EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000024756 (Gene tree)
Gene ID: 108314001
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 74162 bases
Position: chrKV389571.1:8088903-8163064
Accession: 108314001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000014242	ResIII	PF04851.15	6.3e-08	1	1
ENSCCAP00000014225	ResIII	PF04851.15	1.9e-07	1	1
ENSCCAP00000014220	ResIII	PF04851.15	1.9e-07	1	1
ENSCCAP00000014206	ResIII	PF04851.15	1.9e-07	1	1
ENSCCAP00000014178	ResIII	PF04851.15	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000031663	CHD5-204	5727	-	ENSCCAP00000014225	1908 (aa)	-	A0A2K5QEE1
ENSCCAT00000031680	CHD5-205	3648	-	ENSCCAP00000014242	1215 (aa)	-	A0A2K5QEC4
ENSCCAT00000031658	CHD5-203	5766	-	ENSCCAP00000014220	1921 (aa)	-	A0A2K5QED7
ENSCCAT00000031616	CHD5-201	6392	XM_017542705	ENSCCAP00000014178	1954 (aa)	XP_017398194	A0A2K5QE54
ENSCCAT00000031644	CHD5-202	5829	-	ENSCCAP00000014206	1942 (aa)	-	A0A2K5QE90

Gene Model

Click here to download ENSCCAG00000024756's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000024756's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000024756	CHD5	52	41.991	ENSCCAG00000035304	-	52	35.954
ENSCCAG00000024756	CHD5	94	71.474	ENSCCAG00000009686	-	97	71.201
ENSCCAG00000024756	CHD5	54	39.443	ENSCCAG00000036828	CHD6	88	41.300
ENSCCAG00000024756	CHD5	97	68.839	ENSCCAG00000034792	CHD3	92	68.672

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000024756	CHD5	100	98.669	ENSG00000116254	CHD5	100	98.669	Homo_sapiens
ENSCCAG00000024756	CHD5	99	95.848	ENSAMEG00000009880	CHD5	99	95.848	Ailuropoda_melanoleuca
ENSCCAG00000024756	CHD5	94	78.032	ENSACIG00000012582	chd5	98	77.658	Amphilophus_citrinellus
ENSCCAG00000024756	CHD5	94	79.001	ENSAOCG00000020356	chd5	90	78.256	Amphiprion_ocellaris
ENSCCAG00000024756	CHD5	94	80.844	ENSAPLG00000015475	CHD5	98	81.108	Anas_platyrhynchos
ENSCCAG00000024756	CHD5	99	82.437	ENSACAG00000002441	CHD5	99	82.332	Anolis_carolinensis
ENSCCAG00000024756	CHD5	87	99.231	ENSANAG00000001078	CHD5	91	99.231	Aotus_nancymaae
ENSCCAG00000024756	CHD5	94	74.973	ENSACLG00000003012	chd5	96	74.444	Astatotilapia_calliptera
ENSCCAG00000024756	CHD5	86	80.405	ENSAMXG00000008921	chd5	94	86.957	Astyanax_mexicanus
ENSCCAG00000024756	CHD5	93	96.700	ENSBTAG00000040477	CHD5	100	96.700	Bos_taurus
ENSCCAG00000024756	CHD5	100	99.181	ENSCJAG00000000101	CHD5	100	99.181	Callithrix_jacchus
ENSCCAG00000024756	CHD5	93	96.973	ENSCAFG00000019545	CHD5	100	96.973	Canis_familiaris
ENSCCAG00000024756	CHD5	99	96.568	ENSCAFG00020008689	CHD5	97	96.568	Canis_lupus_dingo
ENSCCAG00000024756	CHD5	99	94.396	ENSCHIG00000015027	CHD5	98	93.886	Capra_hircus
ENSCCAG00000024756	CHD5	98	91.649	ENSTSYG00000033991	CHD5	99	91.975	Carlito_syrichta
ENSCCAG00000024756	CHD5	99	95.330	ENSCAPG00000009294	CHD5	99	95.322	Cavia_aperea
ENSCCAG00000024756	CHD5	99	95.330	ENSCPOG00000025080	CHD5	99	95.322	Cavia_porcellus
ENSCCAG00000024756	CHD5	100	97.902	ENSCATG00000043011	CHD5	100	97.902	Cercocebus_atys
ENSCCAG00000024756	CHD5	99	95.113	ENSCLAG00000010589	CHD5	99	94.907	Chinchilla_lanigera
ENSCCAG00000024756	CHD5	100	98.874	ENSCSAG00000000733	CHD5	100	98.874	Chlorocebus_sabaeus
ENSCCAG00000024756	CHD5	93	90.839	ENSCPBG00000019363	CHD5	100	90.730	Chrysemys_picta_bellii
ENSCCAG00000024756	CHD5	99	98.860	ENSCANG00000032302	CHD5	99	98.860	Colobus_angolensis_palliatus
ENSCCAG00000024756	CHD5	85	92.925	ENSCGRG00001011042	Chd5	100	96.415	Cricetulus_griseus_chok1gshd
ENSCCAG00000024756	CHD5	99	94.611	ENSCGRG00000011341	Chd5	99	94.595	Cricetulus_griseus_crigri
ENSCCAG00000024756	CHD5	94	66.632	ENSDARG00000025789	chd4b	90	80.660	Danio_rerio
ENSCCAG00000024756	CHD5	96	76.827	ENSDARG00000105083	chd5	97	79.845	Danio_rerio
ENSCCAG00000024756	CHD5	100	91.607	ENSDNOG00000046342	CHD5	100	91.505	Dasypus_novemcinctus
ENSCCAG00000024756	CHD5	99	95.697	ENSDORG00000005923	Chd5	99	95.691	Dipodomys_ordii
ENSCCAG00000024756	CHD5	99	94.877	ENSEASG00005021464	CHD5	99	96.735	Equus_asinus_asinus
ENSCCAG00000024756	CHD5	99	94.467	ENSECAG00000025043	CHD5	98	97.942	Equus_caballus
ENSCCAG00000024756	CHD5	77	99.070	ENSEEUG00000002772	CHD5	77	99.070	Erinaceus_europaeus
ENSCCAG00000024756	CHD5	94	79.743	ENSELUG00000010742	chd5	93	92.417	Esox_lucius
ENSCCAG00000024756	CHD5	100	96.162	ENSFCAG00000006319	CHD5	100	96.162	Felis_catus
ENSCCAG00000024756	CHD5	99	88.171	ENSFALG00000009740	CHD5	99	88.302	Ficedula_albicollis
ENSCCAG00000024756	CHD5	99	94.930	ENSFDAG00000012881	CHD5	95	94.953	Fukomys_damarensis
ENSCCAG00000024756	CHD5	100	87.653	ENSGALG00000000747	CHD5	100	87.245	Gallus_gallus
ENSCCAG00000024756	CHD5	78	83.577	ENSGACG00000004389	chd5	93	82.708	Gasterosteus_aculeatus
ENSCCAG00000024756	CHD5	96	88.377	ENSGAGG00000001590	CHD5	99	95.610	Gopherus_agassizii
ENSCCAG00000024756	CHD5	99	98.703	ENSGGOG00000000708	CHD5	100	98.703	Gorilla_gorilla
ENSCCAG00000024756	CHD5	94	76.563	ENSHBUG00000013453	chd5	96	76.035	Haplochromis_burtoni
ENSCCAG00000024756	CHD5	100	95.394	ENSHGLG00000018184	CHD5	100	95.394	Heterocephalus_glaber_female
ENSCCAG00000024756	CHD5	99	88.671	ENSHGLG00100013261	CHD5	97	88.958	Heterocephalus_glaber_male
ENSCCAG00000024756	CHD5	94	77.977	ENSIPUG00000005446	chd5	97	78.019	Ictalurus_punctatus
ENSCCAG00000024756	CHD5	99	96.421	ENSSTOG00000002778	CHD5	100	94.603	Ictidomys_tridecemlineatus
ENSCCAG00000024756	CHD5	100	95.292	ENSJJAG00000019072	Chd5	100	95.138	Jaculus_jaculus
ENSCCAG00000024756	CHD5	59	89.403	ENSLACG00000022233	-	99	88.081	Latimeria_chalumnae
ENSCCAG00000024756	CHD5	96	81.775	ENSLOCG00000004944	chd5	94	80.895	Lepisosteus_oculatus
ENSCCAG00000024756	CHD5	99	96.781	ENSLAFG00000006348	CHD5	99	96.781	Loxodonta_africana
ENSCCAG00000024756	CHD5	99	98.756	ENSMFAG00000033993	CHD5	100	99.009	Macaca_fascicularis
ENSCCAG00000024756	CHD5	99	98.807	ENSMMUG00000016838	CHD5	99	98.807	Macaca_mulatta
ENSCCAG00000024756	CHD5	100	98.925	ENSMNEG00000040044	CHD5	100	98.925	Macaca_nemestrina
ENSCCAG00000024756	CHD5	99	95.289	ENSMLEG00000039166	CHD5	100	95.289	Mandrillus_leucophaeus
ENSCCAG00000024756	CHD5	94	74.703	ENSMZEG00005000841	chd5	91	79.701	Maylandia_zebra
ENSCCAG00000024756	CHD5	99	87.506	ENSMGAG00000001055	CHD5	99	87.353	Meleagris_gallopavo
ENSCCAG00000024756	CHD5	100	93.003	ENSMICG00000017862	CHD5	100	93.003	Microcebus_murinus
ENSCCAG00000024756	CHD5	100	94.729	ENSMOCG00000011049	Chd5	100	94.729	Microtus_ochrogaster
ENSCCAG00000024756	CHD5	82	94.226	ENSMODG00000006294	CHD5	78	94.226	Monodelphis_domestica
ENSCCAG00000024756	CHD5	94	77.862	ENSMALG00000002831	chd5	96	77.303	Monopterus_albus
ENSCCAG00000024756	CHD5	100	94.524	MGP_CAROLIEiJ_G0026857	Chd5	100	94.524	Mus_caroli
ENSCCAG00000024756	CHD5	100	94.124	ENSMUSG00000005045	Chd5	100	94.021	Mus_musculus
ENSCCAG00000024756	CHD5	100	94.371	MGP_PahariEiJ_G0029205	Chd5	100	94.371	Mus_pahari
ENSCCAG00000024756	CHD5	100	94.422	MGP_SPRETEiJ_G0027850	Chd5	100	94.422	Mus_spretus
ENSCCAG00000024756	CHD5	98	96.167	ENSMPUG00000007122	CHD5	98	95.153	Mustela_putorius_furo
ENSCCAG00000024756	CHD5	99	94.346	ENSNGAG00000019812	Chd5	96	94.381	Nannospalax_galili
ENSCCAG00000024756	CHD5	99	96.473	ENSNLEG00000010320	CHD5	100	96.264	Nomascus_leucogenys
ENSCCAG00000024756	CHD5	87	89.354	ENSOPRG00000004304	CHD5	87	89.231	Ochotona_princeps
ENSCCAG00000024756	CHD5	99	95.174	ENSODEG00000010262	CHD5	99	95.166	Octodon_degus
ENSCCAG00000024756	CHD5	91	79.587	ENSONIG00000000619	chd5	93	75.998	Oreochromis_niloticus
ENSCCAG00000024756	CHD5	96	72.265	ENSOANG00000001819	CHD5	98	71.584	Ornithorhynchus_anatinus
ENSCCAG00000024756	CHD5	99	94.982	ENSOGAG00000005703	CHD5	99	94.982	Otolemur_garnettii
ENSCCAG00000024756	CHD5	97	95.190	ENSOARG00000013425	CHD5	97	95.228	Ovis_aries
ENSCCAG00000024756	CHD5	99	98.703	ENSPPAG00000034048	CHD5	100	98.703	Pan_paniscus
ENSCCAG00000024756	CHD5	100	95.548	ENSPPRG00000009453	CHD5	100	95.548	Panthera_pardus
ENSCCAG00000024756	CHD5	99	88.520	ENSPTIG00000013926	CHD5	99	88.588	Panthera_tigris_altaica
ENSCCAG00000024756	CHD5	100	98.670	ENSPTRG00000000075	CHD5	100	98.670	Pan_troglodytes
ENSCCAG00000024756	CHD5	100	98.874	ENSPANG00000006765	CHD5	100	98.874	Papio_anubis
ENSCCAG00000024756	CHD5	94	78.481	ENSPKIG00000004282	chd5	93	92.417	Paramormyrops_kingsleyae
ENSCCAG00000024756	CHD5	95	82.996	ENSPSIG00000006414	CHD5	99	83.245	Pelodiscus_sinensis
ENSCCAG00000024756	CHD5	89	92.294	ENSPEMG00000014799	Chd5	100	96.171	Peromyscus_maniculatus_bairdii
ENSCCAG00000024756	CHD5	99	91.783	ENSPCIG00000028310	CHD5	100	90.121	Phascolarctos_cinereus
ENSCCAG00000024756	CHD5	88	85.897	ENSPLAG00000005343	chd5	74	80.611	Poecilia_latipinna
ENSCCAG00000024756	CHD5	96	96.923	ENSPPYG00000001952	CHD5	99	96.923	Pongo_abelii
ENSCCAG00000024756	CHD5	100	97.441	ENSPCOG00000022930	CHD5	100	97.441	Propithecus_coquereli
ENSCCAG00000024756	CHD5	94	78.223	ENSPNYG00000003183	chd5	89	87.149	Pundamilia_nyererei
ENSCCAG00000024756	CHD5	100	94.729	ENSRNOG00000011268	Chd5	100	94.575	Rattus_norvegicus
ENSCCAG00000024756	CHD5	98	96.881	ENSRBIG00000032140	CHD5	97	96.881	Rhinopithecus_bieti
ENSCCAG00000024756	CHD5	99	98.547	ENSRROG00000041146	CHD5	99	98.547	Rhinopithecus_roxellana
ENSCCAG00000024756	CHD5	99	94.859	ENSSBOG00000001955	CHD5	100	99.288	Saimiri_boliviensis_boliviensis
ENSCCAG00000024756	CHD5	96	86.378	ENSSHAG00000018641	CHD5	99	86.325	Sarcophilus_harrisii
ENSCCAG00000024756	CHD5	97	77.224	ENSSFOG00015006296	chd5	92	87.352	Scleropages_formosus
ENSCCAG00000024756	CHD5	94	78.916	ENSSDUG00000017526	chd5	92	91.469	Seriola_dumerili
ENSCCAG00000024756	CHD5	97	81.030	ENSSPUG00000010622	CHD5	98	80.998	Sphenodon_punctatus
ENSCCAG00000024756	CHD5	98	96.761	ENSSSCG00000003366	CHD5	100	96.863	Sus_scrofa
ENSCCAG00000024756	CHD5	93	83.568	ENSTGUG00000002634	-	100	83.316	Taeniopygia_guttata
ENSCCAG00000024756	CHD5	81	78.424	ENSTNIG00000004346	chd5	99	81.354	Tetraodon_nigroviridis
ENSCCAG00000024756	CHD5	100	93.501	ENSTTRG00000010468	CHD5	100	93.654	Tursiops_truncatus
ENSCCAG00000024756	CHD5	98	96.806	ENSUAMG00000024509	CHD5	98	96.806	Ursus_americanus
ENSCCAG00000024756	CHD5	98	91.671	ENSUMAG00000024173	CHD5	98	92.911	Ursus_maritimus
ENSCCAG00000024756	CHD5	99	94.661	ENSVVUG00000026480	CHD5	99	94.464	Vulpes_vulpes
ENSCCAG00000024756	CHD5	96	79.226	ENSXETG00000002904	chd5	100	78.505	Xenopus_tropicalis
ENSCCAG00000024756	CHD5	86	75.187	ENSXCOG00000014202	chd5	95	83.871	Xiphophorus_couchianus