EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000024952 (Gene tree)
Gene ID: 108311386
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 102029 bases
Position: chrKV389432.1:10029873-10131901
Accession: 108311386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000014541	RRM_1	PF00076.22	4.2e-09	1	1
ENSCCAP00000014536	RRM_1	PF00076.22	4.2e-09	1	1
ENSCCAP00000014579	RRM_1	PF00076.22	4.3e-09	1	1
ENSCCAP00000014567	RRM_1	PF00076.22	4.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000031980	SCAF8-202	4659	XM_017538783	ENSCCAP00000014541	1292 (aa)	XP_017394272	A0A2K5QF68
ENSCCAT00000032006	SCAF8-203	4011	-	ENSCCAP00000014567	1336 (aa)	-	A0A2K5QF99
ENSCCAT00000032018	SCAF8-204	3828	-	ENSCCAP00000014579	1275 (aa)	-	A0A2K5QFC7
ENSCCAT00000031975	SCAF8-201	5005	XM_017538792	ENSCCAP00000014536	1271 (aa)	XP_017394281	A0A2K5QF63

Gene Model

Click here to download ENSCCAG00000024952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000024952's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000024952	SCAF8	100	98.375	ENSG00000213079	SCAF8	100	98.348	Homo_sapiens
ENSCCAG00000024952	SCAF8	87	68.825	ENSAPOG00000015527	SCAF8	77	68.345	Acanthochromis_polyacanthus
ENSCCAG00000024952	SCAF8	100	95.588	ENSAMEG00000007583	SCAF8	97	95.588	Ailuropoda_melanoleuca
ENSCCAG00000024952	SCAF8	87	68.825	ENSAOCG00000002421	SCAF8	76	68.345	Amphiprion_ocellaris
ENSCCAG00000024952	SCAF8	88	65.865	ENSATEG00000006959	SCAF8	97	65.223	Anabas_testudineus
ENSCCAG00000024952	SCAF8	100	79.345	ENSAPLG00000005765	SCAF8	100	79.267	Anas_platyrhynchos
ENSCCAG00000024952	SCAF8	99	74.921	ENSACAG00000005282	SCAF8	99	74.744	Anolis_carolinensis
ENSCCAG00000024952	SCAF8	100	99.226	ENSANAG00000036184	SCAF8	100	99.213	Aotus_nancymaae
ENSCCAG00000024952	SCAF8	86	69.428	ENSACLG00000018828	SCAF8	80	68.902	Astatotilapia_calliptera
ENSCCAG00000024952	SCAF8	100	94.571	ENSBTAG00000031917	SCAF8	100	94.571	Bos_taurus
ENSCCAG00000024952	SCAF8	100	98.916	ENSCJAG00000012631	SCAF8	97	98.916	Callithrix_jacchus
ENSCCAG00000024952	SCAF8	99	95.649	ENSCAFG00000000570	SCAF8	100	95.741	Canis_familiaris
ENSCCAG00000024952	SCAF8	99	95.645	ENSCAFG00020015048	SCAF8	99	95.580	Canis_lupus_dingo
ENSCCAG00000024952	SCAF8	100	94.493	ENSCHIG00000025041	SCAF8	100	94.493	Capra_hircus
ENSCCAG00000024952	SCAF8	99	96.412	ENSTSYG00000010991	SCAF8	98	96.412	Carlito_syrichta
ENSCCAG00000024952	SCAF8	65	97.414	ENSCAPG00000003300	SCAF8	85	97.368	Cavia_aperea
ENSCCAG00000024952	SCAF8	99	86.967	ENSCPOG00000022216	-	99	86.177	Cavia_porcellus
ENSCCAG00000024952	SCAF8	100	98.452	ENSCATG00000035361	SCAF8	100	98.426	Cercocebus_atys
ENSCCAG00000024952	SCAF8	100	94.025	ENSCLAG00000004910	SCAF8	100	94.532	Chinchilla_lanigera
ENSCCAG00000024952	SCAF8	100	98.607	ENSCSAG00000013430	SCAF8	100	98.607	Chlorocebus_sabaeus
ENSCCAG00000024952	SCAF8	100	75.221	ENSCPBG00000016330	SCAF8	100	80.065	Chrysemys_picta_bellii
ENSCCAG00000024952	SCAF8	100	98.297	ENSCANG00000039499	SCAF8	99	98.297	Colobus_angolensis_palliatus
ENSCCAG00000024952	SCAF8	100	91.824	ENSCGRG00001020167	Scaf8	100	91.824	Cricetulus_griseus_chok1gshd
ENSCCAG00000024952	SCAF8	99	91.686	ENSCGRG00000004120	Scaf8	99	91.759	Cricetulus_griseus_crigri
ENSCCAG00000024952	SCAF8	87	65.904	ENSCSEG00000000043	-	78	66.988	Cynoglossus_semilaevis
ENSCCAG00000024952	SCAF8	82	66.754	ENSCVAG00000000925	SCAF8	77	66.230	Cyprinodon_variegatus
ENSCCAG00000024952	SCAF8	96	89.336	ENSDNOG00000025271	SCAF8	100	92.945	Dasypus_novemcinctus
ENSCCAG00000024952	SCAF8	99	92.744	ENSDORG00000006391	Scaf8	100	92.587	Dipodomys_ordii
ENSCCAG00000024952	SCAF8	100	95.898	ENSEASG00005018879	SCAF8	100	95.898	Equus_asinus_asinus
ENSCCAG00000024952	SCAF8	100	95.975	ENSECAG00000005540	SCAF8	100	95.975	Equus_caballus
ENSCCAG00000024952	SCAF8	88	64.884	ENSELUG00000002779	SCAF8	75	64.871	Esox_lucius
ENSCCAG00000024952	SCAF8	100	96.145	ENSFCAG00000023424	SCAF8	100	96.145	Felis_catus
ENSCCAG00000024952	SCAF8	100	78.972	ENSFALG00000012433	SCAF8	100	79.222	Ficedula_albicollis
ENSCCAG00000024952	SCAF8	99	95.087	ENSFDAG00000010335	SCAF8	99	95.087	Fukomys_damarensis
ENSCCAG00000024952	SCAF8	92	68.804	ENSFHEG00000008284	SCAF8	77	68.311	Fundulus_heteroclitus
ENSCCAG00000024952	SCAF8	59	68.651	ENSGMOG00000018812	SCAF8	66	70.635	Gadus_morhua
ENSCCAG00000024952	SCAF8	99	79.907	ENSGALG00000013635	SCAF8	99	79.517	Gallus_gallus
ENSCCAG00000024952	SCAF8	85	68.550	ENSGAFG00000018033	SCAF8	78	65.111	Gambusia_affinis
ENSCCAG00000024952	SCAF8	93	53.966	ENSGACG00000006909	SCAF8	100	54.865	Gasterosteus_aculeatus
ENSCCAG00000024952	SCAF8	63	72.537	ENSGAGG00000017820	-	88	72.537	Gopherus_agassizii
ENSCCAG00000024952	SCAF8	100	98.348	ENSGGOG00000008645	SCAF8	100	98.348	Gorilla_gorilla
ENSCCAG00000024952	SCAF8	86	69.306	ENSHBUG00000019537	SCAF8	80	68.780	Haplochromis_burtoni
ENSCCAG00000024952	SCAF8	100	95.047	ENSHGLG00000003619	SCAF8	100	95.047	Heterocephalus_glaber_female
ENSCCAG00000024952	SCAF8	100	94.418	ENSHGLG00100004708	SCAF8	100	95.008	Heterocephalus_glaber_male
ENSCCAG00000024952	SCAF8	99	95.570	ENSSTOG00000026043	SCAF8	100	95.662	Ictidomys_tridecemlineatus
ENSCCAG00000024952	SCAF8	100	92.453	ENSJJAG00000020480	Scaf8	100	92.453	Jaculus_jaculus
ENSCCAG00000024952	SCAF8	87	68.351	ENSKMAG00000012767	SCAF8	78	67.870	Kryptolebias_marmoratus
ENSCCAG00000024952	SCAF8	62	76.296	ENSLBEG00000012484	-	59	76.429	Labrus_bergylta
ENSCCAG00000024952	SCAF8	88	75.518	ENSLACG00000001394	SCAF8	99	73.006	Latimeria_chalumnae
ENSCCAG00000024952	SCAF8	100	61.454	ENSLOCG00000016856	SCAF8	100	60.516	Lepisosteus_oculatus
ENSCCAG00000024952	SCAF8	100	92.773	ENSLAFG00000000022	SCAF8	100	93.323	Loxodonta_africana
ENSCCAG00000024952	SCAF8	100	98.607	ENSMFAG00000032738	SCAF8	100	98.584	Macaca_fascicularis
ENSCCAG00000024952	SCAF8	100	98.607	ENSMMUG00000015163	SCAF8	100	98.584	Macaca_mulatta
ENSCCAG00000024952	SCAF8	100	98.607	ENSMNEG00000043466	SCAF8	100	98.584	Macaca_nemestrina
ENSCCAG00000024952	SCAF8	99	98.440	ENSMLEG00000034845	SCAF8	100	98.440	Mandrillus_leucophaeus
ENSCCAG00000024952	SCAF8	83	65.478	ENSMAMG00000009457	SCAF8	76	64.586	Mastacembelus_armatus
ENSCCAG00000024952	SCAF8	86	69.306	ENSMZEG00005005698	SCAF8	80	68.780	Maylandia_zebra
ENSCCAG00000024952	SCAF8	99	79.938	ENSMGAG00000012762	SCAF8	100	79.705	Meleagris_gallopavo
ENSCCAG00000024952	SCAF8	99	91.284	ENSMAUG00000009513	Scaf8	100	91.284	Mesocricetus_auratus
ENSCCAG00000024952	SCAF8	100	96.056	ENSMICG00000028965	SCAF8	100	96.056	Microcebus_murinus
ENSCCAG00000024952	SCAF8	100	92.296	ENSMOCG00000014950	Scaf8	100	92.296	Microtus_ochrogaster
ENSCCAG00000024952	SCAF8	84	65.102	ENSMMOG00000002216	SCAF8	78	64.086	Mola_mola
ENSCCAG00000024952	SCAF8	99	86.640	ENSMODG00000008301	SCAF8	100	86.761	Monodelphis_domestica
ENSCCAG00000024952	SCAF8	87	67.866	ENSMALG00000011584	SCAF8	78	68.402	Monopterus_albus
ENSCCAG00000024952	SCAF8	100	91.424	MGP_CAROLIEiJ_G0021016	Scaf8	100	91.424	Mus_caroli
ENSCCAG00000024952	SCAF8	100	91.424	ENSMUSG00000046201	Scaf8	100	91.424	Mus_musculus
ENSCCAG00000024952	SCAF8	100	92.132	MGP_PahariEiJ_G0023334	Scaf8	100	92.132	Mus_pahari
ENSCCAG00000024952	SCAF8	100	95.356	ENSMPUG00000001974	SCAF8	100	95.356	Mustela_putorius_furo
ENSCCAG00000024952	SCAF8	100	93.391	ENSMLUG00000029190	SCAF8	100	93.391	Myotis_lucifugus
ENSCCAG00000024952	SCAF8	100	93.003	ENSNGAG00000012332	Scaf8	100	93.003	Nannospalax_galili
ENSCCAG00000024952	SCAF8	96	63.201	ENSNBRG00000009067	SCAF8	100	63.201	Neolamprologus_brichardi
ENSCCAG00000024952	SCAF8	100	97.490	ENSNLEG00000015509	SCAF8	99	98.101	Nomascus_leucogenys
ENSCCAG00000024952	SCAF8	70	92.857	ENSOPRG00000018413	-	76	93.939	Ochotona_princeps
ENSCCAG00000024952	SCAF8	100	94.658	ENSODEG00000007296	SCAF8	100	94.658	Octodon_degus
ENSCCAG00000024952	SCAF8	100	55.359	ENSONIG00000008119	SCAF8	99	55.306	Oreochromis_niloticus
ENSCCAG00000024952	SCAF8	99	96.044	ENSOCUG00000026063	SCAF8	100	96.136	Oryctolagus_cuniculus
ENSCCAG00000024952	SCAF8	86	69.051	ENSORLG00000017358	SCAF8	78	68.927	Oryzias_latipes
ENSCCAG00000024952	SCAF8	86	69.174	ENSORLG00020002214	SCAF8	78	67.788	Oryzias_latipes_hni
ENSCCAG00000024952	SCAF8	86	69.297	ENSORLG00015015779	SCAF8	78	69.174	Oryzias_latipes_hsok
ENSCCAG00000024952	SCAF8	86	69.174	ENSOMEG00000015471	SCAF8	77	66.053	Oryzias_melastigma
ENSCCAG00000024952	SCAF8	100	96.130	ENSOGAG00000034223	SCAF8	97	96.130	Otolemur_garnettii
ENSCCAG00000024952	SCAF8	99	94.295	ENSOARG00000004159	SCAF8	100	94.295	Ovis_aries
ENSCCAG00000024952	SCAF8	100	98.190	ENSPPAG00000039826	SCAF8	100	98.190	Pan_paniscus
ENSCCAG00000024952	SCAF8	100	96.223	ENSPPRG00000023175	SCAF8	100	96.223	Panthera_pardus
ENSCCAG00000024952	SCAF8	99	96.120	ENSPTIG00000014836	SCAF8	100	96.120	Panthera_tigris_altaica
ENSCCAG00000024952	SCAF8	100	98.220	ENSPTRG00000018727	SCAF8	100	98.190	Pan_troglodytes
ENSCCAG00000024952	SCAF8	100	98.452	ENSPANG00000017489	SCAF8	100	96.764	Papio_anubis
ENSCCAG00000024952	SCAF8	100	56.672	ENSPKIG00000021212	SCAF8	100	56.777	Paramormyrops_kingsleyae
ENSCCAG00000024952	SCAF8	89	74.142	ENSPSIG00000008614	SCAF8	95	77.226	Pelodiscus_sinensis
ENSCCAG00000024952	SCAF8	99	92.076	ENSPEMG00000010531	Scaf8	100	92.076	Peromyscus_maniculatus_bairdii
ENSCCAG00000024952	SCAF8	100	87.431	ENSPCIG00000001141	SCAF8	100	87.431	Phascolarctos_cinereus
ENSCCAG00000024952	SCAF8	100	54.539	ENSPFOG00000004176	SCAF8	100	54.264	Poecilia_formosa
ENSCCAG00000024952	SCAF8	85	69.051	ENSPLAG00000021432	SCAF8	77	68.434	Poecilia_latipinna
ENSCCAG00000024952	SCAF8	85	69.297	ENSPMEG00000007591	SCAF8	84	68.129	Poecilia_mexicana
ENSCCAG00000024952	SCAF8	85	69.051	ENSPREG00000000652	SCAF8	77	68.434	Poecilia_reticulata
ENSCCAG00000024952	SCAF8	100	96.865	ENSPPYG00000017121	SCAF8	100	96.865	Pongo_abelii
ENSCCAG00000024952	SCAF8	85	96.985	ENSPCAG00000013044	SCAF8	90	96.985	Procavia_capensis
ENSCCAG00000024952	SCAF8	100	96.056	ENSPCOG00000002067	SCAF8	99	95.563	Propithecus_coquereli
ENSCCAG00000024952	SCAF8	99	92.252	ENSPVAG00000005582	SCAF8	100	93.291	Pteropus_vampyrus
ENSCCAG00000024952	SCAF8	86	69.428	ENSPNYG00000007277	SCAF8	80	68.902	Pundamilia_nyererei
ENSCCAG00000024952	SCAF8	86	68.299	ENSPNAG00000024740	SCAF8	82	68.666	Pygocentrus_nattereri
ENSCCAG00000024952	SCAF8	100	91.581	ENSRNOG00000016919	Scaf8	100	91.581	Rattus_norvegicus
ENSCCAG00000024952	SCAF8	100	98.348	ENSRBIG00000035769	SCAF8	100	98.348	Rhinopithecus_bieti
ENSCCAG00000024952	SCAF8	100	98.269	ENSRROG00000013580	SCAF8	100	98.269	Rhinopithecus_roxellana
ENSCCAG00000024952	SCAF8	100	99.056	ENSSBOG00000027023	SCAF8	100	99.056	Saimiri_boliviensis_boliviensis
ENSCCAG00000024952	SCAF8	100	86.735	ENSSHAG00000009915	SCAF8	100	86.499	Sarcophilus_harrisii
ENSCCAG00000024952	SCAF8	100	54.420	ENSSFOG00015009481	SCAF8	93	70.526	Scleropages_formosus
ENSCCAG00000024952	SCAF8	87	67.947	ENSSMAG00000008275	SCAF8	77	67.347	Scophthalmus_maximus
ENSCCAG00000024952	SCAF8	100	77.644	ENSSPUG00000015219	SCAF8	100	77.660	Sphenodon_punctatus
ENSCCAG00000024952	SCAF8	100	95.830	ENSSSCG00000004070	SCAF8	100	95.830	Sus_scrofa
ENSCCAG00000024952	SCAF8	99	80.503	ENSTGUG00000011151	SCAF8	100	80.739	Taeniopygia_guttata
ENSCCAG00000024952	SCAF8	85	67.857	ENSTRUG00000009243	SCAF8	78	67.611	Takifugu_rubripes
ENSCCAG00000024952	SCAF8	87	65.139	ENSTNIG00000016885	SCAF8	99	67.020	Tetraodon_nigroviridis
ENSCCAG00000024952	SCAF8	99	94.607	ENSTTRG00000014538	SCAF8	100	94.607	Tursiops_truncatus
ENSCCAG00000024952	SCAF8	100	95.515	ENSUAMG00000024736	SCAF8	99	95.480	Ursus_americanus
ENSCCAG00000024952	SCAF8	98	95.506	ENSUMAG00000013404	SCAF8	100	95.506	Ursus_maritimus
ENSCCAG00000024952	SCAF8	66	84.767	ENSVPAG00000012465	SCAF8	99	84.180	Vicugna_pacos
ENSCCAG00000024952	SCAF8	99	95.724	ENSVVUG00000007532	SCAF8	100	95.817	Vulpes_vulpes
ENSCCAG00000024952	SCAF8	100	61.485	ENSXETG00000013132	scaf8	100	61.503	Xenopus_tropicalis
ENSCCAG00000024952	SCAF8	85	69.174	ENSXMAG00000019192	SCAF8	78	68.557	Xiphophorus_maculatus