EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000025561 (Gene tree)
Gene ID: 108284109
Gene Symbol: GFM1
Alias: EFGM|EGF1|GFM|mtEF-G1
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 44159 bases
Position: chrKV389696.1:1352301-1396459
Accession: 108284109
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000015561	GTP_EFTU	PF00009.27	1.4e-63	1	1
ENSCCAP00000015570	GTP_EFTU	PF00009.27	2.1e-63	1	1
ENSCCAP00000015561	GTP_EFTU_D2	PF03144.25	4.8e-17	1	1
ENSCCAP00000015570	GTP_EFTU_D2	PF03144.25	5.1e-17	1	1
ENSCCAP00000015561	EFG_IV	PF03764.18	5.1e-34	1	1
ENSCCAP00000015570	EFG_IV	PF03764.18	5.3e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000033016	GFM1-202	2313	-	ENSCCAP00000015570	770 (aa)	-	A0A2K5QI99
ENSCCAT00000033007	GFM1-201	3573	XM_017500771	ENSCCAP00000015561	751 (aa)	XP_017356260	A0A2K5QI44

Gene Model

Click here to download ENSCCAG00000025561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000025561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000025561	GFM1	84	45.515	ENSCCAG00000029580	GFM2	94	32.794
ENSCCAG00000025561	GFM1	73	38.255	ENSCCAG00000034379	EEF2	84	40.152
ENSCCAG00000025561	GFM1	60	30.986	ENSCCAG00000035302	EFTUD2	51	30.986
ENSCCAG00000025561	GFM1	61	31.076	ENSCCAG00000025409	GUF1	67	33.971

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000025561	GFM1	98	94.687	ENSG00000168827	GFM1	100	98.333	Homo_sapiens
ENSCCAG00000025561	GFM1	93	76.454	ENSAPOG00000016489	gfm1	99	76.454	Acanthochromis_polyacanthus
ENSCCAG00000025561	GFM1	97	92.308	ENSAMEG00000013542	GFM1	100	91.102	Ailuropoda_melanoleuca
ENSCCAG00000025561	GFM1	97	75.895	ENSACIG00000014465	gfm1	94	75.895	Amphilophus_citrinellus
ENSCCAG00000025561	GFM1	99	77.733	ENSAOCG00000006023	gfm1	99	77.733	Amphiprion_ocellaris
ENSCCAG00000025561	GFM1	99	77.733	ENSAPEG00000024499	gfm1	99	79.498	Amphiprion_percula
ENSCCAG00000025561	GFM1	100	78.029	ENSATEG00000013789	gfm1	100	78.029	Anabas_testudineus
ENSCCAG00000025561	GFM1	97	82.920	ENSAPLG00000005022	GFM1	100	82.920	Anas_platyrhynchos
ENSCCAG00000025561	GFM1	97	81.622	ENSACAG00000006829	GFM1	100	81.622	Anolis_carolinensis
ENSCCAG00000025561	GFM1	100	97.870	ENSANAG00000035983	GFM1	100	97.870	Aotus_nancymaae
ENSCCAG00000025561	GFM1	100	79.338	ENSACLG00000016586	gfm1	99	80.357	Astatotilapia_calliptera
ENSCCAG00000025561	GFM1	100	78.486	ENSAMXG00000013435	gfm1	96	80.694	Astyanax_mexicanus
ENSCCAG00000025561	GFM1	100	91.910	ENSBTAG00000027795	GFM1	100	91.910	Bos_taurus
ENSCCAG00000025561	GFM1	97	55.061	WBGene00009246	gfm-1	99	54.920	Caenorhabditis_elegans
ENSCCAG00000025561	GFM1	100	97.736	ENSCJAG00000000363	GFM1	100	97.736	Callithrix_jacchus
ENSCCAG00000025561	GFM1	99	91.622	ENSCAFG00000009006	GFM1	100	92.604	Canis_familiaris
ENSCCAG00000025561	GFM1	98	92.098	ENSCAFG00020005878	GFM1	99	92.669	Canis_lupus_dingo
ENSCCAG00000025561	GFM1	100	92.175	ENSCHIG00000015220	GFM1	100	92.175	Capra_hircus
ENSCCAG00000025561	GFM1	100	92.308	ENSTSYG00000002013	GFM1	100	92.308	Carlito_syrichta
ENSCCAG00000025561	GFM1	97	80.907	ENSCAPG00000005699	GFM1	98	80.880	Cavia_aperea
ENSCCAG00000025561	GFM1	100	91.247	ENSCPOG00000001194	GFM1	100	91.247	Cavia_porcellus
ENSCCAG00000025561	GFM1	100	93.742	ENSCATG00000037622	GFM1	100	93.742	Cercocebus_atys
ENSCCAG00000025561	GFM1	97	91.245	ENSCLAG00000002503	GFM1	100	89.669	Chinchilla_lanigera
ENSCCAG00000025561	GFM1	100	93.742	ENSCSAG00000012162	GFM1	100	93.742	Chlorocebus_sabaeus
ENSCCAG00000025561	GFM1	100	83.024	ENSCHOG00000004867	GFM1	100	83.024	Choloepus_hoffmanni
ENSCCAG00000025561	GFM1	98	81.855	ENSCPBG00000018367	GFM1	98	81.855	Chrysemys_picta_bellii
ENSCCAG00000025561	GFM1	95	59.116	ENSCING00000011960	-	94	59.116	Ciona_intestinalis
ENSCCAG00000025561	GFM1	95	59.778	ENSCSAVG00000008514	-	99	59.778	Ciona_savignyi
ENSCCAG00000025561	GFM1	98	94.414	ENSCANG00000031714	GFM1	100	94.141	Colobus_angolensis_palliatus
ENSCCAG00000025561	GFM1	100	91.247	ENSCGRG00001022095	GFM1	100	91.247	Cricetulus_griseus_chok1gshd
ENSCCAG00000025561	GFM1	100	91.247	ENSCGRG00000012043	GFM1	100	91.247	Cricetulus_griseus_crigri
ENSCCAG00000025561	GFM1	96	75.661	ENSCSEG00000017088	gfm1	98	75.661	Cynoglossus_semilaevis
ENSCCAG00000025561	GFM1	96	82.802	ENSCVAG00000004126	gfm1	99	81.549	Cyprinodon_variegatus
ENSCCAG00000025561	GFM1	100	77.896	ENSDARG00000063624	gfm1	100	77.896	Danio_rerio
ENSCCAG00000025561	GFM1	54	90.465	ENSDNOG00000016385	-	100	90.465	Dasypus_novemcinctus
ENSCCAG00000025561	GFM1	100	88.462	ENSDORG00000014165	Gfm1	100	88.462	Dipodomys_ordii
ENSCCAG00000025561	GFM1	95	66.901	FBgn0263133	mEFG1	95	66.901	Drosophila_melanogaster
ENSCCAG00000025561	GFM1	98	82.768	ENSETEG00000019197	GFM1	100	82.011	Echinops_telfairi
ENSCCAG00000025561	GFM1	90	66.963	ENSEBUG00000012794	gfm1	99	66.963	Eptatretus_burgeri
ENSCCAG00000025561	GFM1	96	68.138	ENSEEUG00000000429	GFM1	99	68.138	Erinaceus_europaeus
ENSCCAG00000025561	GFM1	100	76.298	ENSELUG00000014728	gfm1	100	76.298	Esox_lucius
ENSCCAG00000025561	GFM1	98	92.653	ENSFCAG00000013291	GFM1	100	91.910	Felis_catus
ENSCCAG00000025561	GFM1	90	82.544	ENSFALG00000007619	GFM1	100	82.544	Ficedula_albicollis
ENSCCAG00000025561	GFM1	100	90.186	ENSFDAG00000016559	GFM1	100	90.186	Fukomys_damarensis
ENSCCAG00000025561	GFM1	97	81.129	ENSFHEG00000006091	gfm1	97	81.129	Fundulus_heteroclitus
ENSCCAG00000025561	GFM1	96	78.423	ENSGMOG00000010161	gfm1	99	78.423	Gadus_morhua
ENSCCAG00000025561	GFM1	97	82.192	ENSGALG00000009634	GFM1	99	82.192	Gallus_gallus
ENSCCAG00000025561	GFM1	100	79.494	ENSGAFG00000012527	gfm1	100	79.494	Gambusia_affinis
ENSCCAG00000025561	GFM1	99	77.321	ENSGACG00000009864	gfm1	99	77.321	Gasterosteus_aculeatus
ENSCCAG00000025561	GFM1	98	94.959	ENSGGOG00000003085	GFM1	100	94.674	Gorilla_gorilla
ENSCCAG00000025561	GFM1	100	79.470	ENSHBUG00000002120	gfm1	100	79.470	Haplochromis_burtoni
ENSCCAG00000025561	GFM1	100	90.716	ENSHGLG00000016855	GFM1	100	90.716	Heterocephalus_glaber_female
ENSCCAG00000025561	GFM1	100	90.716	ENSHGLG00100013049	GFM1	100	90.716	Heterocephalus_glaber_male
ENSCCAG00000025561	GFM1	97	80.138	ENSHCOG00000007638	gfm1	98	79.533	Hippocampus_comes
ENSCCAG00000025561	GFM1	100	77.630	ENSIPUG00000005873	gfm1	100	77.896	Ictalurus_punctatus
ENSCCAG00000025561	GFM1	98	91.269	ENSSTOG00000010150	GFM1	99	91.269	Ictidomys_tridecemlineatus
ENSCCAG00000025561	GFM1	100	90.053	ENSJJAG00000016447	Gfm1	100	90.053	Jaculus_jaculus
ENSCCAG00000025561	GFM1	100	76.698	ENSKMAG00000020768	gfm1	100	76.698	Kryptolebias_marmoratus
ENSCCAG00000025561	GFM1	93	79.772	ENSLBEG00000021315	gfm1	100	79.772	Labrus_bergylta
ENSCCAG00000025561	GFM1	100	79.095	ENSLACG00000012295	GFM1	100	79.095	Latimeria_chalumnae
ENSCCAG00000025561	GFM1	97	75.034	ENSLOCG00000003778	gfm1	99	75.034	Lepisosteus_oculatus
ENSCCAG00000025561	GFM1	99	88.181	ENSLAFG00000010945	GFM1	100	88.828	Loxodonta_africana
ENSCCAG00000025561	GFM1	100	94.008	ENSMFAG00000035731	GFM1	100	94.008	Macaca_fascicularis
ENSCCAG00000025561	GFM1	100	94.141	ENSMMUG00000004961	GFM1	100	94.141	Macaca_mulatta
ENSCCAG00000025561	GFM1	100	93.875	ENSMNEG00000033245	GFM1	100	93.875	Macaca_nemestrina
ENSCCAG00000025561	GFM1	96	94.347	ENSMLEG00000030908	GFM1	100	94.347	Mandrillus_leucophaeus
ENSCCAG00000025561	GFM1	100	78.828	ENSMAMG00000011760	gfm1	100	78.828	Mastacembelus_armatus
ENSCCAG00000025561	GFM1	100	79.470	ENSMZEG00005016639	gfm1	100	79.470	Maylandia_zebra
ENSCCAG00000025561	GFM1	97	82.207	ENSMGAG00000010641	GFM1	97	82.207	Meleagris_gallopavo
ENSCCAG00000025561	GFM1	100	91.910	ENSMAUG00000000611	Gfm1	100	91.910	Mesocricetus_auratus
ENSCCAG00000025561	GFM1	98	93.469	ENSMICG00000049086	GFM1	100	92.440	Microcebus_murinus
ENSCCAG00000025561	GFM1	100	91.379	ENSMOCG00000000465	Gfm1	100	91.379	Microtus_ochrogaster
ENSCCAG00000025561	GFM1	97	79.178	ENSMMOG00000012538	gfm1	98	79.178	Mola_mola
ENSCCAG00000025561	GFM1	98	85.637	ENSMODG00000015673	GFM1	99	85.637	Monodelphis_domestica
ENSCCAG00000025561	GFM1	99	78.869	ENSMALG00000012508	gfm1	99	78.869	Monopterus_albus
ENSCCAG00000025561	GFM1	100	90.981	MGP_CAROLIEiJ_G0025052	Gfm1	100	90.981	Mus_caroli
ENSCCAG00000025561	GFM1	100	91.114	ENSMUSG00000027774	Gfm1	100	91.114	Mus_musculus
ENSCCAG00000025561	GFM1	100	90.849	MGP_PahariEiJ_G0026495	Gfm1	100	90.849	Mus_pahari
ENSCCAG00000025561	GFM1	100	91.114	MGP_SPRETEiJ_G0025994	Gfm1	100	91.114	Mus_spretus
ENSCCAG00000025561	GFM1	100	91.247	ENSMPUG00000002859	GFM1	100	91.247	Mustela_putorius_furo
ENSCCAG00000025561	GFM1	100	92.573	ENSMLUG00000000452	GFM1	100	92.573	Myotis_lucifugus
ENSCCAG00000025561	GFM1	100	90.305	ENSNGAG00000012375	Gfm1	100	90.305	Nannospalax_galili
ENSCCAG00000025561	GFM1	97	81.379	ENSNBRG00000004631	gfm1	99	81.379	Neolamprologus_brichardi
ENSCCAG00000025561	GFM1	97	95.486	ENSNLEG00000004176	GFM1	100	94.807	Nomascus_leucogenys
ENSCCAG00000025561	GFM1	91	77.664	ENSMEUG00000007784	GFM1	100	77.664	Notamacropus_eugenii
ENSCCAG00000025561	GFM1	100	89.481	ENSOPRG00000009860	GFM1	100	89.481	Ochotona_princeps
ENSCCAG00000025561	GFM1	98	92.381	ENSODEG00000004316	GFM1	100	91.379	Octodon_degus
ENSCCAG00000025561	GFM1	100	79.603	ENSONIG00000003772	gfm1	100	79.603	Oreochromis_niloticus
ENSCCAG00000025561	GFM1	98	93.605	ENSOCUG00000013561	GFM1	100	92.838	Oryctolagus_cuniculus
ENSCCAG00000025561	GFM1	94	81.382	ENSORLG00000006487	gfm1	100	81.382	Oryzias_latipes
ENSCCAG00000025561	GFM1	97	80.716	ENSORLG00020003362	gfm1	97	80.716	Oryzias_latipes_hni
ENSCCAG00000025561	GFM1	97	80.303	ENSORLG00015005829	gfm1	97	80.303	Oryzias_latipes_hsok
ENSCCAG00000025561	GFM1	97	81.543	ENSOMEG00000012894	gfm1	97	81.543	Oryzias_melastigma
ENSCCAG00000025561	GFM1	100	91.247	ENSOGAG00000008298	GFM1	100	91.247	Otolemur_garnettii
ENSCCAG00000025561	GFM1	97	92.445	ENSOARG00000002409	GFM1	100	92.445	Ovis_aries
ENSCCAG00000025561	GFM1	98	94.959	ENSPPAG00000033881	GFM1	100	94.674	Pan_paniscus
ENSCCAG00000025561	GFM1	98	92.517	ENSPPRG00000009281	GFM1	100	91.777	Panthera_pardus
ENSCCAG00000025561	GFM1	98	92.381	ENSPTIG00000012416	GFM1	100	91.645	Panthera_tigris_altaica
ENSCCAG00000025561	GFM1	98	94.959	ENSPTRG00000015570	GFM1	100	94.674	Pan_troglodytes
ENSCCAG00000025561	GFM1	100	94.008	ENSPANG00000016512	GFM1	100	94.008	Papio_anubis
ENSCCAG00000025561	GFM1	97	80.716	ENSPKIG00000004876	gfm1	97	80.716	Paramormyrops_kingsleyae
ENSCCAG00000025561	GFM1	98	83.629	ENSPSIG00000012567	GFM1	98	83.629	Pelodiscus_sinensis
ENSCCAG00000025561	GFM1	96	79.473	ENSPMGG00000014068	gfm1	99	79.473	Periophthalmus_magnuspinnatus
ENSCCAG00000025561	GFM1	100	91.379	ENSPEMG00000008942	Gfm1	100	91.379	Peromyscus_maniculatus_bairdii
ENSCCAG00000025561	GFM1	86	84.056	ENSPCIG00000020195	GFM1	99	84.056	Phascolarctos_cinereus
ENSCCAG00000025561	GFM1	97	81.818	ENSPFOG00000011022	gfm1	97	81.818	Poecilia_formosa
ENSCCAG00000025561	GFM1	97	81.655	ENSPLAG00000019585	gfm1	97	80.725	Poecilia_latipinna
ENSCCAG00000025561	GFM1	97	81.680	ENSPMEG00000012376	gfm1	97	81.680	Poecilia_mexicana
ENSCCAG00000025561	GFM1	97	81.267	ENSPREG00000001332	gfm1	92	81.267	Poecilia_reticulata
ENSCCAG00000025561	GFM1	98	94.959	ENSPPYG00000014244	GFM1	100	94.674	Pongo_abelii
ENSCCAG00000025561	GFM1	94	87.340	ENSPCAG00000008934	GFM1	100	87.340	Procavia_capensis
ENSCCAG00000025561	GFM1	98	93.878	ENSPCOG00000022259	GFM1	100	92.971	Propithecus_coquereli
ENSCCAG00000025561	GFM1	100	92.042	ENSPVAG00000013605	GFM1	100	92.042	Pteropus_vampyrus
ENSCCAG00000025561	GFM1	100	79.470	ENSPNYG00000006037	gfm1	100	80.379	Pundamilia_nyererei
ENSCCAG00000025561	GFM1	100	78.695	ENSPNAG00000001237	gfm1	100	78.695	Pygocentrus_nattereri
ENSCCAG00000025561	GFM1	100	90.981	ENSRNOG00000012873	Gfm1	100	90.981	Rattus_norvegicus
ENSCCAG00000025561	GFM1	98	94.142	ENSRBIG00000031363	GFM1	100	93.875	Rhinopithecus_bieti
ENSCCAG00000025561	GFM1	98	94.278	ENSRROG00000031081	GFM1	100	94.008	Rhinopithecus_roxellana
ENSCCAG00000025561	GFM1	92	56.178	YLR069C	-	90	56.178	Saccharomyces_cerevisiae
ENSCCAG00000025561	GFM1	100	98.935	ENSSBOG00000023252	GFM1	100	98.935	Saimiri_boliviensis_boliviensis
ENSCCAG00000025561	GFM1	99	86.497	ENSSHAG00000017772	GFM1	99	86.497	Sarcophilus_harrisii
ENSCCAG00000025561	GFM1	100	78.590	ENSSFOG00015003117	gfm1	99	80.357	Scleropages_formosus
ENSCCAG00000025561	GFM1	100	76.689	ENSSMAG00000013221	gfm1	100	76.689	Scophthalmus_maximus
ENSCCAG00000025561	GFM1	97	79.890	ENSSDUG00000018665	gfm1	97	79.890	Seriola_dumerili
ENSCCAG00000025561	GFM1	97	79.890	ENSSLDG00000020606	gfm1	97	79.890	Seriola_lalandi_dorsalis
ENSCCAG00000025561	GFM1	97	80.220	ENSSPUG00000018686	GFM1	98	80.220	Sphenodon_punctatus
ENSCCAG00000025561	GFM1	100	78.013	ENSSPAG00000008800	gfm1	100	78.013	Stegastes_partitus
ENSCCAG00000025561	GFM1	100	91.126	ENSSSCG00000025651	GFM1	100	91.126	Sus_scrofa
ENSCCAG00000025561	GFM1	99	77.674	ENSTRUG00000009244	gfm1	99	77.674	Takifugu_rubripes
ENSCCAG00000025561	GFM1	100	78.411	ENSTNIG00000007729	gfm1	100	78.411	Tetraodon_nigroviridis
ENSCCAG00000025561	GFM1	81	94.737	ENSTBEG00000017404	GFM1	93	86.624	Tupaia_belangeri
ENSCCAG00000025561	GFM1	100	90.501	ENSTTRG00000001735	GFM1	100	90.501	Tursiops_truncatus
ENSCCAG00000025561	GFM1	98	92.109	ENSUAMG00000026381	GFM1	100	91.512	Ursus_americanus
ENSCCAG00000025561	GFM1	98	91.973	ENSUMAG00000011268	GFM1	100	91.379	Ursus_maritimus
ENSCCAG00000025561	GFM1	100	88.064	ENSVPAG00000009444	GFM1	100	88.064	Vicugna_pacos
ENSCCAG00000025561	GFM1	99	90.228	ENSVVUG00000020091	GFM1	100	92.160	Vulpes_vulpes
ENSCCAG00000025561	GFM1	100	80.927	ENSXETG00000032551	GFM1	100	80.927	Xenopus_tropicalis
ENSCCAG00000025561	GFM1	52	78.061	ENSXCOG00000012590	gfm1	90	78.061	Xiphophorus_couchianus
ENSCCAG00000025561	GFM1	97	81.129	ENSXMAG00000000261	gfm1	97	81.129	Xiphophorus_maculatus