EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000024564 (Gene tree)
Gene ID: 108293960
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 47255 bases
Position: chrKV389981.1:941839-989093
Accession: 108293960
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000013808	PRP1_N	PF06424.12	2.4e-57	1	1
ENSCCAP00000013820	PRP1_N	PF06424.12	1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000031253	PRPF6-202	2325	-	ENSCCAP00000013820	774 (aa)	-	A0A2K5QD98
ENSCCAT00000031241	PRPF6-201	2784	XM_017515632	ENSCCAP00000013808	927 (aa)	XP_017371121	A0A2K5QD37

Gene Model

Click here to download ENSCCAG00000024564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000024564's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000024564	PRPF6	100	95.855	ENSG00000101161	PRPF6	100	95.855	Homo_sapiens
ENSCCAG00000024564	PRPF6	100	89.267	ENSAPOG00000010395	prpf6	96	89.692	Acanthochromis_polyacanthus
ENSCCAG00000024564	PRPF6	100	93.312	ENSAMEG00000001916	PRPF6	99	93.206	Ailuropoda_melanoleuca
ENSCCAG00000024564	PRPF6	100	88.948	ENSACIG00000019862	prpf6	96	89.373	Amphilophus_citrinellus
ENSCCAG00000024564	PRPF6	100	89.160	ENSAOCG00000012988	prpf6	96	89.586	Amphiprion_ocellaris
ENSCCAG00000024564	PRPF6	100	84.574	ENSAPEG00000008301	prpf6	100	85.005	Amphiprion_percula
ENSCCAG00000024564	PRPF6	100	88.629	ENSATEG00000005581	prpf6	96	89.054	Anabas_testudineus
ENSCCAG00000024564	PRPF6	100	93.730	ENSACAG00000006464	PRPF6	95	93.730	Anolis_carolinensis
ENSCCAG00000024564	PRPF6	97	100.000	ENSANAG00000012661	PRPF6	97	100.000	Aotus_nancymaae
ENSCCAG00000024564	PRPF6	100	88.842	ENSACLG00000025875	prpf6	96	89.267	Astatotilapia_calliptera
ENSCCAG00000024564	PRPF6	99	89.362	ENSAMXG00000001929	prpf6	96	89.681	Astyanax_mexicanus
ENSCCAG00000024564	PRPF6	100	94.261	ENSBTAG00000011656	PRPF6	100	94.155	Bos_taurus
ENSCCAG00000024564	PRPF6	100	96.599	ENSCJAG00000010616	PRPF6	100	96.805	Callithrix_jacchus
ENSCCAG00000024564	PRPF6	100	94.580	ENSCAFG00000013165	PRPF6	100	94.474	Canis_familiaris
ENSCCAG00000024564	PRPF6	100	94.580	ENSCAFG00020002050	PRPF6	100	94.474	Canis_lupus_dingo
ENSCCAG00000024564	PRPF6	100	94.261	ENSCHIG00000018187	PRPF6	100	94.155	Capra_hircus
ENSCCAG00000024564	PRPF6	100	95.005	ENSTSYG00000007814	PRPF6	100	95.005	Carlito_syrichta
ENSCCAG00000024564	PRPF6	97	93.675	ENSCAPG00000015077	PRPF6	100	93.239	Cavia_aperea
ENSCCAG00000024564	PRPF6	100	95.005	ENSCPOG00000007518	PRPF6	100	95.005	Cavia_porcellus
ENSCCAG00000024564	PRPF6	100	95.749	ENSCATG00000037473	PRPF6	97	99.158	Cercocebus_atys
ENSCCAG00000024564	PRPF6	100	90.967	ENSCLAG00000003854	PRPF6	100	90.967	Chinchilla_lanigera
ENSCCAG00000024564	PRPF6	100	90.707	ENSCSAG00000016742	PRPF6	100	90.707	Chlorocebus_sabaeus
ENSCCAG00000024564	PRPF6	84	80.650	ENSCHOG00000003315	-	100	80.650	Choloepus_hoffmanni
ENSCCAG00000024564	PRPF6	100	93.518	ENSCPBG00000013964	PRPF6	96	93.943	Chrysemys_picta_bellii
ENSCCAG00000024564	PRPF6	99	70.085	ENSCING00000008817	-	99	69.979	Ciona_intestinalis
ENSCCAG00000024564	PRPF6	100	95.749	ENSCANG00000038230	PRPF6	100	95.749	Colobus_angolensis_palliatus
ENSCCAG00000024564	PRPF6	100	95.112	ENSCGRG00001022666	Prpf6	100	95.112	Cricetulus_griseus_chok1gshd
ENSCCAG00000024564	PRPF6	100	83.741	ENSCSEG00000018561	prpf6	100	84.166	Cynoglossus_semilaevis
ENSCCAG00000024564	PRPF6	100	89.479	ENSCVAG00000010550	prpf6	96	89.904	Cyprinodon_variegatus
ENSCCAG00000024564	PRPF6	100	88.629	ENSDARG00000091367	prpf6	99	89.054	Danio_rerio
ENSCCAG00000024564	PRPF6	100	93.943	ENSDNOG00000040544	PRPF6	100	93.836	Dasypus_novemcinctus
ENSCCAG00000024564	PRPF6	91	94.042	ENSDORG00000005406	Prpf6	100	93.925	Dipodomys_ordii
ENSCCAG00000024564	PRPF6	99	69.313	FBgn0036828	CG6841	98	69.742	Drosophila_melanogaster
ENSCCAG00000024564	PRPF6	85	90.756	ENSETEG00000004447	PRPF6	76	100.000	Echinops_telfairi
ENSCCAG00000024564	PRPF6	99	84.305	ENSEBUG00000008835	prpf6	99	84.305	Eptatretus_burgeri
ENSCCAG00000024564	PRPF6	100	94.368	ENSEASG00005023115	PRPF6	100	94.261	Equus_asinus_asinus
ENSCCAG00000024564	PRPF6	100	90.223	ENSECAG00000013983	PRPF6	100	90.117	Equus_caballus
ENSCCAG00000024564	PRPF6	90	100.000	ENSEEUG00000000180	PRPF6	81	100.000	Erinaceus_europaeus
ENSCCAG00000024564	PRPF6	100	87.885	ENSELUG00000001945	prpf6	93	87.885	Esox_lucius
ENSCCAG00000024564	PRPF6	100	94.368	ENSFCAG00000001183	PRPF6	100	94.261	Felis_catus
ENSCCAG00000024564	PRPF6	100	93.943	ENSFALG00000010326	-	97	93.943	Ficedula_albicollis
ENSCCAG00000024564	PRPF6	100	86.823	ENSFALG00000006046	-	97	86.716	Ficedula_albicollis
ENSCCAG00000024564	PRPF6	100	93.518	ENSFDAG00000006451	PRPF6	100	94.671	Fukomys_damarensis
ENSCCAG00000024564	PRPF6	100	89.798	ENSFHEG00000000560	prpf6	96	89.798	Fundulus_heteroclitus
ENSCCAG00000024564	PRPF6	100	85.624	ENSGMOG00000015622	prpf6	99	85.624	Gadus_morhua
ENSCCAG00000024564	PRPF6	100	93.943	ENSGALG00000006001	PRPF6	100	93.943	Gallus_gallus
ENSCCAG00000024564	PRPF6	100	84.378	ENSGAFG00000021109	prpf6	96	84.803	Gambusia_affinis
ENSCCAG00000024564	PRPF6	100	87.885	ENSGACG00000002576	prpf6	99	87.885	Gasterosteus_aculeatus
ENSCCAG00000024564	PRPF6	100	93.411	ENSGAGG00000008653	PRPF6	96	93.836	Gopherus_agassizii
ENSCCAG00000024564	PRPF6	100	95.855	ENSGGOG00000016876	PRPF6	100	99.322	Gorilla_gorilla
ENSCCAG00000024564	PRPF6	100	88.842	ENSHBUG00000004496	prpf6	96	89.267	Haplochromis_burtoni
ENSCCAG00000024564	PRPF6	100	94.793	ENSHGLG00000009222	PRPF6	100	94.793	Heterocephalus_glaber_female
ENSCCAG00000024564	PRPF6	97	94.656	ENSHGLG00100016600	PRPF6	100	94.656	Heterocephalus_glaber_male
ENSCCAG00000024564	PRPF6	100	87.885	ENSHCOG00000011513	prpf6	96	88.310	Hippocampus_comes
ENSCCAG00000024564	PRPF6	100	89.692	ENSIPUG00000004912	prpf6	96	89.692	Ictalurus_punctatus
ENSCCAG00000024564	PRPF6	100	92.251	ENSSTOG00000002922	PRPF6	100	92.038	Ictidomys_tridecemlineatus
ENSCCAG00000024564	PRPF6	100	95.005	ENSJJAG00000000836	Prpf6	100	95.005	Jaculus_jaculus
ENSCCAG00000024564	PRPF6	100	89.054	ENSKMAG00000017800	prpf6	96	89.479	Kryptolebias_marmoratus
ENSCCAG00000024564	PRPF6	100	88.523	ENSLBEG00000012582	prpf6	96	88.523	Labrus_bergylta
ENSCCAG00000024564	PRPF6	100	90.861	ENSLOCG00000004827	prpf6	96	89.904	Lepisosteus_oculatus
ENSCCAG00000024564	PRPF6	100	94.155	ENSLAFG00000005272	PRPF6	100	94.155	Loxodonta_africana
ENSCCAG00000024564	PRPF6	100	95.749	ENSMFAG00000037542	PRPF6	100	99.153	Macaca_fascicularis
ENSCCAG00000024564	PRPF6	100	93.642	ENSMMUG00000015558	PRPF6	98	99.480	Macaca_mulatta
ENSCCAG00000024564	PRPF6	100	85.775	ENSMNEG00000045555	PRPF6	100	85.775	Macaca_nemestrina
ENSCCAG00000024564	PRPF6	100	89.054	ENSMAMG00000010718	prpf6	96	89.479	Mastacembelus_armatus
ENSCCAG00000024564	PRPF6	100	88.641	ENSMZEG00005015261	-	99	89.066	Maylandia_zebra
ENSCCAG00000024564	PRPF6	94	88.209	ENSMZEG00005026539	prpf6	100	88.549	Maylandia_zebra
ENSCCAG00000024564	PRPF6	97	93.784	ENSMGAG00000006634	PRPF6	100	93.784	Meleagris_gallopavo
ENSCCAG00000024564	PRPF6	100	95.218	ENSMAUG00000013969	Prpf6	100	95.218	Mesocricetus_auratus
ENSCCAG00000024564	PRPF6	87	93.917	ENSMICG00000017793	PRPF6	98	93.711	Microcebus_murinus
ENSCCAG00000024564	PRPF6	100	95.112	ENSMOCG00000001701	Prpf6	100	95.112	Microtus_ochrogaster
ENSCCAG00000024564	PRPF6	100	88.417	ENSMMOG00000020419	prpf6	100	88.842	Mola_mola
ENSCCAG00000024564	PRPF6	97	98.276	ENSMODG00000017051	PRPF6	99	98.276	Monodelphis_domestica
ENSCCAG00000024564	PRPF6	99	89.044	ENSMALG00000000089	prpf6	100	89.044	Monopterus_albus
ENSCCAG00000024564	PRPF6	100	88.523	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSCCAG00000024564	PRPF6	100	95.218	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSCCAG00000024564	PRPF6	100	95.218	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSCCAG00000024564	PRPF6	100	95.218	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSCCAG00000024564	PRPF6	91	93.802	ENSMPUG00000008673	PRPF6	99	93.683	Mustela_putorius_furo
ENSCCAG00000024564	PRPF6	100	95.112	ENSNGAG00000003365	Prpf6	100	95.112	Nannospalax_galili
ENSCCAG00000024564	PRPF6	100	88.948	ENSNBRG00000015025	prpf6	96	89.373	Neolamprologus_brichardi
ENSCCAG00000024564	PRPF6	100	95.749	ENSNLEG00000010208	PRPF6	100	97.288	Nomascus_leucogenys
ENSCCAG00000024564	PRPF6	100	88.270	ENSMEUG00000009824	-	90	88.270	Notamacropus_eugenii
ENSCCAG00000024564	PRPF6	100	89.692	ENSODEG00000004841	PRPF6	91	99.823	Octodon_degus
ENSCCAG00000024564	PRPF6	100	88.629	ENSONIG00000017406	prpf6	96	89.054	Oreochromis_niloticus
ENSCCAG00000024564	PRPF6	100	94.155	ENSOANG00000004920	PRPF6	100	94.155	Ornithorhynchus_anatinus
ENSCCAG00000024564	PRPF6	99	93.026	ENSOCUG00000014151	PRPF6	100	92.918	Oryctolagus_cuniculus
ENSCCAG00000024564	PRPF6	100	89.054	ENSORLG00000009592	prpf6	96	89.054	Oryzias_latipes
ENSCCAG00000024564	PRPF6	100	89.160	ENSORLG00020001458	prpf6	96	89.160	Oryzias_latipes_hni
ENSCCAG00000024564	PRPF6	100	89.160	ENSORLG00015018762	prpf6	96	89.160	Oryzias_latipes_hsok
ENSCCAG00000024564	PRPF6	100	89.054	ENSOMEG00000012174	prpf6	96	89.479	Oryzias_melastigma
ENSCCAG00000024564	PRPF6	100	87.155	ENSOGAG00000007573	PRPF6	100	87.049	Otolemur_garnettii
ENSCCAG00000024564	PRPF6	100	93.836	ENSOARG00000008776	PRPF6	99	93.730	Ovis_aries
ENSCCAG00000024564	PRPF6	100	95.855	ENSPPAG00000008686	PRPF6	100	99.322	Pan_paniscus
ENSCCAG00000024564	PRPF6	100	94.368	ENSPPRG00000008497	PRPF6	100	94.261	Panthera_pardus
ENSCCAG00000024564	PRPF6	97	94.220	ENSPTIG00000011184	PRPF6	97	94.111	Panthera_tigris_altaica
ENSCCAG00000024564	PRPF6	100	95.855	ENSPTRG00000013765	PRPF6	100	99.322	Pan_troglodytes
ENSCCAG00000024564	PRPF6	100	95.218	ENSPANG00000024135	PRPF6	100	95.218	Papio_anubis
ENSCCAG00000024564	PRPF6	100	90.223	ENSPKIG00000005627	prpf6	99	90.648	Paramormyrops_kingsleyae
ENSCCAG00000024564	PRPF6	94	93.764	ENSPSIG00000007717	PRPF6	100	93.764	Pelodiscus_sinensis
ENSCCAG00000024564	PRPF6	100	87.021	ENSPMGG00000008925	prpf6	96	87.234	Periophthalmus_magnuspinnatus
ENSCCAG00000024564	PRPF6	100	95.112	ENSPEMG00000016036	Prpf6	100	95.112	Peromyscus_maniculatus_bairdii
ENSCCAG00000024564	PRPF6	99	85.016	ENSPMAG00000006144	prpf6	99	85.016	Petromyzon_marinus
ENSCCAG00000024564	PRPF6	100	94.474	ENSPCIG00000017909	PRPF6	100	94.474	Phascolarctos_cinereus
ENSCCAG00000024564	PRPF6	100	89.160	ENSPFOG00000006431	prpf6	96	89.586	Poecilia_formosa
ENSCCAG00000024564	PRPF6	100	89.054	ENSPLAG00000005974	prpf6	96	89.479	Poecilia_latipinna
ENSCCAG00000024564	PRPF6	100	89.267	ENSPMEG00000009977	prpf6	96	89.692	Poecilia_mexicana
ENSCCAG00000024564	PRPF6	100	89.160	ENSPREG00000017993	prpf6	92	89.586	Poecilia_reticulata
ENSCCAG00000024564	PRPF6	100	95.324	ENSPPYG00000011256	PRPF6	100	95.324	Pongo_abelii
ENSCCAG00000024564	PRPF6	95	99.510	ENSPCAG00000006536	PRPF6	83	99.510	Procavia_capensis
ENSCCAG00000024564	PRPF6	100	94.368	ENSPCOG00000016881	PRPF6	100	94.368	Propithecus_coquereli
ENSCCAG00000024564	PRPF6	100	89.648	ENSPVAG00000014316	PRPF6	100	89.648	Pteropus_vampyrus
ENSCCAG00000024564	PRPF6	100	84.430	ENSPNYG00000001939	prpf6	70	84.430	Pundamilia_nyererei
ENSCCAG00000024564	PRPF6	100	89.479	ENSPNAG00000015606	prpf6	96	89.904	Pygocentrus_nattereri
ENSCCAG00000024564	PRPF6	100	95.112	ENSRNOG00000051498	Prpf6	100	95.112	Rattus_norvegicus
ENSCCAG00000024564	PRPF6	100	95.749	ENSRBIG00000043613	PRPF6	100	99.492	Rhinopithecus_bieti
ENSCCAG00000024564	PRPF6	100	96.802	ENSRROG00000040969	PRPF6	100	99.492	Rhinopithecus_roxellana
ENSCCAG00000024564	PRPF6	91	95.575	ENSSBOG00000020632	PRPF6	98	94.901	Saimiri_boliviensis_boliviensis
ENSCCAG00000024564	PRPF6	100	94.474	ENSSHAG00000016810	PRPF6	100	94.474	Sarcophilus_harrisii
ENSCCAG00000024564	PRPF6	99	90.440	ENSSFOG00015020859	prpf6	100	90.870	Scleropages_formosus
ENSCCAG00000024564	PRPF6	100	88.417	ENSSMAG00000008112	prpf6	96	88.417	Scophthalmus_maximus
ENSCCAG00000024564	PRPF6	100	89.054	ENSSDUG00000016142	prpf6	96	89.479	Seriola_dumerili
ENSCCAG00000024564	PRPF6	100	89.054	ENSSLDG00000025283	prpf6	100	87.918	Seriola_lalandi_dorsalis
ENSCCAG00000024564	PRPF6	94	92.517	ENSSPUG00000018260	PRPF6	100	92.517	Sphenodon_punctatus
ENSCCAG00000024564	PRPF6	100	89.054	ENSSPAG00000015850	prpf6	96	89.479	Stegastes_partitus
ENSCCAG00000024564	PRPF6	100	93.943	ENSSSCG00000029119	PRPF6	99	95.645	Sus_scrofa
ENSCCAG00000024564	PRPF6	100	94.049	ENSTGUG00000007221	PRPF6	99	94.049	Taeniopygia_guttata
ENSCCAG00000024564	PRPF6	100	87.991	ENSTRUG00000002920	prpf6	96	88.417	Takifugu_rubripes
ENSCCAG00000024564	PRPF6	100	81.712	ENSTNIG00000017873	prpf6	100	82.135	Tetraodon_nigroviridis
ENSCCAG00000024564	PRPF6	82	98.895	ENSTBEG00000005348	PRPF6	78	98.895	Tupaia_belangeri
ENSCCAG00000024564	PRPF6	100	93.836	ENSTTRG00000013068	PRPF6	100	93.730	Tursiops_truncatus
ENSCCAG00000024564	PRPF6	98	92.935	ENSUMAG00000021631	PRPF6	97	95.645	Ursus_maritimus
ENSCCAG00000024564	PRPF6	100	94.580	ENSVVUG00000014948	PRPF6	100	94.474	Vulpes_vulpes
ENSCCAG00000024564	PRPF6	100	91.923	ENSXETG00000012054	prpf6	97	92.349	Xenopus_tropicalis
ENSCCAG00000024564	PRPF6	100	89.267	ENSXCOG00000008082	prpf6	96	89.692	Xiphophorus_couchianus
ENSCCAG00000024564	PRPF6	100	89.267	ENSXMAG00000015581	prpf6	96	89.692	Xiphophorus_maculatus