79	59.664	Dasypus_novemcinctus
ENSCCAG00000023986	EXOSC1	100	58.385	ENSDORG00000016528	Exosc1	100	58.385	Dipodomys_ordii
ENSCCAG00000023986	EXOSC1	92	30.688	FBgn0032346	Csl4	92	30.688	Drosophila_melanogaster
ENSCCAG00000023986	EXOSC1	100	55.330	ENSETEG00000002469	-	100	55.330	Echinops_telfairi
ENSCCAG00000023986	EXOSC1	97	39.691	ENSEBUG00000008164	exosc1	97	39.691	Eptatretus_burgeri
ENSCCAG00000023986	EXOSC1	100	56.915	ENSEASG00005008684	EXOSC1	100	56.915	Equus_asinus_asinus
ENSCCAG00000023986	EXOSC1	70	57.851	ENSECAG00000010621	EXOSC1	71	58.929	Equus_caballus
ENSCCAG00000023986	EXOSC1	100	56.345	ENSEEUG00000005647	EXOSC1	100	56.345	Erinaceus_europaeus
ENSCCAG00000023986	EXOSC1	97	41.212	ENSELUG00000017369	exosc1	97	41.212	Esox_lucius
ENSCCAG00000023986	EXOSC1	100	62.353	ENSFCAG00000040563	EXOSC1	100	62.353	Felis_catus
ENSCCAG00000023986	EXOSC1	100	48.223	ENSFALG00000008450	EXOSC1	100	48.223	Ficedula_albicollis
ENSCCAG00000023986	EXOSC1	100	56.345	ENSFDAG00000000846	EXOSC1	100	56.345	Fukomys_damarensis
ENSCCAG00000023986	EXOSC1	98	38.660	ENSFHEG00000009154	exosc1	99	38.660	Fundulus_heteroclitus
ENSCCAG00000023986	EXOSC1	98	42.487	ENSGMOG00000008993	exosc1	98	42.487	Gadus_morhua
ENSCCAG00000023986	EXOSC1	100	51.176	ENSGALG00000039917	EXOSC1	100	51.176	Gallus_gallus
ENSCCAG00000023986	EXOSC1	97	42.771	ENSGAFG00000010265	exosc1	93	42.771	Gambusia_affinis
ENSCCAG00000023986	EXOSC1	98	43.523	ENSGACG00000018936	exosc1	98	43.523	Gasterosteus_aculeatus
ENSCCAG00000023986	EXOSC1	100	46.701	ENSGAGG00000019192	EXOSC1	100	46.701	Gopherus_agassizii
ENSCCAG00000023986	EXOSC1	100	62.733	ENSGGOG00000003099	EXOSC1	100	62.733	Gorilla_gorilla
ENSCCAG00000023986	EXOSC1	98	42.487	ENSHBUG00000017857	exosc1	98	42.487	Haplochromis_burtoni
ENSCCAG00000023986	EXOSC1	100	59.627	ENSHGLG00000016927	EXOSC1	100	59.627	Heterocephalus_glaber_female
ENSCCAG00000023986	EXOSC1	100	59.627	ENSHGLG00100012208	EXOSC1	100	59.627	Heterocephalus_glaber_male
ENSCCAG00000023986	EXOSC1	98	41.969	ENSHCOG00000019882	exosc1	98	41.969	Hippocampus_comes
ENSCCAG00000023986	EXOSC1	98	44.304	ENSIPUG00000007685	exosc1	98	44.304	Ictalurus_punctatus
ENSCCAG00000023986	EXOSC1	70	52.101	ENSSTOG00000029860	-	89	52.101	Ictidomys_tridecemlineatus
ENSCCAG00000023986	EXOSC1	100	59.627	ENSSTOG00000006615	EXOSC1	100	59.627	Ictidomys_tridecemlineatus
ENSCCAG00000023986	EXOSC1	100	56.345	ENSJJAG00000013311	Exosc1	100	56.345	Jaculus_jaculus
ENSCCAG00000023986	EXOSC1	97	44.048	ENSKMAG00000001202	exosc1	80	44.048	Kryptolebias_marmoratus
ENSCCAG00000023986	EXOSC1	98	41.969	ENSLBEG00000011448	exosc1	98	41.969	Labrus_bergylta
ENSCCAG00000023986	EXOSC1	98	42.262	ENSLOCG00000003776	exosc1	99	42.262	Lepisosteus_oculatus
ENSCCAG00000023986	EXOSC1	100	56.345	ENSLAFG00000015983	EXOSC1	100	56.345	Loxodonta_africana
ENSCCAG00000023986	EXOSC1	100	62.353	ENSMFAG00000001493	EXOSC1	100	62.353	Macaca_fascicularis
ENSCCAG00000023986	EXOSC1	100	62.353	ENSMMUG00000020028	EXOSC1	100	62.353	Macaca_mulatta
ENSCCAG00000023986	EXOSC1	100	62.353	ENSMNEG00000029816	EXOSC1	100	62.353	Macaca_nemestrina
ENSCCAG00000023986	EXOSC1	100	60.870	ENSMLEG00000027643	EXOSC1	100	60.870	Mandrillus_leucophaeus
ENSCCAG00000023986	EXOSC1	98	41.753	ENSMAMG00000012200	exosc1	99	41.753	Mastacembelus_armatus
ENSCCAG00000023986	EXOSC1	97	43.590	ENSMZEG00005007042	exosc1	97	43.590	Maylandia_zebra
ENSCCAG00000023986	EXOSC1	100	61.176	ENSMAUG00000020462	-	100	61.176	Mesocricetus_auratus
ENSCCAG00000023986	EXOSC1	100	61.176	ENSMICG00000007664	EXOSC1	100	61.176	Microcebus_murinus
ENSCCAG00000023986	EXOSC1	96	49.457	ENSMOCG00000017124	-	97	49.457	Microtus_ochrogaster
ENSCCAG00000023986	EXOSC1	100	59.627	ENSMOCG00000006004	-	100	59.627	Microtus_ochrogaster
ENSCCAG00000023986	EXOSC1	99	42.500	ENSMMOG00000021403	exosc1	99	42.500	Mola_mola
ENSCCAG00000023986	EXOSC1	100	51.515	ENSMODG00000004213	EXOSC1	100	51.515	Monodelphis_domestica
ENSCCAG00000023986	EXOSC1	94	41.176	ENSMALG00000007061	exosc1	93	41.176	Monopterus_albus
ENSCCAG00000023986	EXOSC1	100	60.248	MGP_CAROLIEiJ_G0022959	Exosc1	100	60.248	Mus_caroli
ENSCCAG00000023986	EXOSC1	100	60.870	ENSMUSG00000034321	Exosc1	100	60.870	Mus_musculus
ENSCCAG00000023986	EXOSC1	100	59.627	MGP_PahariEiJ_G0014449	Exosc1	100	59.627	Mus_pahari
ENSCCAG00000023986	EXOSC1	100	60.248	MGP_SPRETEiJ_G0023880	Exosc1	100	60.248	Mus_spretus
ENSCCAG00000023986	EXOSC1	100	56.853	ENSMPUG00000017044	EXOSC1	100	56.853	Mustela_putorius_furo
ENSCCAG00000023986	EXOSC1	100	56.853	ENSMLUG00000009228	EXOSC1	100	56.853	Myotis_lucifugus
ENSCCAG00000023986	EXOSC1	100	54.822	ENSNGAG00000022033	Exosc1	100	54.822	Nannospalax_galili
ENSCCAG00000023986	EXOSC1	97	43.312	ENSNBRG00000024007	exosc1	97	43.312	Neolamprologus_brichardi
ENSCCAG00000023986	EXOSC1	100	61.765	ENSNLEG00000013872	EXOSC1	100	61.765	Nomascus_leucogenys
ENSCCAG00000023986	EXOSC1	69	53.846	ENSMEUG00000002246	EXOSC1	100	53.846	Notamacropus_eugenii
ENSCCAG00000023986	EXOSC1	100	54.822	ENSOPRG00000005065	EXOSC1	100	54.822	Ochotona_princeps
ENSCCAG00000023986	EXOSC1	100	59.006	ENSODEG00000016709	EXOSC1	100	59.006	Octodon_degus
ENSCCAG00000023986	EXOSC1	98	42.487	ENSONIG00000017683	exosc1	98	42.487	Oreochromis_niloticus
ENSCCAG00000023986	EXOSC1	57	52.128	ENSOANG00000006563	EXOSC1	85	47.706	Ornithorhynchus_anatinus
ENSCCAG00000023986	EXOSC1	100	52.284	ENSOCUG00000026461	-	100	52.284	Oryctolagus_cuniculus
ENSCCAG00000023986	EXOSC1	100	56.061	ENSOCUG00000011898	-	100	56.061	Oryctolagus_cuniculus
ENSCCAG00000023986	EXOSC1	98	41.753	ENSORLG00000011595	exosc1	98	41.753	Oryzias_latipes
ENSCCAG00000023986	EXOSC1	98	41.753	ENSORLG00020005831	exosc1	98	41.753	Oryzias_latipes_hni
ENSCCAG00000023986	EXOSC1	98	41.753	ENSORLG00015004317	exosc1	98	41.753	Oryzias_latipes_hsok
ENSCCAG00000023986	EXOSC1	98	37.968	ENSOMEG00000013907	exosc1	98	38.333	Oryzias_melastigma
ENSCCAG00000023986	EXOSC1	100	55.838	ENSOGAG00000016259	EXOSC1	100	55.838	Otolemur_garnettii
ENSCCAG00000023986	EXOSC1	100	56.345	ENSOARG00000010136	EXOSC1	100	56.345	Ovis_aries
ENSCCAG00000023986	EXOSC1	100	60.870	ENSPPAG00000039842	EXOSC1	100	60.870	Pan_paniscus
ENSCCAG00000023986	EXOSC1	100	62.353	ENSPPRG00000023366	EXOSC1	100	62.353	Panthera_pardus
ENSCCAG00000023986	EXOSC1	100	62.353	ENSPTIG00000017701	EXOSC1	100	62.353	Panthera_tigris_altaica
ENSCCAG00000023986	EXOSC1	100	62.353	ENSPTRG00000002808	EXOSC1	100	62.353	Pan_troglodytes
ENSCCAG00000023986	EXOSC1	100	62.353	ENSPANG00000021324	EXOSC1	100	62.353	Papio_anubis
ENSCCAG00000023986	EXOSC1	97	46.405	ENSPKIG00000016037	exosc1	97	46.405	Paramormyrops_kingsleyae
ENSCCAG00000023986	EXOSC1	97	44.578	ENSPMGG00000014002	exosc1	98	44.578	Periophthalmus_magnuspinnatus
ENSCCAG00000023986	EXOSC1	100	59.627	ENSPEMG00000010710	-	100	59.627	Peromyscus_maniculatus_bairdii
ENSCCAG00000023986	EXOSC1	95	43.617	ENSPMAG00000000195	exosc1	95	43.617	Petromyzon_marinus
ENSCCAG00000023986	EXOSC1	100	52.792	ENSPCIG00000002210	EXOSC1	99	52.792	Phascolarctos_cinereus
ENSCCAG00000023986	EXOSC1	98	39.175	ENSPFOG00000006755	exosc1	94	39.175	Poecilia_formosa
ENSCCAG00000023986	EXOSC1	98	39.175	ENSPLAG00000005880	exosc1	99	39.175	Poecilia_latipinna
ENSCCAG00000023986	EXOSC1	97	42.169	ENSPMEG00000015598	exosc1	93	42.169	Poecilia_mexicana
ENSCCAG00000023986	EXOSC1	97	42.169	ENSPREG00000000405	exosc1	93	42.169	Poecilia_reticulata
ENSCCAG00000023986	EXOSC1	100	56.345	ENSPPYG00000002531	EXOSC1	100	56.345	Pongo_abelii
ENSCCAG00000023986	EXOSC1	100	55.838	ENSPCAG00000009135	EXOSC1	100	55.838	Procavia_capensis
ENSCCAG00000023986	EXOSC1	100	59.494	ENSPCOG00000027539	EXOSC1	100	59.494	Propithecus_coquereli
ENSCCAG00000023986	EXOSC1	100	56.345	ENSPVAG00000003372	EXOSC1	100	56.345	Pteropus_vampyrus
ENSCCAG00000023986	EXOSC1	97	45.783	ENSPNYG00000021745	exosc1	98	45.783	Pundamilia_nyererei
ENSCCAG00000023986	EXOSC1	99	47.024	ENSPNAG00000001944	exosc1	99	47.024	Pygocentrus_nattereri
ENSCCAG00000023986	EXOSC1	100	59.627	ENSRNOG00000048708	Exosc1	100	59.627	Rattus_norvegicus
ENSCCAG00000023986	EXOSC1	100	62.353	ENSRBIG00000035618	EXOSC1	100	62.353	Rhinopithecus_bieti
ENSCCAG00000023986	EXOSC1	100	62.353	ENSRROG00000032589	EXOSC1	100	62.353	Rhinopithecus_roxellana
ENSCCAG00000023986	EXOSC1	100	62.941	ENSSBOG00000000359	EXOSC1	100	62.941	Saimiri_boliviensis_boliviensis
ENSCCAG00000023986	EXOSC1	69	42.759	ENSSHAG00000018219	EXOSC1	97	42.759	Sarcophilus_harrisii
ENSCCAG00000023986	EXOSC1	98	42.784	ENSSFOG00015009069	exosc1	99	42.784	Scleropages_formosus
ENSCCAG00000023986	EXOSC1	97	45.509	ENSSFOG00015016289	-	98	45.509	Scleropages_formosus
ENSCCAG00000023986	EXOSC1	98	43.005	ENSSMAG00000003721	exosc1	98	43.005	Scophthalmus_maximus
ENSCCAG00000023986	EXOSC1	98	46.023	ENSSDUG00000002993	exosc1	98	46.023	Seriola_dumerili
ENSCCAG00000023986	EXOSC1	98	46.023	ENSSLDG00000025181	exosc1	98	46.023	Seriola_lalandi_dorsalis
ENSCCAG00000023986	EXOSC1	100	53.333	ENSSARG00000000162	EXOSC1	100	53.333	Sorex_araneus
ENSCCAG00000023986	EXOSC1	99	46.939	ENSSPUG00000012263	EXOSC1	99	46.939	Sphenodon_punctatus
ENSCCAG00000023986	EXOSC1	98	45.198	ENSSPAG00000016792	exosc1	82	45.198	Stegastes_partitus
ENSCCAG00000023986	EXOSC1	100	56.853	ENSSSCG00000010518	EXOSC1	91	56.853	Sus_scrofa
ENSCCAG00000023986	EXOSC1	98	45.876	ENSTGUG00000009692	EXOSC1	99	45.876	Taeniopygia_guttata
ENSCCAG00000023986	EXOSC1	94	42.353	ENSTRUG00000007706	exosc1	98	39.062	Takifugu_rubripes
ENSCCAG00000023986	EXOSC1	97	38.974	ENSTNIG00000014079	exosc1	97	39.062	Tetraodon_nigroviridis
ENSCCAG00000023986	EXOSC1	100	52.062	ENSTBEG00000006011	EXOSC1	100	52.062	Tupaia_belangeri
ENSCCAG00000023986	EXOSC1	93	54.301	ENSTTRG00000009887	EXOSC1	100	54.301	Tursiops_truncatus
ENSCCAG00000023986	EXOSC1	100	59.355	ENSUAMG00000010266	EXOSC1	100	59.355	Ursus_americanus
ENSCCAG00000023986	EXOSC1	100	59.740	ENSUMAG00000022002	EXOSC1	100	59.740	Ursus_maritimus
ENSCCAG00000023986	EXOSC1	100	56.853	ENSVVUG00000023192	EXOSC1	63	56.853	Vulpes_vulpes
ENSCCAG00000023986	EXOSC1	98	44.330	ENSXETG00000003434	exosc1	99	44.330	Xenopus_tropicalis
ENSCCAG00000023986	EXOSC1	57	45.161	ENSXCOG00000014499	exosc1	90	39.496	Xiphophorus_couchianus
ENSCCAG00000023986	EXOSC1	97	42.771	ENSXMAG00000023382	exosc1	93	42.771	Xiphophorus_maculatus