EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000024171 (Gene tree)
Gene ID: 108312679
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase DDX53
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 1986 bases
Position: chrKV389554.1:5396734-5398719
Accession: 108312679
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000012745	KH_1	PF00013.29	1e-10	1	1
ENSCCAP00000012745	DEAD	PF00270.29	2.1e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000030165	-	1887	XM_017540699	ENSCCAP00000012745	628 (aa)	XP_017396188	A0A2K5PV94

Gene Model

Click here to download ENSCCAG00000024171's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000024171's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000024171	-	56	31.281	ENSCCAG00000025989	DDX31	54	31.281
ENSCCAG00000024171	-	64	33.333	ENSCCAG00000026682	DDX59	65	33.333
ENSCCAG00000024171	-	69	38.303	ENSCCAG00000020612	DDX42	60	38.303
ENSCCAG00000024171	-	100	100.000	ENSCCAG00000021534	-	100	100.000
ENSCCAG00000024171	-	55	34.551	ENSCCAG00000023595	-	63	34.551
ENSCCAG00000024171	-	60	39.948	ENSCCAG00000028725	DDX4	56	39.948
ENSCCAG00000024171	-	55	33.333	ENSCCAG00000029117	-	92	33.333
ENSCCAG00000024171	-	61	36.935	ENSCCAG00000036188	DDX41	62	37.245
ENSCCAG00000024171	-	52	32.317	ENSCCAG00000035301	-	84	32.317
ENSCCAG00000024171	-	56	34.795	ENSCCAG00000030543	DDX50	53	34.795
ENSCCAG00000024171	-	70	43.049	ENSCCAG00000037932	DDX5	77	43.049
ENSCCAG00000024171	-	62	39.659	ENSCCAG00000023934	DDX3X	63	39.803
ENSCCAG00000024171	-	56	34.463	ENSCCAG00000036144	EIF4A3	84	34.463
ENSCCAG00000024171	-	54	31.856	ENSCCAG00000021652	DDX55	61	32.133
ENSCCAG00000024171	-	56	33.807	ENSCCAG00000036268	-	85	33.807
ENSCCAG00000024171	-	61	38.903	ENSCCAG00000000872	-	63	38.903
ENSCCAG00000024171	-	58	35.013	ENSCCAG00000026288	DDX21	88	34.591
ENSCCAG00000024171	-	57	35.890	ENSCCAG00000036092	DDX49	74	35.890
ENSCCAG00000024171	-	54	31.714	ENSCCAG00000018129	-	58	31.624
ENSCCAG00000024171	-	63	36.272	ENSCCAG00000025717	DDX47	85	36.272
ENSCCAG00000024171	-	61	38.653	ENSCCAG00000036904	-	66	38.653
ENSCCAG00000024171	-	99	54.400	ENSCCAG00000037349	DDX43	89	55.290
ENSCCAG00000024171	-	71	42.729	ENSCCAG00000024116	DDX17	89	42.400
ENSCCAG00000024171	-	61	33.418	ENSCCAG00000023213	DDX52	68	33.095
ENSCCAG00000024171	-	57	30.163	ENSCCAG00000027629	DDX25	76	31.875
ENSCCAG00000024171	-	56	32.113	ENSCCAG00000021636	-	71	32.113

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000024171	-	100	82.006	ENSG00000184735	DDX53	99	82.006	Homo_sapiens
ENSCCAG00000024171	-	100	80.573	ENSCSAG00000019540	DDX53	99	80.573	Chlorocebus_sabaeus
ENSCCAG00000024171	-	100	80.892	ENSPPAG00000006869	DDX53	99	80.892	Pan_paniscus
ENSCCAG00000024171	-	100	80.573	ENSPTRG00000028313	DDX53	99	80.573	Pan_troglodytes
ENSCCAG00000024171	-	100	82.325	ENSPPYG00000020185	DDX53	99	82.325	Pongo_abelii