EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000024567 (Gene tree)
Gene ID: 108300715
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 99558 bases
Position: chrKV389426.1:14846260-14945817
Accession: 108300715
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000014010	zf-C2H2	PF00096.26	1.2e-33	1	5
ENSCCAP00000014010	zf-C2H2	PF00096.26	1.2e-33	2	5
ENSCCAP00000014010	zf-C2H2	PF00096.26	1.2e-33	3	5
ENSCCAP00000014010	zf-C2H2	PF00096.26	1.2e-33	4	5
ENSCCAP00000014010	zf-C2H2	PF00096.26	1.2e-33	5	5
ENSCCAP00000013971	zf-C2H2	PF00096.26	4.9e-33	1	5
ENSCCAP00000013971	zf-C2H2	PF00096.26	4.9e-33	2	5
ENSCCAP00000013971	zf-C2H2	PF00096.26	4.9e-33	3	5
ENSCCAP00000013971	zf-C2H2	PF00096.26	4.9e-33	4	5
ENSCCAP00000013971	zf-C2H2	PF00096.26	4.9e-33	5	5
ENSCCAP00000013982	zf-C2H2	PF00096.26	5.1e-33	1	5
ENSCCAP00000013982	zf-C2H2	PF00096.26	5.1e-33	2	5
ENSCCAP00000013982	zf-C2H2	PF00096.26	5.1e-33	3	5
ENSCCAP00000013982	zf-C2H2	PF00096.26	5.1e-33	4	5
ENSCCAP00000013982	zf-C2H2	PF00096.26	5.1e-33	5	5
ENSCCAP00000014002	zf-C2H2	PF00096.26	4.8e-28	1	4
ENSCCAP00000014002	zf-C2H2	PF00096.26	4.8e-28	2	4
ENSCCAP00000014002	zf-C2H2	PF00096.26	4.8e-28	3	4
ENSCCAP00000014002	zf-C2H2	PF00096.26	4.8e-28	4	4
ENSCCAP00000013992	zf-C2H2	PF00096.26	1.1e-27	1	4
ENSCCAP00000013992	zf-C2H2	PF00096.26	1.1e-27	2	4
ENSCCAP00000013992	zf-C2H2	PF00096.26	1.1e-27	3	4
ENSCCAP00000013992	zf-C2H2	PF00096.26	1.1e-27	4	4
ENSCCAP00000014010	zf-met	PF12874.7	5.7e-06	1	2
ENSCCAP00000014010	zf-met	PF12874.7	5.7e-06	2	2
ENSCCAP00000014002	zf-met	PF12874.7	6.5e-06	1	2
ENSCCAP00000014002	zf-met	PF12874.7	6.5e-06	2	2
ENSCCAP00000013992	zf-met	PF12874.7	8.2e-06	1	2
ENSCCAP00000013992	zf-met	PF12874.7	8.2e-06	2	2
ENSCCAP00000013971	zf-met	PF12874.7	8.5e-06	1	2
ENSCCAP00000013971	zf-met	PF12874.7	8.5e-06	2	2
ENSCCAP00000013982	zf-met	PF12874.7	8.5e-06	1	2
ENSCCAP00000013982	zf-met	PF12874.7	8.5e-06	2	2
ENSCCAP00000014010	zf-C2H2_jaz	PF12171.8	2.3e-17	1	1
ENSCCAP00000013971	zf-C2H2_jaz	PF12171.8	9e-17	1	1
ENSCCAP00000013982	zf-C2H2_jaz	PF12171.8	9.2e-17	1	1
ENSCCAP00000014002	zf-C2H2_jaz	PF12171.8	8.2e-14	1	1
ENSCCAP00000013992	zf-C2H2_jaz	PF12171.8	1.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000031438	PRDM10-204	3201	-	ENSCCAP00000014002	1066 (aa)	-	A0A2K5QDM8
ENSCCAT00000031407	PRDM10-201	3763	XM_017523706	ENSCCAP00000013971	1155 (aa)	XP_017379195	A0A2K5QDJ7
ENSCCAT00000031446	PRDM10-205	3069	-	ENSCCAP00000014010	1022 (aa)	-	A0A2K5QDT2
ENSCCAT00000031418	PRDM10-202	3480	XM_017523643	ENSCCAP00000013982	1159 (aa)	XP_017379132	A0A2K5QDL3
ENSCCAT00000031428	PRDM10-203	3441	-	ENSCCAP00000013992	1146 (aa)	-	A0A2K5QDM2

Gene Model

Click here to download ENSCCAG00000024567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000024567's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000024567	PRDM10	65	30.806	ENSCCAG00000030489	PRDM15	77	31.492

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000024567	PRDM10	100	98.190	ENSG00000170325	PRDM10	100	98.382	Homo_sapiens
ENSCCAG00000024567	PRDM10	100	91.479	ENSAMEG00000002425	PRDM10	100	91.228	Ailuropoda_melanoleuca
ENSCCAG00000024567	PRDM10	100	85.013	ENSAPLG00000004858	PRDM10	100	85.013	Anas_platyrhynchos
ENSCCAG00000024567	PRDM10	100	90.695	ENSANAG00000022064	PRDM10	100	90.148	Aotus_nancymaae
ENSCCAG00000024567	PRDM10	100	93.615	ENSBTAG00000019001	PRDM10	100	94.118	Bos_taurus
ENSCCAG00000024567	PRDM10	100	99.310	ENSCJAG00000009235	PRDM10	100	99.310	Callithrix_jacchus
ENSCCAG00000024567	PRDM10	100	93.333	ENSCAFG00000010164	PRDM10	100	93.160	Canis_familiaris
ENSCCAG00000024567	PRDM10	100	92.177	ENSCAFG00020010152	PRDM10	100	92.007	Canis_lupus_dingo
ENSCCAG00000024567	PRDM10	100	93.939	ENSCHIG00000026530	PRDM10	100	93.333	Capra_hircus
ENSCCAG00000024567	PRDM10	100	97.500	ENSTSYG00000000544	PRDM10	100	97.845	Carlito_syrichta
ENSCCAG00000024567	PRDM10	100	85.702	ENSCAPG00000017296	PRDM10	98	87.928	Cavia_aperea
ENSCCAG00000024567	PRDM10	94	86.224	ENSCPOG00000000389	PRDM10	98	86.323	Cavia_porcellus
ENSCCAG00000024567	PRDM10	100	98.528	ENSCATG00000040031	PRDM10	100	98.528	Cercocebus_atys
ENSCCAG00000024567	PRDM10	100	91.859	ENSCLAG00000014605	PRDM10	99	97.403	Chinchilla_lanigera
ENSCCAG00000024567	PRDM10	100	98.615	ENSCSAG00000002202	PRDM10	100	98.615	Chlorocebus_sabaeus
ENSCCAG00000024567	PRDM10	100	82.656	ENSCPBG00000026880	PRDM10	99	82.241	Chrysemys_picta_bellii
ENSCCAG00000024567	PRDM10	100	98.447	ENSCANG00000032669	PRDM10	100	98.447	Colobus_angolensis_palliatus
ENSCCAG00000024567	PRDM10	100	92.573	ENSCGRG00001021647	Prdm10	98	92.401	Cricetulus_griseus_chok1gshd
ENSCCAG00000024567	PRDM10	100	92.573	ENSCGRG00000006562	Prdm10	98	92.401	Cricetulus_griseus_crigri
ENSCCAG00000024567	PRDM10	86	91.761	ENSDNOG00000001366	PRDM10	95	93.987	Dasypus_novemcinctus
ENSCCAG00000024567	PRDM10	100	94.026	ENSDORG00000014292	Prdm10	100	93.939	Dipodomys_ordii
ENSCCAG00000024567	PRDM10	100	94.978	ENSEASG00005022914	PRDM10	100	95.152	Equus_asinus_asinus
ENSCCAG00000024567	PRDM10	100	94.892	ENSECAG00000011499	PRDM10	100	95.065	Equus_caballus
ENSCCAG00000024567	PRDM10	98	95.234	ENSFCAG00000004111	PRDM10	96	94.969	Felis_catus
ENSCCAG00000024567	PRDM10	100	80.984	ENSFALG00000004873	PRDM10	100	80.484	Ficedula_albicollis
ENSCCAG00000024567	PRDM10	100	91.878	ENSFDAG00000017311	PRDM10	100	91.624	Fukomys_damarensis
ENSCCAG00000024567	PRDM10	100	82.098	ENSGALG00000033660	PRDM10	99	85.125	Gallus_gallus
ENSCCAG00000024567	PRDM10	92	67.901	ENSGACG00000012293	prdm10	99	67.901	Gasterosteus_aculeatus
ENSCCAG00000024567	PRDM10	100	83.791	ENSGAGG00000012523	PRDM10	99	83.705	Gopherus_agassizii
ENSCCAG00000024567	PRDM10	100	98.622	ENSGGOG00000015359	PRDM10	100	98.622	Gorilla_gorilla
ENSCCAG00000024567	PRDM10	100	91.908	ENSHGLG00000001106	PRDM10	100	92.078	Heterocephalus_glaber_female
ENSCCAG00000024567	PRDM10	100	92.321	ENSHGLG00100002350	PRDM10	100	92.406	Heterocephalus_glaber_male
ENSCCAG00000024567	PRDM10	100	96.364	ENSSTOG00000002015	PRDM10	100	96.364	Ictidomys_tridecemlineatus
ENSCCAG00000024567	PRDM10	98	88.737	ENSJJAG00000021493	Prdm10	90	92.901	Jaculus_jaculus
ENSCCAG00000024567	PRDM10	100	91.316	ENSLAFG00000031867	PRDM10	100	91.058	Loxodonta_africana
ENSCCAG00000024567	PRDM10	100	98.619	ENSMFAG00000031008	PRDM10	100	98.619	Macaca_fascicularis
ENSCCAG00000024567	PRDM10	100	98.619	ENSMMUG00000017555	PRDM10	100	98.619	Macaca_mulatta
ENSCCAG00000024567	PRDM10	100	98.533	ENSMNEG00000036493	PRDM10	100	98.533	Macaca_nemestrina
ENSCCAG00000024567	PRDM10	94	98.214	ENSMLEG00000042028	PRDM10	99	98.734	Mandrillus_leucophaeus
ENSCCAG00000024567	PRDM10	100	82.137	ENSMGAG00000001112	PRDM10	100	81.970	Meleagris_gallopavo
ENSCCAG00000024567	PRDM10	100	96.549	ENSMICG00000013888	PRDM10	100	96.549	Microcebus_murinus
ENSCCAG00000024567	PRDM10	100	90.955	ENSMOCG00000021853	Prdm10	100	90.617	Microtus_ochrogaster
ENSCCAG00000024567	PRDM10	81	84.163	ENSMODG00000004979	PRDM10	99	87.429	Monodelphis_domestica
ENSCCAG00000024567	PRDM10	100	91.098	ENSMUSG00000042496	Prdm10	100	90.838	Mus_musculus
ENSCCAG00000024567	PRDM10	100	92.937	MGP_SPRETEiJ_G0033061	-	100	92.679	Mus_spretus
ENSCCAG00000024567	PRDM10	100	94.978	ENSMPUG00000008711	PRDM10	99	94.719	Mustela_putorius_furo
ENSCCAG00000024567	PRDM10	100	93.960	ENSMLUG00000013051	PRDM10	100	93.960	Myotis_lucifugus
ENSCCAG00000024567	PRDM10	100	94.892	ENSNGAG00000000580	Prdm10	100	94.892	Nannospalax_galili
ENSCCAG00000024567	PRDM10	100	98.274	ENSNLEG00000007488	PRDM10	100	98.274	Nomascus_leucogenys
ENSCCAG00000024567	PRDM10	100	90.925	ENSODEG00000005309	PRDM10	99	94.805	Octodon_degus
ENSCCAG00000024567	PRDM10	100	80.750	ENSOANG00000000577	-	100	79.898	Ornithorhynchus_anatinus
ENSCCAG00000024567	PRDM10	100	93.333	ENSOCUG00000003736	PRDM10	100	93.333	Oryctolagus_cuniculus
ENSCCAG00000024567	PRDM10	100	94.909	ENSOGAG00000010723	PRDM10	100	94.478	Otolemur_garnettii
ENSCCAG00000024567	PRDM10	100	93.853	ENSOARG00000014507	PRDM10	100	93.247	Ovis_aries
ENSCCAG00000024567	PRDM10	100	98.536	ENSPPAG00000042881	PRDM10	100	98.536	Pan_paniscus
ENSCCAG00000024567	PRDM10	100	94.737	ENSPPRG00000007002	PRDM10	100	94.478	Panthera_pardus
ENSCCAG00000024567	PRDM10	100	94.651	ENSPTIG00000013331	PRDM10	100	94.392	Panthera_tigris_altaica
ENSCCAG00000024567	PRDM10	100	98.450	ENSPTRG00000004477	PRDM10	100	98.450	Pan_troglodytes
ENSCCAG00000024567	PRDM10	100	98.706	ENSPANG00000017470	PRDM10	100	98.706	Papio_anubis
ENSCCAG00000024567	PRDM10	100	91.582	ENSPEMG00000014985	Prdm10	100	91.156	Peromyscus_maniculatus_bairdii
ENSCCAG00000024567	PRDM10	100	98.616	ENSPPYG00000004061	PRDM10	100	98.616	Pongo_abelii
ENSCCAG00000024567	PRDM10	92	84.874	ENSPCAG00000014514	PRDM10	100	84.874	Procavia_capensis
ENSCCAG00000024567	PRDM10	100	81.888	ENSPCOG00000023406	PRDM10	100	82.530	Propithecus_coquereli
ENSCCAG00000024567	PRDM10	100	94.651	ENSPVAG00000012764	PRDM10	100	94.651	Pteropus_vampyrus
ENSCCAG00000024567	PRDM10	100	93.086	ENSRNOG00000007853	Prdm10	100	92.826	Rattus_norvegicus
ENSCCAG00000024567	PRDM10	100	98.448	ENSRBIG00000030924	PRDM10	100	98.448	Rhinopithecus_bieti
ENSCCAG00000024567	PRDM10	100	98.448	ENSRROG00000034334	PRDM10	100	98.448	Rhinopithecus_roxellana
ENSCCAG00000024567	PRDM10	100	99.316	ENSSBOG00000008773	PRDM10	100	99.316	Saimiri_boliviensis_boliviensis
ENSCCAG00000024567	PRDM10	99	87.091	ENSSHAG00000004503	PRDM10	99	87.177	Sarcophilus_harrisii
ENSCCAG00000024567	PRDM10	68	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSCCAG00000024567	PRDM10	100	81.100	ENSSPUG00000001178	PRDM10	97	84.724	Sphenodon_punctatus
ENSCCAG00000024567	PRDM10	100	92.839	ENSSSCG00000015243	PRDM10	98	94.082	Sus_scrofa
ENSCCAG00000024567	PRDM10	100	83.591	ENSTGUG00000000530	PRDM10	100	83.591	Taeniopygia_guttata
ENSCCAG00000024567	PRDM10	95	95.133	ENSTBEG00000007221	PRDM10	94	95.133	Tupaia_belangeri
ENSCCAG00000024567	PRDM10	100	91.027	ENSTTRG00000009189	PRDM10	100	90.509	Tursiops_truncatus
ENSCCAG00000024567	PRDM10	91	93.258	ENSUAMG00000018832	PRDM10	94	95.397	Ursus_americanus
ENSCCAG00000024567	PRDM10	100	92.900	ENSUMAG00000003167	PRDM10	99	95.274	Ursus_maritimus
ENSCCAG00000024567	PRDM10	100	94.372	ENSVVUG00000019878	PRDM10	100	94.199	Vulpes_vulpes
ENSCCAG00000024567	PRDM10	100	68.807	ENSXETG00000032173	PRDM10	100	68.807	Xenopus_tropicalis