EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000025589 (Gene tree)
Gene ID: 108315476
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 219872 bases
Position: chrKV389598.1:286609-506480
Accession: 108315476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000015636	S1	PF00575.23	9.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000033081	SRBD1-201	2985	XM_017544825	ENSCCAP00000015636	994 (aa)	XP_017400314	A0A2K5QIB2

Gene Model

Click here to download ENSCCAG00000025589's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000025589's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000025589	SRBD1	100	94.070	ENSG00000068784	SRBD1	100	94.070	Homo_sapiens
ENSCCAG00000025589	SRBD1	100	51.566	ENSAPOG00000005103	si:ch211-117n7.8	95	53.189	Acanthochromis_polyacanthus
ENSCCAG00000025589	SRBD1	100	91.357	ENSAMEG00000005993	SRBD1	100	91.357	Ailuropoda_melanoleuca
ENSCCAG00000025589	SRBD1	83	57.669	ENSACIG00000009875	si:ch211-117n7.8	97	52.935	Amphilophus_citrinellus
ENSCCAG00000025589	SRBD1	98	51.460	ENSAOCG00000024718	si:ch211-117n7.8	97	52.085	Amphiprion_ocellaris
ENSCCAG00000025589	SRBD1	97	52.081	ENSAPEG00000002645	si:ch211-117n7.8	99	52.138	Amphiprion_percula
ENSCCAG00000025589	SRBD1	98	52.056	ENSATEG00000010844	si:ch211-117n7.8	97	52.284	Anabas_testudineus
ENSCCAG00000025589	SRBD1	100	71.200	ENSAPLG00000006313	SRBD1	100	71.300	Anas_platyrhynchos
ENSCCAG00000025589	SRBD1	100	98.290	ENSANAG00000025573	SRBD1	100	98.290	Aotus_nancymaae
ENSCCAG00000025589	SRBD1	99	50.583	ENSACLG00000024219	si:ch211-117n7.8	94	52.205	Astatotilapia_calliptera
ENSCCAG00000025589	SRBD1	85	60.375	ENSAMXG00000004294	SRBD1	93	56.211	Astyanax_mexicanus
ENSCCAG00000025589	SRBD1	100	87.851	ENSBTAG00000007508	SRBD1	97	88.554	Bos_taurus
ENSCCAG00000025589	SRBD1	100	97.183	ENSCJAG00000000727	SRBD1	100	97.183	Callithrix_jacchus
ENSCCAG00000025589	SRBD1	100	90.471	ENSCAFG00000002554	SRBD1	100	90.471	Canis_familiaris
ENSCCAG00000025589	SRBD1	100	87.450	ENSCAFG00020026284	SRBD1	99	90.476	Canis_lupus_dingo
ENSCCAG00000025589	SRBD1	100	88.153	ENSCHIG00000016535	SRBD1	98	88.855	Capra_hircus
ENSCCAG00000025589	SRBD1	100	90.982	ENSTSYG00000012797	SRBD1	100	90.982	Carlito_syrichta
ENSCCAG00000025589	SRBD1	100	87.651	ENSCPOG00000004773	SRBD1	100	87.651	Cavia_porcellus
ENSCCAG00000025589	SRBD1	100	94.970	ENSCATG00000039530	SRBD1	100	94.970	Cercocebus_atys
ENSCCAG00000025589	SRBD1	100	88.778	ENSCLAG00000008623	SRBD1	100	88.778	Chinchilla_lanigera
ENSCCAG00000025589	SRBD1	100	95.171	ENSCSAG00000013350	SRBD1	100	95.171	Chlorocebus_sabaeus
ENSCCAG00000025589	SRBD1	93	77.252	ENSCHOG00000003805	SRBD1	93	77.252	Choloepus_hoffmanni
ENSCCAG00000025589	SRBD1	100	73.054	ENSCPBG00000005677	SRBD1	100	72.827	Chrysemys_picta_bellii
ENSCCAG00000025589	SRBD1	79	42.911	ENSCING00000005950	-	99	42.911	Ciona_intestinalis
ENSCCAG00000025589	SRBD1	79	43.325	ENSCSAVG00000000861	-	99	43.325	Ciona_savignyi
ENSCCAG00000025589	SRBD1	99	94.556	ENSCANG00000016307	SRBD1	99	94.556	Colobus_angolensis_palliatus
ENSCCAG00000025589	SRBD1	100	84.469	ENSCGRG00001000513	Srbd1	100	84.469	Cricetulus_griseus_chok1gshd
ENSCCAG00000025589	SRBD1	100	84.469	ENSCGRG00000002283	Srbd1	100	84.469	Cricetulus_griseus_crigri
ENSCCAG00000025589	SRBD1	100	50.980	ENSCSEG00000000856	si:ch211-117n7.8	87	55.418	Cynoglossus_semilaevis
ENSCCAG00000025589	SRBD1	84	57.547	ENSCVAG00000020212	si:ch211-117n7.8	98	54.952	Cyprinodon_variegatus
ENSCCAG00000025589	SRBD1	100	90.090	ENSDNOG00000018686	SRBD1	100	90.090	Dasypus_novemcinctus
ENSCCAG00000025589	SRBD1	100	86.332	ENSDORG00000010468	Srbd1	100	86.332	Dipodomys_ordii
ENSCCAG00000025589	SRBD1	94	34.413	FBgn0051156	CG31156	98	34.615	Drosophila_melanogaster
ENSCCAG00000025589	SRBD1	89	83.036	ENSETEG00000000739	SRBD1	91	83.036	Echinops_telfairi
ENSCCAG00000025589	SRBD1	73	49.116	ENSEBUG00000008902	si:ch211-117n7.8	96	49.116	Eptatretus_burgeri
ENSCCAG00000025589	SRBD1	100	88.353	ENSEASG00005003132	SRBD1	97	93.631	Equus_asinus_asinus
ENSCCAG00000025589	SRBD1	100	91.365	ENSECAG00000013865	SRBD1	98	91.365	Equus_caballus
ENSCCAG00000025589	SRBD1	85	59.766	ENSELUG00000012592	si:ch211-117n7.8	82	59.766	Esox_lucius
ENSCCAG00000025589	SRBD1	100	91.265	ENSFCAG00000005101	SRBD1	100	91.265	Felis_catus
ENSCCAG00000025589	SRBD1	100	68.712	ENSFALG00000012966	SRBD1	100	67.761	Ficedula_albicollis
ENSCCAG00000025589	SRBD1	99	86.382	ENSFDAG00000016670	SRBD1	98	87.422	Fukomys_damarensis
ENSCCAG00000025589	SRBD1	95	53.333	ENSFHEG00000019480	si:ch211-117n7.8	92	53.333	Fundulus_heteroclitus
ENSCCAG00000025589	SRBD1	50	52.477	ENSGMOG00000018010	-	100	52.477	Gadus_morhua
ENSCCAG00000025589	SRBD1	100	70.512	ENSGALG00000009990	SRBD1	100	70.040	Gallus_gallus
ENSCCAG00000025589	SRBD1	98	51.000	ENSGAFG00000019664	si:ch211-117n7.8	97	51.264	Gambusia_affinis
ENSCCAG00000025589	SRBD1	62	60.640	ENSGACG00000010794	si:ch211-117n7.8	100	60.800	Gasterosteus_aculeatus
ENSCCAG00000025589	SRBD1	84	80.866	ENSGAGG00000006166	SRBD1	99	80.866	Gopherus_agassizii
ENSCCAG00000025589	SRBD1	97	94.324	ENSGGOG00000005910	SRBD1	99	94.283	Gorilla_gorilla
ENSCCAG00000025589	SRBD1	90	47.709	ENSHBUG00000013207	si:ch211-117n7.8	96	46.429	Haplochromis_burtoni
ENSCCAG00000025589	SRBD1	99	88.520	ENSHGLG00000018153	-	99	88.520	Heterocephalus_glaber_female
ENSCCAG00000025589	SRBD1	99	88.318	ENSHGLG00100015183	-	99	88.318	Heterocephalus_glaber_male
ENSCCAG00000025589	SRBD1	85	60.798	ENSIPUG00000009661	srbd1	97	55.873	Ictalurus_punctatus
ENSCCAG00000025589	SRBD1	100	91.055	ENSSTOG00000005898	SRBD1	100	91.055	Ictidomys_tridecemlineatus
ENSCCAG00000025589	SRBD1	100	81.143	ENSJJAG00000022244	Srbd1	100	81.143	Jaculus_jaculus
ENSCCAG00000025589	SRBD1	98	50.693	ENSKMAG00000003473	si:ch211-117n7.8	94	52.058	Kryptolebias_marmoratus
ENSCCAG00000025589	SRBD1	84	56.858	ENSLBEG00000027518	si:ch211-117n7.8	83	56.858	Labrus_bergylta
ENSCCAG00000025589	SRBD1	85	70.567	ENSLACG00000009790	SRBD1	100	70.567	Latimeria_chalumnae
ENSCCAG00000025589	SRBD1	100	57.424	ENSLOCG00000016360	si:ch211-117n7.8	99	57.424	Lepisosteus_oculatus
ENSCCAG00000025589	SRBD1	100	95.272	ENSMFAG00000042026	SRBD1	100	95.272	Macaca_fascicularis
ENSCCAG00000025589	SRBD1	100	94.970	ENSMMUG00000003490	SRBD1	100	94.970	Macaca_mulatta
ENSCCAG00000025589	SRBD1	100	92.555	ENSMNEG00000034701	SRBD1	100	92.555	Macaca_nemestrina
ENSCCAG00000025589	SRBD1	100	95.070	ENSMLEG00000000745	SRBD1	100	95.070	Mandrillus_leucophaeus
ENSCCAG00000025589	SRBD1	82	56.490	ENSMAMG00000021921	si:ch211-117n7.8	85	56.257	Mastacembelus_armatus
ENSCCAG00000025589	SRBD1	99	50.583	ENSMZEG00005027369	si:ch211-117n7.8	94	52.205	Maylandia_zebra
ENSCCAG00000025589	SRBD1	80	75.313	ENSMGAG00000010273	SRBD1	100	75.313	Meleagris_gallopavo
ENSCCAG00000025589	SRBD1	79	86.347	ENSMAUG00000013916	Srbd1	99	83.886	Mesocricetus_auratus
ENSCCAG00000025589	SRBD1	100	92.570	ENSMICG00000007835	SRBD1	100	92.570	Microcebus_murinus
ENSCCAG00000025589	SRBD1	100	83.751	ENSMOCG00000018716	Srbd1	100	83.751	Microtus_ochrogaster
ENSCCAG00000025589	SRBD1	88	54.525	ENSMMOG00000007507	si:ch211-117n7.8	92	54.525	Mola_mola
ENSCCAG00000025589	SRBD1	99	50.967	ENSMALG00000001562	si:ch211-117n7.8	93	52.977	Monopterus_albus
ENSCCAG00000025589	SRBD1	100	82.211	MGP_CAROLIEiJ_G0021934	Srbd1	99	85.623	Mus_caroli
ENSCCAG00000025589	SRBD1	100	82.312	ENSMUSG00000024135	Srbd1	99	84.694	Mus_musculus
ENSCCAG00000025589	SRBD1	100	81.508	MGP_PahariEiJ_G0020924	Srbd1	100	81.508	Mus_pahari
ENSCCAG00000025589	SRBD1	100	82.412	MGP_SPRETEiJ_G0022850	Srbd1	100	82.412	Mus_spretus
ENSCCAG00000025589	SRBD1	100	88.241	ENSMLUG00000007039	SRBD1	100	88.241	Myotis_lucifugus
ENSCCAG00000025589	SRBD1	100	82.991	ENSNGAG00000011893	Srbd1	100	82.600	Nannospalax_galili
ENSCCAG00000025589	SRBD1	90	53.319	ENSNBRG00000012873	si:ch211-117n7.8	96	51.509	Neolamprologus_brichardi
ENSCCAG00000025589	SRBD1	100	94.372	ENSNLEG00000016877	SRBD1	100	94.372	Nomascus_leucogenys
ENSCCAG00000025589	SRBD1	100	85.126	ENSODEG00000012095	SRBD1	100	85.126	Octodon_degus
ENSCCAG00000025589	SRBD1	99	50.778	ENSONIG00000000945	si:ch211-117n7.8	99	58.053	Oreochromis_niloticus
ENSCCAG00000025589	SRBD1	100	91.265	ENSOCUG00000015385	SRBD1	100	91.265	Oryctolagus_cuniculus
ENSCCAG00000025589	SRBD1	85	53.157	ENSORLG00000004427	si:ch211-117n7.8	84	53.157	Oryzias_latipes
ENSCCAG00000025589	SRBD1	99	51.255	ENSORLG00020012792	si:ch211-117n7.8	97	51.940	Oryzias_latipes_hni
ENSCCAG00000025589	SRBD1	99	50.578	ENSORLG00015018598	si:ch211-117n7.8	84	55.798	Oryzias_latipes_hsok
ENSCCAG00000025589	SRBD1	86	55.312	ENSOMEG00000012229	si:ch211-117n7.8	83	55.312	Oryzias_melastigma
ENSCCAG00000025589	SRBD1	100	84.739	ENSOGAG00000001076	SRBD1	100	84.739	Otolemur_garnettii
ENSCCAG00000025589	SRBD1	100	83.899	ENSOARG00000005958	SRBD1	100	84.578	Ovis_aries
ENSCCAG00000025589	SRBD1	100	94.271	ENSPPAG00000038442	SRBD1	100	94.271	Pan_paniscus
ENSCCAG00000025589	SRBD1	100	91.256	ENSPPRG00000003449	SRBD1	100	91.256	Panthera_pardus
ENSCCAG00000025589	SRBD1	100	91.357	ENSPTIG00000012495	SRBD1	100	91.357	Panthera_tigris_altaica
ENSCCAG00000025589	SRBD1	100	94.472	ENSPTRG00000011889	SRBD1	100	94.472	Pan_troglodytes
ENSCCAG00000025589	SRBD1	100	94.869	ENSPANG00000008063	SRBD1	100	94.869	Papio_anubis
ENSCCAG00000025589	SRBD1	96	54.489	ENSPKIG00000021973	si:ch211-117n7.8	97	54.309	Paramormyrops_kingsleyae
ENSCCAG00000025589	SRBD1	100	72.362	ENSPSIG00000008992	SRBD1	100	72.764	Pelodiscus_sinensis
ENSCCAG00000025589	SRBD1	89	53.050	ENSPMGG00000013348	si:ch211-117n7.8	98	51.120	Periophthalmus_magnuspinnatus
ENSCCAG00000025589	SRBD1	100	83.023	ENSPEMG00000020684	Srbd1	100	83.023	Peromyscus_maniculatus_bairdii
ENSCCAG00000025589	SRBD1	98	51.043	ENSPFOG00000010650	si:ch211-117n7.8	97	51.362	Poecilia_formosa
ENSCCAG00000025589	SRBD1	98	51.043	ENSPLAG00000002141	si:ch211-117n7.8	97	51.362	Poecilia_latipinna
ENSCCAG00000025589	SRBD1	98	51.142	ENSPMEG00000018537	si:ch211-117n7.8	97	51.463	Poecilia_mexicana
ENSCCAG00000025589	SRBD1	97	51.454	ENSPREG00000003258	si:ch211-117n7.8	87	56.401	Poecilia_reticulata
ENSCCAG00000025589	SRBD1	100	86.635	ENSPPYG00000012444	SRBD1	99	86.635	Pongo_abelii
ENSCCAG00000025589	SRBD1	82	82.493	ENSPCAG00000005629	SRBD1	85	82.493	Procavia_capensis
ENSCCAG00000025589	SRBD1	100	80.280	ENSPCOG00000017669	SRBD1	100	80.280	Propithecus_coquereli
ENSCCAG00000025589	SRBD1	100	81.709	ENSPVAG00000001782	SRBD1	100	81.709	Pteropus_vampyrus
ENSCCAG00000025589	SRBD1	90	51.885	ENSPNYG00000000508	si:ch211-117n7.8	96	50.365	Pundamilia_nyererei
ENSCCAG00000025589	SRBD1	96	56.921	ENSPNAG00000013492	SRBD1	95	57.025	Pygocentrus_nattereri
ENSCCAG00000025589	SRBD1	100	81.024	ENSRNOG00000014720	Srbd1	99	81.727	Rattus_norvegicus
ENSCCAG00000025589	SRBD1	99	94.355	ENSRBIG00000033486	SRBD1	99	94.355	Rhinopithecus_bieti
ENSCCAG00000025589	SRBD1	99	94.355	ENSRROG00000041599	SRBD1	99	94.355	Rhinopithecus_roxellana
ENSCCAG00000025589	SRBD1	100	97.887	ENSSBOG00000024982	SRBD1	100	97.887	Saimiri_boliviensis_boliviensis
ENSCCAG00000025589	SRBD1	94	55.357	ENSSFOG00015001128	si:ch211-117n7.8	99	55.252	Scleropages_formosus
ENSCCAG00000025589	SRBD1	98	51.530	ENSSMAG00000018256	si:ch211-117n7.8	83	57.159	Scophthalmus_maximus
ENSCCAG00000025589	SRBD1	86	56.732	ENSSLDG00000023189	si:ch211-117n7.8	84	56.732	Seriola_lalandi_dorsalis
ENSCCAG00000025589	SRBD1	100	78.291	ENSSARG00000009740	SRBD1	100	78.291	Sorex_araneus
ENSCCAG00000025589	SRBD1	91	73.436	ENSSPUG00000010475	SRBD1	98	75.254	Sphenodon_punctatus
ENSCCAG00000025589	SRBD1	89	52.643	ENSSPAG00000008092	-	95	51.713	Stegastes_partitus
ENSCCAG00000025589	SRBD1	100	89.659	ENSSSCG00000008445	SRBD1	98	90.261	Sus_scrofa
ENSCCAG00000025589	SRBD1	84	77.590	ENSTGUG00000003878	SRBD1	100	77.590	Taeniopygia_guttata
ENSCCAG00000025589	SRBD1	99	50.483	ENSTRUG00000007080	si:ch211-117n7.8	96	55.906	Takifugu_rubripes
ENSCCAG00000025589	SRBD1	99	50.097	ENSTNIG00000007464	si:ch211-117n7.8	97	50.300	Tetraodon_nigroviridis
ENSCCAG00000025589	SRBD1	76	98.936	ENSTBEG00000004556	SRBD1	76	98.936	Tupaia_belangeri
ENSCCAG00000025589	SRBD1	94	92.166	ENSTTRG00000011871	SRBD1	94	92.166	Tursiops_truncatus
ENSCCAG00000025589	SRBD1	100	91.165	ENSUAMG00000008126	SRBD1	97	93.841	Ursus_americanus
ENSCCAG00000025589	SRBD1	100	91.165	ENSUMAG00000012902	SRBD1	98	91.165	Ursus_maritimus
ENSCCAG00000025589	SRBD1	91	91.731	ENSVPAG00000006825	SRBD1	100	91.731	Vicugna_pacos
ENSCCAG00000025589	SRBD1	100	89.960	ENSVVUG00000005389	SRBD1	100	90.562	Vulpes_vulpes
ENSCCAG00000025589	SRBD1	100	52.930	ENSXETG00000002760	srbd1	100	52.930	Xenopus_tropicalis
ENSCCAG00000025589	SRBD1	98	51.043	ENSXMAG00000016861	si:ch211-117n7.8	97	51.362	Xiphophorus_maculatus