EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000024301 (Gene tree)
Gene ID: 108292223
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 28094 bases
Position: chrKV389909.1:293976-322069
Accession: 108292223
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000013019	RRM_1	PF00076.22	4.3e-18	1	2
ENSCCAP00000013019	RRM_1	PF00076.22	4.3e-18	2	2
ENSCCAP00000013024	RRM_1	PF00076.22	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000030451	RNPC3-202	1557	-	ENSCCAP00000013024	518 (aa)	-	A0A2K5QAY0
ENSCCAT00000030446	RNPC3-201	3752	XM_017512960	ENSCCAP00000013019	517 (aa)	XP_017368449	A0A2K5QAX5

Gene Model

Click here to download ENSCCAG00000024301's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000024301's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000024301	RNPC3	100	97.872	ENSG00000185946	RNPC3	100	100.000	Homo_sapiens
ENSCCAG00000024301	RNPC3	95	56.452	ENSAPOG00000017371	rnpc3	97	56.452	Acanthochromis_polyacanthus
ENSCCAG00000024301	RNPC3	98	92.731	ENSAMEG00000001694	RNPC3	100	91.731	Ailuropoda_melanoleuca
ENSCCAG00000024301	RNPC3	95	52.871	ENSACIG00000021043	rnpc3	97	53.200	Amphilophus_citrinellus
ENSCCAG00000024301	RNPC3	95	55.689	ENSAOCG00000014052	rnpc3	95	55.689	Amphiprion_ocellaris
ENSCCAG00000024301	RNPC3	95	55.489	ENSAPEG00000008739	rnpc3	95	55.489	Amphiprion_percula
ENSCCAG00000024301	RNPC3	95	54.455	ENSATEG00000021263	rnpc3	97	54.473	Anabas_testudineus
ENSCCAG00000024301	RNPC3	87	68.282	ENSAPLG00000015605	RNPC3	99	69.163	Anas_platyrhynchos
ENSCCAG00000024301	RNPC3	95	68.432	ENSACAG00000002029	RNPC3	96	69.076	Anolis_carolinensis
ENSCCAG00000024301	RNPC3	100	98.453	ENSANAG00000019950	RNPC3	100	98.453	Aotus_nancymaae
ENSCCAG00000024301	RNPC3	95	54.343	ENSACLG00000014702	rnpc3	96	54.343	Astatotilapia_calliptera
ENSCCAG00000024301	RNPC3	94	57.831	ENSAMXG00000033372	rnpc3	96	57.831	Astyanax_mexicanus
ENSCCAG00000024301	RNPC3	100	92.843	ENSBTAG00000019091	RNPC3	100	92.843	Bos_taurus
ENSCCAG00000024301	RNPC3	100	94.971	ENSCJAG00000035686	RNPC3	100	94.971	Callithrix_jacchus
ENSCCAG00000024301	RNPC3	100	92.085	ENSCAFG00000019972	RNPC3	100	92.085	Canis_familiaris
ENSCCAG00000024301	RNPC3	100	92.278	ENSCAFG00020011300	RNPC3	100	92.278	Canis_lupus_dingo
ENSCCAG00000024301	RNPC3	100	92.650	ENSCHIG00000020361	RNPC3	100	92.650	Capra_hircus
ENSCCAG00000024301	RNPC3	100	90.716	ENSTSYG00000030256	RNPC3	100	90.716	Carlito_syrichta
ENSCCAG00000024301	RNPC3	84	80.092	ENSCAPG00000013600	RNPC3	99	78.947	Cavia_aperea
ENSCCAG00000024301	RNPC3	100	90.716	ENSCPOG00000031638	RNPC3	100	90.716	Cavia_porcellus
ENSCCAG00000024301	RNPC3	99	73.777	ENSCATG00000035930	-	99	72.603	Cercocebus_atys
ENSCCAG00000024301	RNPC3	99	97.476	ENSCATG00000002086	RNPC3	99	97.476	Cercocebus_atys
ENSCCAG00000024301	RNPC3	100	86.847	ENSCLAG00000005169	RNPC3	100	86.847	Chinchilla_lanigera
ENSCCAG00000024301	RNPC3	99	97.282	ENSCSAG00000001519	RNPC3	99	97.282	Chlorocebus_sabaeus
ENSCCAG00000024301	RNPC3	95	69.618	ENSCPBG00000028311	RNPC3	95	69.618	Chrysemys_picta_bellii
ENSCCAG00000024301	RNPC3	93	37.967	ENSCSAVG00000002800	-	74	60.833	Ciona_savignyi
ENSCCAG00000024301	RNPC3	99	97.282	ENSCANG00000031444	RNPC3	99	97.282	Colobus_angolensis_palliatus
ENSCCAG00000024301	RNPC3	99	89.341	ENSCGRG00001019276	Rnpc3	100	89.341	Cricetulus_griseus_chok1gshd
ENSCCAG00000024301	RNPC3	87	90.044	ENSCGRG00000000053	Rnpc3	100	90.044	Cricetulus_griseus_crigri
ENSCCAG00000024301	RNPC3	97	52.559	ENSCSEG00000013475	rnpc3	95	53.689	Cynoglossus_semilaevis
ENSCCAG00000024301	RNPC3	95	54.183	ENSCVAG00000002645	rnpc3	96	54.473	Cyprinodon_variegatus
ENSCCAG00000024301	RNPC3	95	56.522	ENSDARG00000011247	rnpc3	94	65.517	Danio_rerio
ENSCCAG00000024301	RNPC3	100	90.944	ENSDNOG00000044555	-	100	90.944	Dasypus_novemcinctus
ENSCCAG00000024301	RNPC3	100	90.944	ENSDNOG00000047498	-	100	90.944	Dasypus_novemcinctus
ENSCCAG00000024301	RNPC3	99	89.535	ENSDORG00000027343	Rnpc3	99	89.535	Dipodomys_ordii
ENSCCAG00000024301	RNPC3	95	48.733	ENSEBUG00000002068	rnpc3	97	48.532	Eptatretus_burgeri
ENSCCAG00000024301	RNPC3	100	91.892	ENSEASG00005015957	RNPC3	100	91.892	Equus_asinus_asinus
ENSCCAG00000024301	RNPC3	100	92.085	ENSECAG00000021148	RNPC3	100	92.085	Equus_caballus
ENSCCAG00000024301	RNPC3	95	53.269	ENSELUG00000002264	rnpc3	97	50.943	Esox_lucius
ENSCCAG00000024301	RNPC3	100	92.278	ENSFCAG00000024312	RNPC3	100	92.278	Felis_catus
ENSCCAG00000024301	RNPC3	87	71.366	ENSFALG00000002580	RNPC3	99	71.770	Ficedula_albicollis
ENSCCAG00000024301	RNPC3	99	90.698	ENSFDAG00000019948	RNPC3	100	90.698	Fukomys_damarensis
ENSCCAG00000024301	RNPC3	95	51.205	ENSFHEG00000020647	rnpc3	98	50.000	Fundulus_heteroclitus
ENSCCAG00000024301	RNPC3	95	53.600	ENSGMOG00000019213	rnpc3	96	52.811	Gadus_morhua
ENSCCAG00000024301	RNPC3	95	70.707	ENSGALG00000005162	RNPC3	89	70.101	Gallus_gallus
ENSCCAG00000024301	RNPC3	95	52.811	ENSGAFG00000017236	rnpc3	96	52.811	Gambusia_affinis
ENSCCAG00000024301	RNPC3	95	55.306	ENSGACG00000002048	rnpc3	96	54.762	Gasterosteus_aculeatus
ENSCCAG00000024301	RNPC3	95	69.215	ENSGAGG00000008438	RNPC3	98	67.773	Gopherus_agassizii
ENSCCAG00000024301	RNPC3	96	79.234	ENSGGOG00000026201	-	95	79.234	Gorilla_gorilla
ENSCCAG00000024301	RNPC3	78	78.947	ENSHBUG00000015966	rnpc3	82	78.947	Haplochromis_burtoni
ENSCCAG00000024301	RNPC3	100	91.296	ENSHGLG00000001708	RNPC3	100	91.296	Heterocephalus_glaber_female
ENSCCAG00000024301	RNPC3	100	91.296	ENSHGLG00100003005	RNPC3	100	91.296	Heterocephalus_glaber_male
ENSCCAG00000024301	RNPC3	95	54.871	ENSHCOG00000017135	rnpc3	97	54.871	Hippocampus_comes
ENSCCAG00000024301	RNPC3	93	56.911	ENSIPUG00000002916	rnpc3	95	56.911	Ictalurus_punctatus
ENSCCAG00000024301	RNPC3	100	91.296	ENSSTOG00000025020	RNPC3	100	91.296	Ictidomys_tridecemlineatus
ENSCCAG00000024301	RNPC3	99	87.403	ENSJJAG00000010203	Rnpc3	100	88.178	Jaculus_jaculus
ENSCCAG00000024301	RNPC3	95	55.040	ENSKMAG00000017358	rnpc3	98	54.134	Kryptolebias_marmoratus
ENSCCAG00000024301	RNPC3	95	55.600	ENSLBEG00000024901	rnpc3	95	55.912	Labrus_bergylta
ENSCCAG00000024301	RNPC3	93	62.963	ENSLACG00000005720	RNPC3	89	63.580	Latimeria_chalumnae
ENSCCAG00000024301	RNPC3	95	58.571	ENSLOCG00000007986	rnpc3	96	60.532	Lepisosteus_oculatus
ENSCCAG00000024301	RNPC3	99	89.341	ENSLAFG00000032342	RNPC3	100	89.341	Loxodonta_africana
ENSCCAG00000024301	RNPC3	99	97.282	ENSMFAG00000002004	RNPC3	99	97.282	Macaca_fascicularis
ENSCCAG00000024301	RNPC3	99	70.841	ENSMFAG00000002917	-	98	71.233	Macaca_fascicularis
ENSCCAG00000024301	RNPC3	84	87.907	ENSMMUG00000002098	-	93	87.907	Macaca_mulatta
ENSCCAG00000024301	RNPC3	99	97.282	ENSMMUG00000018039	RNPC3	99	97.282	Macaca_mulatta
ENSCCAG00000024301	RNPC3	99	64.971	ENSMNEG00000029209	-	99	67.710	Macaca_nemestrina
ENSCCAG00000024301	RNPC3	99	92.427	ENSMNEG00000033950	RNPC3	99	92.427	Macaca_nemestrina
ENSCCAG00000024301	RNPC3	98	73.294	ENSMLEG00000034644	-	98	72.287	Mandrillus_leucophaeus
ENSCCAG00000024301	RNPC3	99	97.476	ENSMLEG00000033628	RNPC3	99	97.476	Mandrillus_leucophaeus
ENSCCAG00000024301	RNPC3	95	51.793	ENSMAMG00000007496	rnpc3	97	50.581	Mastacembelus_armatus
ENSCCAG00000024301	RNPC3	95	53.254	ENSMZEG00005020233	rnpc3	97	53.254	Maylandia_zebra
ENSCCAG00000024301	RNPC3	87	69.890	ENSMGAG00000006381	RNPC3	99	69.890	Meleagris_gallopavo
ENSCCAG00000024301	RNPC3	97	90.982	ENSMAUG00000001358	Rnpc3	100	89.729	Mesocricetus_auratus
ENSCCAG00000024301	RNPC3	99	93.605	ENSMICG00000029591	RNPC3	99	93.605	Microcebus_murinus
ENSCCAG00000024301	RNPC3	97	90.400	ENSMOCG00000013423	Rnpc3	100	88.803	Microtus_ochrogaster
ENSCCAG00000024301	RNPC3	95	51.318	ENSMMOG00000005309	rnpc3	97	51.303	Mola_mola
ENSCCAG00000024301	RNPC3	99	77.907	ENSMODG00000002946	RNPC3	99	77.907	Monodelphis_domestica
ENSCCAG00000024301	RNPC3	95	52.811	ENSMALG00000015471	rnpc3	97	53.012	Monopterus_albus
ENSCCAG00000024301	RNPC3	99	87.984	MGP_CAROLIEiJ_G0025555	Rnpc3	100	87.984	Mus_caroli
ENSCCAG00000024301	RNPC3	99	88.566	ENSMUSG00000027981	Rnpc3	100	88.566	Mus_musculus
ENSCCAG00000024301	RNPC3	99	87.984	MGP_PahariEiJ_G0027001	Rnpc3	100	87.984	Mus_pahari
ENSCCAG00000024301	RNPC3	99	87.984	MGP_SPRETEiJ_G0026505	Rnpc3	100	87.984	Mus_spretus
ENSCCAG00000024301	RNPC3	100	91.908	ENSMPUG00000007349	RNPC3	100	91.908	Mustela_putorius_furo
ENSCCAG00000024301	RNPC3	100	88.781	ENSMLUG00000028743	RNPC3	100	88.781	Myotis_lucifugus
ENSCCAG00000024301	RNPC3	99	89.105	ENSNGAG00000010939	Rnpc3	100	89.147	Nannospalax_galili
ENSCCAG00000024301	RNPC3	95	54.141	ENSNBRG00000012196	rnpc3	93	54.141	Neolamprologus_brichardi
ENSCCAG00000024301	RNPC3	100	97.292	ENSNLEG00000012013	RNPC3	100	97.292	Nomascus_leucogenys
ENSCCAG00000024301	RNPC3	100	88.781	ENSODEG00000007612	RNPC3	100	88.781	Octodon_degus
ENSCCAG00000024301	RNPC3	95	54.747	ENSONIG00000004770	rnpc3	99	54.747	Oreochromis_niloticus
ENSCCAG00000024301	RNPC3	90	77.682	ENSOANG00000008220	RNPC3	99	78.112	Ornithorhynchus_anatinus
ENSCCAG00000024301	RNPC3	100	91.683	ENSOCUG00000004016	RNPC3	100	91.683	Oryctolagus_cuniculus
ENSCCAG00000024301	RNPC3	95	53.012	ENSORLG00000005694	rnpc3	97	53.012	Oryzias_latipes
ENSCCAG00000024301	RNPC3	95	53.815	ENSORLG00020005513	rnpc3	97	53.815	Oryzias_latipes_hni
ENSCCAG00000024301	RNPC3	95	53.213	ENSORLG00015002179	rnpc3	97	53.213	Oryzias_latipes_hsok
ENSCCAG00000024301	RNPC3	95	54.343	ENSOMEG00000017737	rnpc3	97	55.242	Oryzias_melastigma
ENSCCAG00000024301	RNPC3	100	93.230	ENSOGAG00000026182	RNPC3	100	93.230	Otolemur_garnettii
ENSCCAG00000024301	RNPC3	100	92.456	ENSOARG00000018719	RNPC3	100	92.456	Ovis_aries
ENSCCAG00000024301	RNPC3	100	97.490	ENSPPAG00000037459	RNPC3	100	97.490	Pan_paniscus
ENSCCAG00000024301	RNPC3	100	79.110	ENSPPAG00000030278	-	100	79.110	Pan_paniscus
ENSCCAG00000024301	RNPC3	100	92.278	ENSPPRG00000020246	RNPC3	100	92.278	Panthera_pardus
ENSCCAG00000024301	RNPC3	98	92.520	ENSPTIG00000009887	RNPC3	100	92.520	Panthera_tigris_altaica
ENSCCAG00000024301	RNPC3	100	77.950	ENSPTRG00000044227	-	100	77.950	Pan_troglodytes
ENSCCAG00000024301	RNPC3	100	97.679	ENSPTRG00000033902	RNPC3	100	97.679	Pan_troglodytes
ENSCCAG00000024301	RNPC3	98	76.228	ENSPANG00000029957	-	100	74.853	Papio_anubis
ENSCCAG00000024301	RNPC3	99	97.282	ENSPANG00000012137	RNPC3	99	97.282	Papio_anubis
ENSCCAG00000024301	RNPC3	95	52.988	ENSPKIG00000008828	rnpc3	95	51.468	Paramormyrops_kingsleyae
ENSCCAG00000024301	RNPC3	63	68.373	ENSPSIG00000007396	RNPC3	99	66.867	Pelodiscus_sinensis
ENSCCAG00000024301	RNPC3	93	51.619	ENSPMGG00000011742	rnpc3	95	52.333	Periophthalmus_magnuspinnatus
ENSCCAG00000024301	RNPC3	88	89.278	ENSPEMG00000020112	Rnpc3	100	90.044	Peromyscus_maniculatus_bairdii
ENSCCAG00000024301	RNPC3	95	45.665	ENSPMAG00000003778	rnpc3	97	45.962	Petromyzon_marinus
ENSCCAG00000024301	RNPC3	99	78.295	ENSPCIG00000004415	-	99	78.295	Phascolarctos_cinereus
ENSCCAG00000024301	RNPC3	96	52.191	ENSPFOG00000009895	rnpc3	97	52.410	Poecilia_formosa
ENSCCAG00000024301	RNPC3	96	52.191	ENSPLAG00000012023	rnpc3	97	52.410	Poecilia_latipinna
ENSCCAG00000024301	RNPC3	96	52.778	ENSPMEG00000003663	rnpc3	97	52.610	Poecilia_mexicana
ENSCCAG00000024301	RNPC3	96	52.390	ENSPREG00000010206	rnpc3	97	52.505	Poecilia_reticulata
ENSCCAG00000024301	RNPC3	84	94.700	ENSPPYG00000001102	RNPC3	99	94.700	Pongo_abelii
ENSCCAG00000024301	RNPC3	95	54.141	ENSPNYG00000020603	rnpc3	96	54.141	Pundamilia_nyererei
ENSCCAG00000024301	RNPC3	96	54.280	ENSPNAG00000000524	rnpc3	90	55.315	Pygocentrus_nattereri
ENSCCAG00000024301	RNPC3	99	87.984	ENSRNOG00000017310	Rnpc3	100	87.984	Rattus_norvegicus
ENSCCAG00000024301	RNPC3	99	92.054	ENSRBIG00000043897	RNPC3	99	92.054	Rhinopithecus_bieti
ENSCCAG00000024301	RNPC3	99	97.864	ENSRROG00000032334	RNPC3	99	97.864	Rhinopithecus_roxellana
ENSCCAG00000024301	RNPC3	100	97.292	ENSSBOG00000024473	RNPC3	100	97.292	Saimiri_boliviensis_boliviensis
ENSCCAG00000024301	RNPC3	99	77.907	ENSSHAG00000011859	RNPC3	99	77.907	Sarcophilus_harrisii
ENSCCAG00000024301	RNPC3	96	59.163	ENSSFOG00015013055	rnpc3	99	57.670	Scleropages_formosus
ENSCCAG00000024301	RNPC3	95	51.497	ENSSMAG00000020346	rnpc3	97	50.775	Scophthalmus_maximus
ENSCCAG00000024301	RNPC3	95	54.274	ENSSDUG00000006600	rnpc3	96	54.274	Seriola_dumerili
ENSCCAG00000024301	RNPC3	95	54.871	ENSSLDG00000007979	rnpc3	96	54.871	Seriola_lalandi_dorsalis
ENSCCAG00000024301	RNPC3	93	71.134	ENSSPUG00000008539	-	92	71.488	Sphenodon_punctatus
ENSCCAG00000024301	RNPC3	96	65.200	ENSSPUG00000003872	-	92	65.524	Sphenodon_punctatus
ENSCCAG00000024301	RNPC3	95	55.466	ENSSPAG00000005633	rnpc3	97	55.691	Stegastes_partitus
ENSCCAG00000024301	RNPC3	100	91.876	ENSSSCG00000037254	RNPC3	100	90.716	Sus_scrofa
ENSCCAG00000024301	RNPC3	87	70.861	ENSTGUG00000004795	-	99	69.978	Taeniopygia_guttata
ENSCCAG00000024301	RNPC3	95	54.709	ENSTNIG00000018963	rnpc3	97	54.709	Tetraodon_nigroviridis
ENSCCAG00000024301	RNPC3	98	93.110	ENSUMAG00000007775	RNPC3	100	93.110	Ursus_maritimus
ENSCCAG00000024301	RNPC3	100	92.278	ENSVVUG00000000331	RNPC3	100	92.278	Vulpes_vulpes
ENSCCAG00000024301	RNPC3	95	51.303	ENSXETG00000025027	rnpc3	96	51.303	Xenopus_tropicalis
ENSCCAG00000024301	RNPC3	96	52.174	ENSXCOG00000005013	rnpc3	97	50.480	Xiphophorus_couchianus
ENSCCAG00000024301	RNPC3	96	52.579	ENSXMAG00000006495	rnpc3	97	52.579	Xiphophorus_maculatus