EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000025114 (Gene tree)
Gene ID: 108315260
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 23
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 18843 bases
Position: chrKV389596.1:1437435-1456277
Accession: 108315260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000014636	RRM_1	PF00076.22	8.3e-35	1	2
ENSCCAP00000014636	RRM_1	PF00076.22	8.3e-35	2	2
ENSCCAP00000014627	RRM_1	PF00076.22	9.5e-35	1	2
ENSCCAP00000014627	RRM_1	PF00076.22	9.5e-35	2	2
ENSCCAP00000014630	RRM_1	PF00076.22	1.1e-34	1	2
ENSCCAP00000014630	RRM_1	PF00076.22	1.1e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000032077	-	1215	-	ENSCCAP00000014636	404 (aa)	-	A0A2K5QFG3
ENSCCAT00000032071	-	2738	XM_017544501	ENSCCAP00000014630	438 (aa)	XP_017399990	A0A2K5QFJ8
ENSCCAT00000032068	-	2518	XM_017544503	ENSCCAP00000014627	422 (aa)	XP_017399992	A0A2K5QFG0

Gene Model

Click here to download ENSCCAG00000025114's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000025114's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000025114	-	52	36.667	ENSCCAG00000033927	MSI2	78	36.667
ENSCCAG00000025114	-	98	47.685	ENSCCAG00000035313	-	82	51.376
ENSCCAG00000025114	-	98	57.816	ENSCCAG00000031689	-	74	70.956
ENSCCAG00000025114	-	100	79.909	ENSCCAG00000028584	-	100	82.528

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000025114	-	100	95.556	ENSG00000100461	RBM23	100	100.000	Homo_sapiens
ENSCCAG00000025114	-	100	85.556	ENSAMEG00000007322	RBM23	100	88.444	Ailuropoda_melanoleuca
ENSCCAG00000025114	-	75	81.957	ENSACAG00000001569	RBM23	96	70.241	Anolis_carolinensis
ENSCCAG00000025114	-	100	76.027	ENSANAG00000033790	-	100	74.201	Aotus_nancymaae
ENSCCAG00000025114	-	100	85.745	ENSBTAG00000038333	RBM23	100	80.562	Bos_taurus
ENSCCAG00000025114	-	100	95.444	ENSCJAG00000008482	RBM23	100	94.989	Callithrix_jacchus
ENSCCAG00000025114	-	100	85.176	ENSCAFG00000011217	RBM23	100	85.647	Canis_familiaris
ENSCCAG00000025114	-	100	88.764	ENSCAFG00020007711	RBM23	100	89.213	Canis_lupus_dingo
ENSCCAG00000025114	-	100	87.257	ENSCHIG00000025709	RBM23	100	80.562	Capra_hircus
ENSCCAG00000025114	-	100	90.380	ENSTSYG00000014755	RBM23	100	97.770	Carlito_syrichta
ENSCCAG00000025114	-	100	93.409	ENSCATG00000017832	RBM23	100	95.636	Cercocebus_atys
ENSCCAG00000025114	-	100	91.629	ENSCSAG00000016213	RBM23	100	91.176	Chlorocebus_sabaeus
ENSCCAG00000025114	-	78	74.922	ENSCPBG00000026096	RBM23	96	69.284	Chrysemys_picta_bellii
ENSCCAG00000025114	-	95	92.804	ENSCANG00000001893	RBM23	100	92.804	Colobus_angolensis_palliatus
ENSCCAG00000025114	-	100	87.162	ENSDNOG00000032457	RBM23	100	86.036	Dasypus_novemcinctus
ENSCCAG00000025114	-	67	97.026	ENSDORG00000004926	-	100	97.026	Dipodomys_ordii
ENSCCAG00000025114	-	58	80.000	ENSETEG00000017915	-	91	80.000	Echinops_telfairi
ENSCCAG00000025114	-	96	86.279	ENSEASG00005011696	RBM23	95	83.953	Equus_asinus_asinus
ENSCCAG00000025114	-	100	84.793	ENSECAG00000009910	RBM23	100	86.175	Equus_caballus
ENSCCAG00000025114	-	100	83.371	ENSEEUG00000015560	RBM23	100	83.371	Erinaceus_europaeus
ENSCCAG00000025114	-	100	86.292	ENSFCAG00000006632	RBM23	100	88.764	Felis_catus
ENSCCAG00000025114	-	100	93.853	ENSGGOG00000015707	RBM23	100	94.090	Gorilla_gorilla
ENSCCAG00000025114	-	100	82.432	ENSHGLG00100006114	RBM23	99	83.108	Heterocephalus_glaber_male
ENSCCAG00000025114	-	67	97.770	ENSSTOG00000010354	RBM23	100	97.770	Ictidomys_tridecemlineatus
ENSCCAG00000025114	-	100	86.130	ENSLAFG00000018567	RBM23	100	84.116	Loxodonta_africana
ENSCCAG00000025114	-	100	93.439	ENSMFAG00000037595	RBM23	100	92.986	Macaca_fascicularis
ENSCCAG00000025114	-	100	93.439	ENSMMUG00000018381	RBM23	100	92.290	Macaca_mulatta
ENSCCAG00000025114	-	100	93.409	ENSMNEG00000042442	RBM23	100	93.636	Macaca_nemestrina
ENSCCAG00000025114	-	100	89.486	ENSMLEG00000039954	RBM23	100	89.019	Mandrillus_leucophaeus
ENSCCAG00000025114	-	100	87.696	ENSMICG00000006364	RBM23	100	95.911	Microcebus_murinus
ENSCCAG00000025114	-	100	83.700	ENSMODG00000024448	RBM23	100	87.004	Monodelphis_domestica
ENSCCAG00000025114	-	100	88.315	ENSMPUG00000007151	RBM23	100	88.315	Mustela_putorius_furo
ENSCCAG00000025114	-	100	83.144	ENSMLUG00000012923	RBM23	100	82.005	Myotis_lucifugus
ENSCCAG00000025114	-	100	94.853	ENSNLEG00000014792	RBM23	100	93.665	Nomascus_leucogenys
ENSCCAG00000025114	-	58	97.143	ENSMEUG00000014548	-	60	97.080	Notamacropus_eugenii
ENSCCAG00000025114	-	75	86.916	ENSOPRG00000001092	RBM23	100	86.486	Ochotona_princeps
ENSCCAG00000025114	-	71	47.115	ENSOANG00000008908	-	100	50.836	Ornithorhynchus_anatinus
ENSCCAG00000025114	-	74	91.167	ENSOCUG00000002006	RBM23	100	88.117	Oryctolagus_cuniculus
ENSCCAG00000025114	-	99	79.121	ENSOGAG00000014794	RBM23	100	80.444	Otolemur_garnettii
ENSCCAG00000025114	-	100	86.393	ENSOARG00000019398	RBM23	100	79.698	Ovis_aries
ENSCCAG00000025114	-	100	94.836	ENSPPAG00000037922	RBM23	100	92.488	Pan_paniscus
ENSCCAG00000025114	-	100	88.564	ENSPPRG00000023344	RBM23	100	88.539	Panthera_pardus
ENSCCAG00000025114	-	74	95.899	ENSPTIG00000007831	RBM23	100	87.150	Panthera_tigris_altaica
ENSCCAG00000025114	-	100	93.213	ENSPTRG00000006151	RBM23	100	91.855	Pan_troglodytes
ENSCCAG00000025114	-	95	92.365	ENSPANG00000001324	RBM23	100	96.691	Papio_anubis
ENSCCAG00000025114	-	74	92.405	ENSPCIG00000027773	RBM23	100	85.590	Phascolarctos_cinereus
ENSCCAG00000025114	-	100	93.617	ENSPPYG00000005649	RBM23	100	94.090	Pongo_abelii
ENSCCAG00000025114	-	100	68.384	ENSPCAG00000006669	RBM23	100	68.618	Procavia_capensis
ENSCCAG00000025114	-	100	88.814	ENSPCOG00000018564	RBM23	100	97.770	Propithecus_coquereli
ENSCCAG00000025114	-	100	87.865	ENSPVAG00000013785	RBM23	100	86.067	Pteropus_vampyrus
ENSCCAG00000025114	-	100	92.986	ENSRBIG00000039276	RBM23	100	92.534	Rhinopithecus_bieti
ENSCCAG00000025114	-	100	92.986	ENSRROG00000044026	RBM23	100	92.534	Rhinopithecus_roxellana
ENSCCAG00000025114	-	100	98.071	ENSSBOG00000023037	-	100	98.071	Saimiri_boliviensis_boliviensis
ENSCCAG00000025114	-	97	71.831	ENSSBOG00000034977	-	99	65.789	Saimiri_boliviensis_boliviensis
ENSCCAG00000025114	-	74	92.405	ENSSHAG00000012932	RBM23	100	82.751	Sarcophilus_harrisii
ENSCCAG00000025114	-	100	86.547	ENSSARG00000005165	RBM23	100	86.996	Sorex_araneus
ENSCCAG00000025114	-	100	70.507	ENSSPUG00000000489	RBM23	96	71.034	Sphenodon_punctatus
ENSCCAG00000025114	-	100	87.963	ENSSSCG00000026700	RBM23	100	90.741	Sus_scrofa
ENSCCAG00000025114	-	100	84.106	ENSTBEG00000011543	RBM23	100	83.223	Tupaia_belangeri
ENSCCAG00000025114	-	100	82.998	ENSTTRG00000001500	RBM23	100	84.270	Tursiops_truncatus
ENSCCAG00000025114	-	100	86.547	ENSUAMG00000008524	RBM23	100	89.238	Ursus_americanus
ENSCCAG00000025114	-	100	86.547	ENSUMAG00000014075	RBM23	100	89.238	Ursus_maritimus
ENSCCAG00000025114	-	100	89.213	ENSVVUG00000019815	RBM23	100	89.663	Vulpes_vulpes
ENSCCAG00000025114	-	100	65.632	ENSXETG00000022623	rbm23	100	65.410	Xenopus_tropicalis