EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000024760 (Gene tree)
Gene ID: 108300439
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 64358 bases
Position: chrKV389453.1:3895738-3960095
Accession: 108300439
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000013959	Rif1_N	PF12231.8	2.9e-62	1	2
ENSCCAP00000013959	Rif1_N	PF12231.8	2.9e-62	2	2
ENSCCAP00000013968	Rif1_N	PF12231.8	3.2e-62	1	2
ENSCCAP00000013968	Rif1_N	PF12231.8	3.2e-62	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000031404	RIF1-202	7236	XM_017523213	ENSCCAP00000013968	2411 (aa)	XP_017378702	A0A2K5QDJ5
ENSCCAT00000031395	RIF1-201	10068	XM_017523212	ENSCCAP00000013959	2437 (aa)	XP_017378701	A0A2K5QDK8

Gene Model

Click here to download ENSCCAG00000024760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000024760's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000024760	RIF1	100	89.406	ENSG00000080345	RIF1	100	89.567	Homo_sapiens
ENSCCAG00000024760	RIF1	51	46.397	ENSAPOG00000011073	rif1	50	46.318	Acanthochromis_polyacanthus
ENSCCAG00000024760	RIF1	99	78.427	ENSAMEG00000008461	RIF1	100	78.347	Ailuropoda_melanoleuca
ENSCCAG00000024760	RIF1	65	48.174	ENSACIG00000017765	rif1	73	48.096	Amphilophus_citrinellus
ENSCCAG00000024760	RIF1	64	46.571	ENSAOCG00000017231	rif1	64	46.491	Amphiprion_ocellaris
ENSCCAG00000024760	RIF1	66	51.636	ENSAPEG00000013228	rif1	65	51.574	Amphiprion_percula
ENSCCAG00000024760	RIF1	65	47.045	ENSATEG00000022887	rif1	65	46.518	Anabas_testudineus
ENSCCAG00000024760	RIF1	84	67.055	ENSAPLG00000007092	RIF1	92	66.764	Anas_platyrhynchos
ENSCCAG00000024760	RIF1	84	57.143	ENSACAG00000003714	RIF1	90	57.143	Anolis_carolinensis
ENSCCAG00000024760	RIF1	100	93.563	ENSANAG00000024840	RIF1	100	93.563	Aotus_nancymaae
ENSCCAG00000024760	RIF1	63	43.884	ENSAMXG00000010910	rif1	52	49.805	Astyanax_mexicanus
ENSCCAG00000024760	RIF1	94	76.172	ENSBTAG00000021020	RIF1	99	76.172	Bos_taurus
ENSCCAG00000024760	RIF1	100	92.996	ENSCJAG00000003138	RIF1	100	92.996	Callithrix_jacchus
ENSCCAG00000024760	RIF1	100	76.490	ENSCAFG00000005670	RIF1	97	76.419	Canis_familiaris
ENSCCAG00000024760	RIF1	100	75.877	ENSCAFG00020016401	RIF1	100	75.806	Canis_lupus_dingo
ENSCCAG00000024760	RIF1	99	76.532	ENSCHIG00000020327	RIF1	99	76.532	Capra_hircus
ENSCCAG00000024760	RIF1	99	77.894	ENSTSYG00000008861	RIF1	100	77.894	Carlito_syrichta
ENSCCAG00000024760	RIF1	79	86.047	ENSCAPG00000008957	RIF1	99	75.116	Cavia_aperea
ENSCCAG00000024760	RIF1	99	69.352	ENSCPOG00000037898	RIF1	99	69.392	Cavia_porcellus
ENSCCAG00000024760	RIF1	100	88.997	ENSCATG00000033353	RIF1	100	88.997	Cercocebus_atys
ENSCCAG00000024760	RIF1	96	71.841	ENSCLAG00000001517	RIF1	99	71.662	Chinchilla_lanigera
ENSCCAG00000024760	RIF1	100	89.078	ENSCSAG00000016089	RIF1	100	89.078	Chlorocebus_sabaeus
ENSCCAG00000024760	RIF1	98	78.788	ENSCHOG00000007187	RIF1	97	78.788	Choloepus_hoffmanni
ENSCCAG00000024760	RIF1	90	72.781	ENSCPBG00000025885	RIF1	96	73.964	Chrysemys_picta_bellii
ENSCCAG00000024760	RIF1	100	87.348	ENSCANG00000028962	RIF1	100	88.588	Colobus_angolensis_palliatus
ENSCCAG00000024760	RIF1	99	69.011	ENSCGRG00001024589	Rif1	100	69.011	Cricetulus_griseus_chok1gshd
ENSCCAG00000024760	RIF1	99	70.151	ENSCGRG00000010713	Rif1	100	70.151	Cricetulus_griseus_crigri
ENSCCAG00000024760	RIF1	59	58.079	ENSCSEG00000003945	rif1	63	58.079	Cynoglossus_semilaevis
ENSCCAG00000024760	RIF1	63	47.229	ENSCVAG00000022479	rif1	68	47.229	Cyprinodon_variegatus
ENSCCAG00000024760	RIF1	62	49.598	ENSDARG00000062650	rif1	65	49.560	Danio_rerio
ENSCCAG00000024760	RIF1	99	75.446	ENSDNOG00000011194	RIF1	97	75.486	Dasypus_novemcinctus
ENSCCAG00000024760	RIF1	91	70.023	ENSETEG00000012421	RIF1	92	70.023	Echinops_telfairi
ENSCCAG00000024760	RIF1	92	90.566	ENSEASG00005023434	RIF1	99	90.566	Equus_asinus_asinus
ENSCCAG00000024760	RIF1	96	85.520	ENSECAG00000012679	RIF1	100	85.520	Equus_caballus
ENSCCAG00000024760	RIF1	62	49.247	ENSELUG00000006826	rif1	56	48.854	Esox_lucius
ENSCCAG00000024760	RIF1	100	77.062	ENSFCAG00000029742	RIF1	100	77.183	Felis_catus
ENSCCAG00000024760	RIF1	79	59.946	ENSFALG00000013874	RIF1	93	60.490	Ficedula_albicollis
ENSCCAG00000024760	RIF1	99	73.395	ENSFDAG00000006538	RIF1	99	73.314	Fukomys_damarensis
ENSCCAG00000024760	RIF1	62	48.323	ENSFHEG00000013721	rif1	65	48.298	Fundulus_heteroclitus
ENSCCAG00000024760	RIF1	52	52.747	ENSGMOG00000003517	rif1	80	52.747	Gadus_morhua
ENSCCAG00000024760	RIF1	79	66.471	ENSGALG00000012484	RIF1	91	66.471	Gallus_gallus
ENSCCAG00000024760	RIF1	62	48.867	ENSGAFG00000017196	rif1	65	51.359	Gambusia_affinis
ENSCCAG00000024760	RIF1	59	55.285	ENSGACG00000008579	rif1	66	54.800	Gasterosteus_aculeatus
ENSCCAG00000024760	RIF1	85	73.054	ENSGAGG00000012595	RIF1	93	74.251	Gopherus_agassizii
ENSCCAG00000024760	RIF1	90	90.987	ENSGGOG00000040178	RIF1	96	90.987	Gorilla_gorilla
ENSCCAG00000024760	RIF1	63	43.593	ENSHBUG00000007125	rif1	55	48.913	Haplochromis_burtoni
ENSCCAG00000024760	RIF1	94	73.413	ENSHGLG00100009807	RIF1	99	73.370	Heterocephalus_glaber_male
ENSCCAG00000024760	RIF1	62	46.922	ENSHCOG00000015943	rif1	59	46.918	Hippocampus_comes
ENSCCAG00000024760	RIF1	61	51.768	ENSIPUG00000021703	rif1	63	51.768	Ictalurus_punctatus
ENSCCAG00000024760	RIF1	100	76.143	ENSSTOG00000020712	RIF1	100	76.143	Ictidomys_tridecemlineatus
ENSCCAG00000024760	RIF1	99	68.321	ENSJJAG00000023000	Rif1	100	68.362	Jaculus_jaculus
ENSCCAG00000024760	RIF1	64	47.161	ENSKMAG00000002852	rif1	67	47.161	Kryptolebias_marmoratus
ENSCCAG00000024760	RIF1	60	52.330	ENSLBEG00000023196	rif1	58	52.330	Labrus_bergylta
ENSCCAG00000024760	RIF1	85	63.988	ENSLACG00000005425	RIF1	89	63.988	Latimeria_chalumnae
ENSCCAG00000024760	RIF1	62	52.791	ENSLOCG00000002657	rif1	71	52.711	Lepisosteus_oculatus
ENSCCAG00000024760	RIF1	99	75.635	ENSLAFG00000009796	RIF1	100	75.635	Loxodonta_africana
ENSCCAG00000024760	RIF1	100	89.078	ENSMFAG00000032233	RIF1	100	89.078	Macaca_fascicularis
ENSCCAG00000024760	RIF1	100	89.037	ENSMMUG00000008611	RIF1	100	89.037	Macaca_mulatta
ENSCCAG00000024760	RIF1	100	88.997	ENSMNEG00000031616	RIF1	100	88.997	Macaca_nemestrina
ENSCCAG00000024760	RIF1	100	89.118	ENSMLEG00000042945	RIF1	100	89.118	Mandrillus_leucophaeus
ENSCCAG00000024760	RIF1	57	51.220	ENSMAMG00000001745	rif1	60	51.085	Mastacembelus_armatus
ENSCCAG00000024760	RIF1	63	48.943	ENSMZEG00005020920	rif1	69	48.708	Maylandia_zebra
ENSCCAG00000024760	RIF1	84	61.708	ENSMGAG00000012732	RIF1	92	61.708	Meleagris_gallopavo
ENSCCAG00000024760	RIF1	94	80.501	ENSMAUG00000013158	Rif1	99	80.501	Mesocricetus_auratus
ENSCCAG00000024760	RIF1	100	82.453	ENSMICG00000046127	RIF1	100	82.453	Microcebus_murinus
ENSCCAG00000024760	RIF1	99	69.592	ENSMOCG00000009381	Rif1	100	69.592	Microtus_ochrogaster
ENSCCAG00000024760	RIF1	66	47.424	ENSMMOG00000006519	rif1	64	49.080	Mola_mola
ENSCCAG00000024760	RIF1	100	59.383	ENSMODG00000003703	RIF1	100	59.166	Monodelphis_domestica
ENSCCAG00000024760	RIF1	63	47.360	ENSMALG00000016759	rif1	72	47.440	Monopterus_albus
ENSCCAG00000024760	RIF1	99	67.730	MGP_CAROLIEiJ_G0023555	Rif1	100	67.811	Mus_caroli
ENSCCAG00000024760	RIF1	99	68.516	ENSMUSG00000036202	Rif1	100	68.597	Mus_musculus
ENSCCAG00000024760	RIF1	99	66.640	MGP_PahariEiJ_G0025006	Rif1	100	66.640	Mus_pahari
ENSCCAG00000024760	RIF1	99	68.415	MGP_SPRETEiJ_G0024476	Rif1	100	68.415	Mus_spretus
ENSCCAG00000024760	RIF1	100	77.527	ENSMPUG00000000371	RIF1	100	77.527	Mustela_putorius_furo
ENSCCAG00000024760	RIF1	91	76.733	ENSMLUG00000003376	RIF1	99	76.733	Myotis_lucifugus
ENSCCAG00000024760	RIF1	100	71.808	ENSNGAG00000009268	Rif1	100	71.808	Nannospalax_galili
ENSCCAG00000024760	RIF1	62	49.034	ENSNBRG00000014257	rif1	69	49.091	Neolamprologus_brichardi
ENSCCAG00000024760	RIF1	100	88.609	ENSNLEG00000010955	RIF1	100	88.771	Nomascus_leucogenys
ENSCCAG00000024760	RIF1	77	73.770	ENSMEUG00000007601	-	83	73.770	Notamacropus_eugenii
ENSCCAG00000024760	RIF1	99	71.625	ENSODEG00000003950	RIF1	99	71.908	Octodon_degus
ENSCCAG00000024760	RIF1	63	43.939	ENSONIG00000013657	rif1	60	48.176	Oreochromis_niloticus
ENSCCAG00000024760	RIF1	84	67.518	ENSOANG00000006078	-	86	67.518	Ornithorhynchus_anatinus
ENSCCAG00000024760	RIF1	100	75.071	ENSOCUG00000017435	RIF1	100	75.071	Oryctolagus_cuniculus
ENSCCAG00000024760	RIF1	64	47.092	ENSORLG00020001302	rif1	69	46.528	Oryzias_latipes_hni
ENSCCAG00000024760	RIF1	64	47.097	ENSORLG00015000009	rif1	69	47.097	Oryzias_latipes_hsok
ENSCCAG00000024760	RIF1	63	46.704	ENSOMEG00000021513	rif1	68	46.534	Oryzias_melastigma
ENSCCAG00000024760	RIF1	99	79.064	ENSOGAG00000006141	RIF1	99	79.024	Otolemur_garnettii
ENSCCAG00000024760	RIF1	99	76.452	ENSOARG00000008930	RIF1	99	76.452	Ovis_aries
ENSCCAG00000024760	RIF1	100	89.369	ENSPPAG00000023754	RIF1	100	89.369	Pan_paniscus
ENSCCAG00000024760	RIF1	100	77.072	ENSPPRG00000003618	RIF1	100	77.233	Panthera_pardus
ENSCCAG00000024760	RIF1	100	77.112	ENSPTIG00000020652	RIF1	100	77.273	Panthera_tigris_altaica
ENSCCAG00000024760	RIF1	100	89.450	ENSPTRG00000012534	RIF1	100	89.450	Pan_troglodytes
ENSCCAG00000024760	RIF1	100	88.754	ENSPANG00000008525	RIF1	100	88.754	Papio_anubis
ENSCCAG00000024760	RIF1	63	44.118	ENSPMGG00000016141	rif1	76	44.118	Periophthalmus_magnuspinnatus
ENSCCAG00000024760	RIF1	99	69.984	ENSPEMG00000000446	Rif1	99	69.943	Peromyscus_maniculatus_bairdii
ENSCCAG00000024760	RIF1	99	58.680	ENSPCIG00000009185	RIF1	99	58.715	Phascolarctos_cinereus
ENSCCAG00000024760	RIF1	55	49.191	ENSPFOG00000000554	-	63	49.191	Poecilia_formosa
ENSCCAG00000024760	RIF1	62	49.359	ENSPFOG00000017804	rif1	66	49.480	Poecilia_formosa
ENSCCAG00000024760	RIF1	62	49.195	ENSPLAG00000017945	rif1	68	49.195	Poecilia_latipinna
ENSCCAG00000024760	RIF1	53	49.154	ENSPMEG00000006897	-	61	49.154	Poecilia_mexicana
ENSCCAG00000024760	RIF1	62	49.476	ENSPREG00000018052	rif1	65	51.677	Poecilia_reticulata
ENSCCAG00000024760	RIF1	100	89.284	ENSPPYG00000012846	RIF1	100	89.446	Pongo_abelii
ENSCCAG00000024760	RIF1	82	86.139	ENSPCAG00000009032	RIF1	83	86.139	Procavia_capensis
ENSCCAG00000024760	RIF1	100	82.453	ENSPCOG00000027888	RIF1	100	82.453	Propithecus_coquereli
ENSCCAG00000024760	RIF1	93	83.333	ENSPVAG00000014276	RIF1	95	83.333	Pteropus_vampyrus
ENSCCAG00000024760	RIF1	63	47.702	ENSPNYG00000012940	rif1	68	47.536	Pundamilia_nyererei
ENSCCAG00000024760	RIF1	68	48.352	ENSPNAG00000016685	rif1	51	50.156	Pygocentrus_nattereri
ENSCCAG00000024760	RIF1	99	66.962	ENSRNOG00000054901	Rif1	100	66.962	Rattus_norvegicus
ENSCCAG00000024760	RIF1	100	88.071	ENSRBIG00000003704	RIF1	100	88.233	Rhinopithecus_bieti
ENSCCAG00000024760	RIF1	100	89.123	ENSRROG00000028206	RIF1	100	89.284	Rhinopithecus_roxellana
ENSCCAG00000024760	RIF1	100	90.660	ENSSBOG00000029530	RIF1	100	90.660	Saimiri_boliviensis_boliviensis
ENSCCAG00000024760	RIF1	99	58.198	ENSSHAG00000018552	RIF1	99	58.118	Sarcophilus_harrisii
ENSCCAG00000024760	RIF1	62	51.373	ENSSFOG00015021539	rif1	70	50.962	Scleropages_formosus
ENSCCAG00000024760	RIF1	67	47.901	ENSSMAG00000011704	rif1	70	48.018	Scophthalmus_maximus
ENSCCAG00000024760	RIF1	63	48.688	ENSSDUG00000015632	rif1	71	48.688	Seriola_dumerili
ENSCCAG00000024760	RIF1	63	49.045	ENSSLDG00000019531	rif1	68	47.368	Seriola_lalandi_dorsalis
ENSCCAG00000024760	RIF1	63	83.051	ENSSARG00000007161	-	64	83.051	Sorex_araneus
ENSCCAG00000024760	RIF1	88	70.659	ENSSPUG00000003062	RIF1	95	70.659	Sphenodon_punctatus
ENSCCAG00000024760	RIF1	100	77.236	ENSSSCG00000016395	RIF1	100	77.236	Sus_scrofa
ENSCCAG00000024760	RIF1	63	47.857	ENSTRUG00000015808	rif1	69	47.510	Takifugu_rubripes
ENSCCAG00000024760	RIF1	68	47.733	ENSTNIG00000011538	rif1	73	47.733	Tetraodon_nigroviridis
ENSCCAG00000024760	RIF1	83	89.873	ENSTBEG00000016082	RIF1	82	89.873	Tupaia_belangeri
ENSCCAG00000024760	RIF1	100	78.292	ENSTTRG00000011190	RIF1	100	78.252	Tursiops_truncatus
ENSCCAG00000024760	RIF1	91	79.101	ENSUAMG00000026385	RIF1	99	79.011	Ursus_americanus
ENSCCAG00000024760	RIF1	96	84.645	ENSUMAG00000000337	RIF1	99	84.645	Ursus_maritimus
ENSCCAG00000024760	RIF1	100	76.179	ENSVPAG00000002162	RIF1	100	76.309	Vicugna_pacos
ENSCCAG00000024760	RIF1	100	76.210	ENSVVUG00000011293	RIF1	100	76.008	Vulpes_vulpes
ENSCCAG00000024760	RIF1	58	63.746	ENSXETG00000004530	rif1	72	63.746	Xenopus_tropicalis
ENSCCAG00000024760	RIF1	62	47.335	ENSXMAG00000000506	rif1	63	47.494	Xiphophorus_maculatus