EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000025074 (Gene tree)
Gene ID: 108310059
Gene Symbol: -
Alias: -
Full Name: matrin 3
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 43026 bases
Position: chrKV389527.1:322258-365283
Accession: 108310059
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000015226	RRM_5	PF13893.6	6.9e-07	1	2
ENSCCAP00000015226	RRM_5	PF13893.6	6.9e-07	2	2
ENSCCAP00000015134	RRM_5	PF13893.6	8.4e-07	1	2
ENSCCAP00000015134	RRM_5	PF13893.6	8.4e-07	2	2
ENSCCAP00000015219	RRM_5	PF13893.6	2.5e-06	1	1
ENSCCAP00000015115	RRM_5	PF13893.6	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000032578	-	2925	XM_017536713	ENSCCAP00000015134	559 (aa)	XP_017392202	A0A2K5QGX2
ENSCCAT00000032663	-	2529	-	ENSCCAP00000015219	842 (aa)	-	A0A2K5QH61
ENSCCAT00000032628	-	852	-	ENSCCAP00000015184	283 (aa)	-	A0A2K5QH24
ENSCCAT00000032670	-	1563	-	ENSCCAP00000015226	520 (aa)	-	A0A2K5QH66
ENSCCAT00000032559	-	6572	XM_017536706	ENSCCAP00000015115	847 (aa)	XP_017392195	A0A2K5QGX1

Gene Model

Click here to download ENSCCAG00000025074's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000025074's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000025074	-	100	99.174	ENSG00000015479	MATR3	100	100.000	Homo_sapiens
ENSCCAG00000025074	-	99	98.456	ENSAMEG00000011347	-	100	93.527	Ailuropoda_melanoleuca
ENSCCAG00000025074	-	99	81.576	ENSAPLG00000008118	-	94	80.256	Anas_platyrhynchos
ENSCCAG00000025074	-	99	72.632	ENSACAG00000016233	-	99	71.590	Anolis_carolinensis
ENSCCAG00000025074	-	84	72.826	ENSANAG00000024654	-	99	72.826	Aotus_nancymaae
ENSCCAG00000025074	-	100	99.646	ENSANAG00000022951	-	100	99.646	Aotus_nancymaae
ENSCCAG00000025074	-	54	53.623	ENSACLG00000015903	matr3l1.1	62	57.143	Astatotilapia_calliptera
ENSCCAG00000025074	-	95	32.731	ENSAMXG00000010681	matr3l1.1	82	33.585	Astyanax_mexicanus
ENSCCAG00000025074	-	84	33.663	ENSAMXG00000010685	matr3l1.1	81	39.706	Astyanax_mexicanus
ENSCCAG00000025074	-	100	98.223	ENSBTAG00000006756	MATR3	100	98.223	Bos_taurus
ENSCCAG00000025074	-	100	99.642	ENSCJAG00000006888	-	100	99.642	Callithrix_jacchus
ENSCCAG00000025074	-	100	98.233	ENSCAFG00000001345	MATR3	100	98.233	Canis_familiaris
ENSCCAG00000025074	-	100	98.104	ENSCAFG00020010504	-	100	98.104	Canis_lupus_dingo
ENSCCAG00000025074	-	100	98.469	ENSCHIG00000025746	-	100	98.469	Capra_hircus
ENSCCAG00000025074	-	100	98.819	ENSTSYG00000011028	-	100	98.819	Carlito_syrichta
ENSCCAG00000025074	-	99	98.463	ENSCPOG00000014076	-	99	98.463	Cavia_porcellus
ENSCCAG00000025074	-	100	98.927	ENSCATG00000041304	-	100	98.927	Cercocebus_atys
ENSCCAG00000025074	-	99	98.582	ENSCLAG00000015998	-	99	98.582	Chinchilla_lanigera
ENSCCAG00000025074	-	100	99.410	ENSCSAG00000013075	-	100	99.410	Chlorocebus_sabaeus
ENSCCAG00000025074	-	99	80.210	ENSCPBG00000006303	-	94	80.326	Chrysemys_picta_bellii
ENSCCAG00000025074	-	99	99.048	ENSCANG00000028224	-	100	97.993	Colobus_angolensis_palliatus
ENSCCAG00000025074	-	100	98.347	ENSCGRG00001020227	Matr3	100	98.347	Cricetulus_griseus_chok1gshd
ENSCCAG00000025074	-	100	98.229	ENSCGRG00000011298	Matr3	100	98.229	Cricetulus_griseus_crigri
ENSCCAG00000025074	-	97	32.143	ENSCSEG00000012682	matr3l1.1	81	32.143	Cynoglossus_semilaevis
ENSCCAG00000025074	-	76	31.900	ENSCVAG00000005337	matr3l1.1	81	34.940	Cyprinodon_variegatus
ENSCCAG00000025074	-	99	97.983	ENSDNOG00000037723	-	100	93.096	Dasypus_novemcinctus
ENSCCAG00000025074	-	100	98.704	ENSEASG00005020857	-	100	98.704	Equus_asinus_asinus
ENSCCAG00000025074	-	100	98.587	ENSECAG00000012882	MATR3	100	98.587	Equus_caballus
ENSCCAG00000025074	-	74	42.718	ENSELUG00000021651	si:ch211-271b14.1	86	42.718	Esox_lucius
ENSCCAG00000025074	-	94	30.176	ENSELUG00000021848	matr3l1.1	75	51.515	Esox_lucius
ENSCCAG00000025074	-	100	98.587	ENSFCAG00000021911	-	100	98.587	Felis_catus
ENSCCAG00000025074	-	99	79.210	ENSFALG00000003071	-	94	79.094	Ficedula_albicollis
ENSCCAG00000025074	-	100	97.639	ENSFDAG00000017675	-	100	97.639	Fukomys_damarensis
ENSCCAG00000025074	-	99	81.141	ENSGALG00000002478	MATR3	94	79.860	Gallus_gallus
ENSCCAG00000025074	-	99	80.023	ENSGAGG00000011386	-	94	80.139	Gopherus_agassizii
ENSCCAG00000025074	-	100	99.292	ENSGGOG00000007308	-	100	99.292	Gorilla_gorilla
ENSCCAG00000025074	-	100	98.819	ENSHGLG00000004673	MATR3	100	98.819	Heterocephalus_glaber_female
ENSCCAG00000025074	-	96	97.988	ENSHGLG00100006442	-	100	98.232	Heterocephalus_glaber_male
ENSCCAG00000025074	-	55	37.222	ENSHCOG00000013223	matr3l1.1	83	30.269	Hippocampus_comes
ENSCCAG00000025074	-	100	98.822	ENSSTOG00000014746	-	100	98.822	Ictidomys_tridecemlineatus
ENSCCAG00000025074	-	100	97.403	ENSJJAG00000021710	-	100	97.403	Jaculus_jaculus
ENSCCAG00000025074	-	96	69.339	ENSJJAG00000011022	-	100	69.276	Jaculus_jaculus
ENSCCAG00000025074	-	63	43.210	ENSLBEG00000018267	matr3l1.1	76	35.081	Labrus_bergylta
ENSCCAG00000025074	-	99	56.164	ENSLACG00000006743	-	99	57.112	Latimeria_chalumnae
ENSCCAG00000025074	-	100	99.287	ENSMFAG00000000634	-	100	99.287	Macaca_fascicularis
ENSCCAG00000025074	-	60	97.024	ENSMMUG00000015963	-	99	97.024	Macaca_mulatta
ENSCCAG00000025074	-	100	99.106	ENSMMUG00000016741	MATR3	100	99.106	Macaca_mulatta
ENSCCAG00000025074	-	100	99.528	ENSMNEG00000042856	-	100	99.528	Macaca_nemestrina
ENSCCAG00000025074	-	100	99.528	ENSMLEG00000041178	-	100	99.528	Mandrillus_leucophaeus
ENSCCAG00000025074	-	75	48.235	ENSMAMG00000013840	matr3l1.1	75	41.880	Mastacembelus_armatus
ENSCCAG00000025074	-	99	81.024	ENSMGAG00000001331	-	94	79.744	Meleagris_gallopavo
ENSCCAG00000025074	-	100	98.111	ENSMAUG00000011647	Matr3	100	98.111	Mesocricetus_auratus
ENSCCAG00000025074	-	98	97.436	ENSMICG00000012438	-	100	97.436	Microcebus_murinus
ENSCCAG00000025074	-	100	98.111	ENSMOCG00000015711	Matr3	100	98.111	Microtus_ochrogaster
ENSCCAG00000025074	-	100	90.867	ENSMODG00000011925	-	99	89.110	Monodelphis_domestica
ENSCCAG00000025074	-	100	98.229	MGP_CAROLIEiJ_G0022108	Matr3	100	98.229	Mus_caroli
ENSCCAG00000025074	-	100	98.229	ENSMUSG00000037236	Matr3	100	98.229	Mus_musculus
ENSCCAG00000025074	-	100	98.229	MGP_PahariEiJ_G0018842	Matr3	100	98.229	Mus_pahari
ENSCCAG00000025074	-	100	97.875	MGP_SPRETEiJ_G0023020	Matr3	100	97.875	Mus_spretus
ENSCCAG00000025074	-	100	96.991	ENSMPUG00000009297	-	100	96.991	Mustela_putorius_furo
ENSCCAG00000025074	-	100	97.529	ENSMLUG00000005798	-	99	97.529	Myotis_lucifugus
ENSCCAG00000025074	-	100	98.347	ENSNGAG00000017452	Matr3	100	98.347	Nannospalax_galili
ENSCCAG00000025074	-	100	99.528	ENSNLEG00000009093	-	100	99.528	Nomascus_leucogenys
ENSCCAG00000025074	-	99	93.333	ENSOPRG00000016511	-	100	90.847	Ochotona_princeps
ENSCCAG00000025074	-	99	98.227	ENSODEG00000003015	-	99	98.227	Octodon_degus
ENSCCAG00000025074	-	100	98.701	ENSOCUG00000026311	MATR3	100	98.701	Oryctolagus_cuniculus
ENSCCAG00000025074	-	87	33.333	ENSORLG00020009362	matr3l1.1	80	33.333	Oryzias_latipes_hni
ENSCCAG00000025074	-	63	48.148	ENSORLG00015018551	matr3l1.1	80	33.333	Oryzias_latipes_hsok
ENSCCAG00000025074	-	70	32.812	ENSOMEG00000022287	matr3l1.1	80	32.305	Oryzias_melastigma
ENSCCAG00000025074	-	100	99.292	ENSOGAG00000010607	-	100	99.292	Otolemur_garnettii
ENSCCAG00000025074	-	100	98.469	ENSOARG00000016931	-	99	98.469	Ovis_aries
ENSCCAG00000025074	-	100	91.234	ENSPPAG00000026720	-	99	93.248	Pan_paniscus
ENSCCAG00000025074	-	100	99.050	ENSPPAG00000001418	-	100	99.050	Pan_paniscus
ENSCCAG00000025074	-	100	98.704	ENSPPRG00000008004	-	100	98.704	Panthera_pardus
ENSCCAG00000025074	-	98	97.278	ENSPTIG00000010711	-	100	98.768	Panthera_tigris_altaica
ENSCCAG00000025074	-	100	99.050	ENSPTRG00000017294	MATR3	100	99.050	Pan_troglodytes
ENSCCAG00000025074	-	100	99.106	ENSPANG00000012018	-	100	99.106	Papio_anubis
ENSCCAG00000025074	-	99	97.482	ENSPANG00000032489	-	99	98.905	Papio_anubis
ENSCCAG00000025074	-	96	32.743	ENSPKIG00000000333	matr3l1.1	76	33.585	Paramormyrops_kingsleyae
ENSCCAG00000025074	-	99	80.698	ENSPSIG00000014598	-	94	80.581	Pelodiscus_sinensis
ENSCCAG00000025074	-	100	97.993	ENSPEMG00000020679	Matr3	100	97.993	Peromyscus_maniculatus_bairdii
ENSCCAG00000025074	-	99	99.167	ENSPPYG00000015835	-	100	94.190	Pongo_abelii
ENSCCAG00000025074	-	100	98.937	ENSPCOG00000025718	-	100	98.937	Propithecus_coquereli
ENSCCAG00000025074	-	99	98.690	ENSPVAG00000015431	-	96	98.690	Pteropus_vampyrus
ENSCCAG00000025074	-	58	45.455	ENSPNYG00000015855	-	89	45.455	Pundamilia_nyererei
ENSCCAG00000025074	-	100	97.757	ENSRNOG00000019875	Matr3	100	97.757	Rattus_norvegicus
ENSCCAG00000025074	-	100	99.106	ENSRBIG00000034713	-	100	99.106	Rhinopithecus_bieti
ENSCCAG00000025074	-	100	97.639	ENSRROG00000043949	-	100	97.639	Rhinopithecus_roxellana
ENSCCAG00000025074	-	100	99.106	ENSRROG00000039415	-	100	99.214	Rhinopithecus_roxellana
ENSCCAG00000025074	-	100	99.882	ENSSBOG00000030159	-	100	99.882	Saimiri_boliviensis_boliviensis
ENSCCAG00000025074	-	100	90.984	ENSSHAG00000010331	-	99	89.227	Sarcophilus_harrisii
ENSCCAG00000025074	-	62	55.556	ENSSDUG00000015369	matr3l1.1	59	51.471	Seriola_dumerili
ENSCCAG00000025074	-	99	79.350	ENSSPUG00000019236	-	99	75.028	Sphenodon_punctatus
ENSCCAG00000025074	-	100	98.587	ENSSSCG00000014343	-	100	98.587	Sus_scrofa
ENSCCAG00000025074	-	99	80.000	ENSTGUG00000014568	MATR3	94	79.186	Taeniopygia_guttata
ENSCCAG00000025074	-	51	37.327	ENSTRUG00000001692	-	81	35.317	Takifugu_rubripes
ENSCCAG00000025074	-	61	57.143	ENSTNIG00000003166	matr3l1.1	71	57.143	Tetraodon_nigroviridis
ENSCCAG00000025074	-	85	98.470	ENSUAMG00000000097	-	97	98.470	Ursus_americanus
ENSCCAG00000025074	-	100	98.115	ENSUMAG00000015808	-	100	98.115	Ursus_maritimus
ENSCCAG00000025074	-	99	98.104	ENSVPAG00000006337	-	100	92.992	Vicugna_pacos
ENSCCAG00000025074	-	100	98.469	ENSVVUG00000020287	-	100	98.469	Vulpes_vulpes
ENSCCAG00000025074	-	99	54.556	ENSXETG00000003838	matr3	94	53.988	Xenopus_tropicalis
ENSCCAG00000025074	-	68	34.343	ENSXMAG00000014107	-	70	57.143	Xiphophorus_maculatus