EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000024231 (Gene tree)
Gene ID: 108293712
Gene Symbol: SNRPN
Alias: HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN
Full Name: small nuclear ribonucleoprotein polypeptide N
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 20460 bases
Position: chrKV389970.1:1160696-1181155
Accession: 108293712
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000012896	LSM	PF01423.22	1e-19	1	1
ENSCCAP00000012919	LSM	PF01423.22	1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000030320	SNRPN-201	1427	XM_017515236	ENSCCAP00000012896	240 (aa)	XP_017370725	A0A2K5QAH6
ENSCCAT00000030342	SNRPN-202	735	-	ENSCCAP00000012919	244 (aa)	-	A0A2K5QAL9

Gene Model

Click here to download ENSCCAG00000024231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000024231's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000024231	SNRPN	92	92.760	ENSCCAG00000026002	SNRPB	96	92.760
ENSCCAG00000024231	SNRPN	53	84.252	ENSCCAG00000035140	-	89	86.275

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000024231	SNRPN	100	100.000	ENSG00000128739	SNRPN	100	100.000	Homo_sapiens
ENSCCAG00000024231	SNRPN	99	99.582	ENSAMEG00000007034	SNRPN	98	99.583	Ailuropoda_melanoleuca
ENSCCAG00000024231	SNRPN	100	100.000	ENSANAG00000034241	SNRPN	100	100.000	Aotus_nancymaae
ENSCCAG00000024231	SNRPN	100	98.750	ENSBTAG00000008251	SNRPN	100	98.750	Bos_taurus
ENSCCAG00000024231	SNRPN	95	99.561	ENSCJAG00000042622	-	95	99.561	Callithrix_jacchus
ENSCCAG00000024231	SNRPN	100	100.000	ENSCJAG00000003759	-	100	100.000	Callithrix_jacchus
ENSCCAG00000024231	SNRPN	100	99.583	ENSCAFG00000010127	SNRPN	100	99.583	Canis_familiaris
ENSCCAG00000024231	SNRPN	100	99.583	ENSCAFG00020024075	SNRPN	100	99.583	Canis_lupus_dingo
ENSCCAG00000024231	SNRPN	100	98.750	ENSCHIG00000017477	SNRPN	100	98.750	Capra_hircus
ENSCCAG00000024231	SNRPN	100	100.000	ENSTSYG00000005248	SNRPN	100	100.000	Carlito_syrichta
ENSCCAG00000024231	SNRPN	100	100.000	ENSCAPG00000003047	SNRPN	100	100.000	Cavia_aperea
ENSCCAG00000024231	SNRPN	100	100.000	ENSCPOG00000020270	SNRPN	100	100.000	Cavia_porcellus
ENSCCAG00000024231	SNRPN	100	100.000	ENSCATG00000032518	SNRPN	100	100.000	Cercocebus_atys
ENSCCAG00000024231	SNRPN	100	100.000	ENSCLAG00000011376	SNRPN	100	100.000	Chinchilla_lanigera
ENSCCAG00000024231	SNRPN	100	100.000	ENSCSAG00000006406	SNRPN	100	100.000	Chlorocebus_sabaeus
ENSCCAG00000024231	SNRPN	98	98.718	ENSCHOG00000001846	SNRPN	88	98.718	Choloepus_hoffmanni
ENSCCAG00000024231	SNRPN	100	100.000	ENSCANG00000041156	SNRPN	100	100.000	Colobus_angolensis_palliatus
ENSCCAG00000024231	SNRPN	100	99.583	ENSCGRG00001004136	Snrpn	100	99.583	Cricetulus_griseus_chok1gshd
ENSCCAG00000024231	SNRPN	100	99.167	ENSCGRG00000001621	Snrpn	100	99.167	Cricetulus_griseus_crigri
ENSCCAG00000024231	SNRPN	72	92.486	ENSCVAG00000014193	SNRPN	69	92.857	Cyprinodon_variegatus
ENSCCAG00000024231	SNRPN	100	98.361	ENSDNOG00000037060	SNRPN	100	98.361	Dasypus_novemcinctus
ENSCCAG00000024231	SNRPN	100	99.583	ENSDORG00000004527	Snrpn	100	99.583	Dipodomys_ordii
ENSCCAG00000024231	SNRPN	100	99.583	ENSEASG00005017871	SNRPN	100	99.583	Equus_asinus_asinus
ENSCCAG00000024231	SNRPN	100	99.583	ENSECAG00000018148	SNRPN	100	99.583	Equus_caballus
ENSCCAG00000024231	SNRPN	99	98.745	ENSEEUG00000007440	-	100	98.745	Erinaceus_europaeus
ENSCCAG00000024231	SNRPN	100	99.583	ENSFCAG00000022298	-	100	99.583	Felis_catus
ENSCCAG00000024231	SNRPN	76	85.792	ENSFDAG00000010528	-	86	85.792	Fukomys_damarensis
ENSCCAG00000024231	SNRPN	100	99.583	ENSFDAG00000016578	-	100	99.583	Fukomys_damarensis
ENSCCAG00000024231	SNRPN	74	76.836	ENSGMOG00000018161	SNRPN	74	76.190	Gadus_morhua
ENSCCAG00000024231	SNRPN	90	73.488	ENSGGOG00000024469	-	69	83.942	Gorilla_gorilla
ENSCCAG00000024231	SNRPN	100	100.000	ENSGGOG00000003988	SNRPN	100	100.000	Gorilla_gorilla
ENSCCAG00000024231	SNRPN	89	91.549	ENSHGLG00000019812	-	89	91.080	Heterocephalus_glaber_female
ENSCCAG00000024231	SNRPN	90	80.930	ENSHGLG00000020936	-	88	79.812	Heterocephalus_glaber_female
ENSCCAG00000024231	SNRPN	100	85.417	ENSHGLG00000002327	-	88	84.977	Heterocephalus_glaber_female
ENSCCAG00000024231	SNRPN	100	100.000	ENSHGLG00000011924	SNRPN	100	100.000	Heterocephalus_glaber_female
ENSCCAG00000024231	SNRPN	89	91.549	ENSHGLG00100021056	-	89	91.080	Heterocephalus_glaber_male
ENSCCAG00000024231	SNRPN	100	82.917	ENSHGLG00100004881	-	88	83.099	Heterocephalus_glaber_male
ENSCCAG00000024231	SNRPN	100	100.000	ENSHGLG00100016559	SNRPN	100	100.000	Heterocephalus_glaber_male
ENSCCAG00000024231	SNRPN	100	100.000	ENSSTOG00000001339	SNRPN	100	100.000	Ictidomys_tridecemlineatus
ENSCCAG00000024231	SNRPN	99	99.582	ENSLAFG00000009458	SNRPN	100	99.583	Loxodonta_africana
ENSCCAG00000024231	SNRPN	100	100.000	ENSMFAG00000042235	SNRPN	100	100.000	Macaca_fascicularis
ENSCCAG00000024231	SNRPN	100	100.000	ENSMMUG00000023139	SNURF	100	100.000	Macaca_mulatta
ENSCCAG00000024231	SNRPN	100	100.000	ENSMNEG00000031291	SNRPN	100	100.000	Macaca_nemestrina
ENSCCAG00000024231	SNRPN	100	100.000	ENSMLEG00000038837	SNRPN	100	100.000	Mandrillus_leucophaeus
ENSCCAG00000024231	SNRPN	92	85.909	ENSMGAG00000008696	SNRPN	92	85.909	Meleagris_gallopavo
ENSCCAG00000024231	SNRPN	100	100.000	ENSMAUG00000000051	Snrpn	100	100.000	Mesocricetus_auratus
ENSCCAG00000024231	SNRPN	100	100.000	ENSMICG00000042356	SNRPN	100	100.000	Microcebus_murinus
ENSCCAG00000024231	SNRPN	100	100.000	ENSMOCG00000015350	Snrpn	100	100.000	Microtus_ochrogaster
ENSCCAG00000024231	SNRPN	92	94.118	ENSMODG00000013926	-	92	94.118	Monodelphis_domestica
ENSCCAG00000024231	SNRPN	100	100.000	MGP_CAROLIEiJ_G0029815	Snrpn	100	100.000	Mus_caroli
ENSCCAG00000024231	SNRPN	100	100.000	ENSMUSG00000102252	Snrpn	100	100.000	Mus_musculus
ENSCCAG00000024231	SNRPN	100	100.000	MGP_PahariEiJ_G0013040	Snrpn	100	100.000	Mus_pahari
ENSCCAG00000024231	SNRPN	100	100.000	MGP_SPRETEiJ_G0030918	Snrpn	100	100.000	Mus_spretus
ENSCCAG00000024231	SNRPN	88	51.659	ENSMPUG00000007115	-	64	70.423	Mustela_putorius_furo
ENSCCAG00000024231	SNRPN	100	99.583	ENSMPUG00000014638	-	100	99.583	Mustela_putorius_furo
ENSCCAG00000024231	SNRPN	99	99.163	ENSMLUG00000023361	-	98	99.163	Myotis_lucifugus
ENSCCAG00000024231	SNRPN	95	62.281	ENSMLUG00000024428	-	62	71.111	Myotis_lucifugus
ENSCCAG00000024231	SNRPN	85	60.784	ENSMLUG00000025849	-	73	63.057	Myotis_lucifugus
ENSCCAG00000024231	SNRPN	100	100.000	ENSNGAG00000000181	Snrpn	100	100.000	Nannospalax_galili
ENSCCAG00000024231	SNRPN	100	83.750	ENSNLEG00000001376	SNRPN	99	83.750	Nomascus_leucogenys
ENSCCAG00000024231	SNRPN	98	81.197	ENSODEG00000016065	-	87	86.473	Octodon_degus
ENSCCAG00000024231	SNRPN	100	99.167	ENSODEG00000020110	-	100	99.167	Octodon_degus
ENSCCAG00000024231	SNRPN	100	95.833	ENSODEG00000019708	-	95	99.559	Octodon_degus
ENSCCAG00000024231	SNRPN	100	99.583	ENSODEG00000013478	-	100	99.583	Octodon_degus
ENSCCAG00000024231	SNRPN	100	99.585	ENSOCUG00000003532	-	100	99.585	Oryctolagus_cuniculus
ENSCCAG00000024231	SNRPN	74	92.090	ENSORLG00020007490	SNRPN	69	93.452	Oryzias_latipes_hni
ENSCCAG00000024231	SNRPN	74	92.090	ENSORLG00015003332	SNRPN	69	93.452	Oryzias_latipes_hsok
ENSCCAG00000024231	SNRPN	74	92.655	ENSOMEG00000002066	SNRPN	69	94.048	Oryzias_melastigma
ENSCCAG00000024231	SNRPN	100	100.000	ENSOGAG00000007392	SNRPN	100	100.000	Otolemur_garnettii
ENSCCAG00000024231	SNRPN	100	98.750	ENSOARG00000009080	SNRPN	100	98.750	Ovis_aries
ENSCCAG00000024231	SNRPN	100	100.000	ENSPPAG00000027650	SNRPN	100	100.000	Pan_paniscus
ENSCCAG00000024231	SNRPN	97	69.231	ENSPPAG00000034049	-	65	79.720	Pan_paniscus
ENSCCAG00000024231	SNRPN	85	64.390	ENSPPRG00000006957	-	73	70.861	Panthera_pardus
ENSCCAG00000024231	SNRPN	100	99.583	ENSPPRG00000019878	-	100	99.583	Panthera_pardus
ENSCCAG00000024231	SNRPN	100	99.167	ENSPTIG00000004537	SNRPN	100	99.167	Panthera_tigris_altaica
ENSCCAG00000024231	SNRPN	97	69.658	ENSPTRG00000052400	-	65	80.420	Pan_troglodytes
ENSCCAG00000024231	SNRPN	100	100.000	ENSPTRG00000006826	SNRPN	100	100.000	Pan_troglodytes
ENSCCAG00000024231	SNRPN	100	100.000	ENSPANG00000020142	SNRPN	100	100.000	Papio_anubis
ENSCCAG00000024231	SNRPN	100	89.583	ENSPEMG00000013920	-	100	89.583	Peromyscus_maniculatus_bairdii
ENSCCAG00000024231	SNRPN	100	100.000	ENSPEMG00000012911	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSCCAG00000024231	SNRPN	89	95.794	ENSPEMG00000020979	-	89	95.775	Peromyscus_maniculatus_bairdii
ENSCCAG00000024231	SNRPN	76	97.253	ENSPCIG00000004699	-	68	94.836	Phascolarctos_cinereus
ENSCCAG00000024231	SNRPN	72	93.642	ENSPMEG00000020674	SNRPN	69	93.452	Poecilia_mexicana
ENSCCAG00000024231	SNRPN	100	100.000	ENSPPYG00000006269	SNURF	100	100.000	Pongo_abelii
ENSCCAG00000024231	SNRPN	100	100.000	ENSPCOG00000014231	SNRPN	100	100.000	Propithecus_coquereli
ENSCCAG00000024231	SNRPN	100	100.000	ENSRNOG00000059764	Snrpn	100	100.000	Rattus_norvegicus
ENSCCAG00000024231	SNRPN	100	100.000	ENSRBIG00000041765	SNRPN	100	100.000	Rhinopithecus_bieti
ENSCCAG00000024231	SNRPN	100	100.000	ENSRROG00000035157	SNRPN	100	100.000	Rhinopithecus_roxellana
ENSCCAG00000024231	SNRPN	100	100.000	ENSSBOG00000000110	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSCCAG00000024231	SNRPN	100	98.750	ENSSBOG00000024929	-	100	98.750	Saimiri_boliviensis_boliviensis
ENSCCAG00000024231	SNRPN	76	96.721	ENSSHAG00000010257	-	89	93.981	Sarcophilus_harrisii
ENSCCAG00000024231	SNRPN	99	77.824	ENSSARG00000000072	SNRPN	100	77.824	Sorex_araneus
ENSCCAG00000024231	SNRPN	100	99.167	ENSSSCG00000028124	SNRPN	100	99.167	Sus_scrofa
ENSCCAG00000024231	SNRPN	100	98.750	ENSTTRG00000010966	SNRPN	89	98.750	Tursiops_truncatus
ENSCCAG00000024231	SNRPN	93	99.552	ENSUAMG00000016284	SNRPN	78	99.552	Ursus_americanus
ENSCCAG00000024231	SNRPN	100	99.583	ENSUMAG00000025589	SNRPN	100	99.583	Ursus_maritimus
ENSCCAG00000024231	SNRPN	95	99.563	ENSVVUG00000017971	SNRPN	94	99.563	Vulpes_vulpes