EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000025652 (Gene tree)
Gene ID: 108305315
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 57160 bases
Position: chrKV389488.1:2998722-3055881
Accession: 108305315
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000015885	zf-CCCH	PF00642.24	0.00027	1	1
ENSCCAP00000015915	zf-CCCH	PF00642.24	0.00029	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000033363	RC3H1-202	3363	XM_017529911	ENSCCAP00000015915	1120 (aa)	XP_017385400	A0A2K5QJ86
ENSCCAT00000033333	RC3H1-201	3940	-	ENSCCAP00000015885	1064 (aa)	-	A0A2K5QJ60

Gene Model

Click here to download ENSCCAG00000025652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000025652's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000025652	RC3H1	98	54.396	ENSCCAG00000001404	RC3H2	94	83.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000025652	RC3H1	100	96.558	ENSG00000135870	RC3H1	100	96.558	Homo_sapiens
ENSCCAG00000025652	RC3H1	98	96.746	ENSAMEG00000015657	RC3H1	100	94.616	Ailuropoda_melanoleuca
ENSCCAG00000025652	RC3H1	100	86.661	ENSAPLG00000005341	RC3H1	100	86.574	Anas_platyrhynchos
ENSCCAG00000025652	RC3H1	98	86.497	ENSACAG00000015271	RC3H1	100	83.843	Anolis_carolinensis
ENSCCAG00000025652	RC3H1	100	97.440	ENSANAG00000036716	RC3H1	100	97.440	Aotus_nancymaae
ENSCCAG00000025652	RC3H1	100	93.557	ENSBTAG00000052708	RC3H1	100	93.557	Bos_taurus
ENSCCAG00000025652	RC3H1	100	97.352	ENSCJAG00000009106	RC3H1	100	97.352	Callithrix_jacchus
ENSCCAG00000025652	RC3H1	98	97.033	ENSCAFG00000014434	RC3H1	100	94.793	Canis_familiaris
ENSCCAG00000025652	RC3H1	98	97.033	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSCCAG00000025652	RC3H1	99	95.940	ENSCHIG00000002873	RC3H1	100	94.737	Capra_hircus
ENSCCAG00000025652	RC3H1	98	95.793	ENSTSYG00000003913	RC3H1	99	93.645	Carlito_syrichta
ENSCCAG00000025652	RC3H1	100	89.506	ENSCPOG00000004349	RC3H1	100	89.153	Cavia_porcellus
ENSCCAG00000025652	RC3H1	98	98.756	ENSCATG00000033497	RC3H1	100	96.734	Cercocebus_atys
ENSCCAG00000025652	RC3H1	98	94.742	ENSCLAG00000011267	RC3H1	100	92.593	Chinchilla_lanigera
ENSCCAG00000025652	RC3H1	98	98.756	ENSCSAG00000011823	RC3H1	85	96.593	Chlorocebus_sabaeus
ENSCCAG00000025652	RC3H1	93	96.304	ENSCPBG00000014670	RC3H1	100	96.304	Chrysemys_picta_bellii
ENSCCAG00000025652	RC3H1	100	96.737	ENSCANG00000032120	RC3H1	100	96.737	Colobus_angolensis_palliatus
ENSCCAG00000025652	RC3H1	100	92.410	ENSCGRG00001020812	Rc3h1	100	91.968	Cricetulus_griseus_chok1gshd
ENSCCAG00000025652	RC3H1	100	92.410	ENSCGRG00000011952	Rc3h1	100	91.968	Cricetulus_griseus_crigri
ENSCCAG00000025652	RC3H1	58	94.534	ENSDNOG00000011494	RC3H1	99	94.534	Dasypus_novemcinctus
ENSCCAG00000025652	RC3H1	100	93.645	ENSDORG00000004855	Rc3h1	100	93.645	Dipodomys_ordii
ENSCCAG00000025652	RC3H1	81	96.168	ENSETEG00000012064	RC3H1	86	96.168	Echinops_telfairi
ENSCCAG00000025652	RC3H1	100	93.733	ENSEASG00005017000	RC3H1	100	93.645	Equus_asinus_asinus
ENSCCAG00000025652	RC3H1	98	95.598	ENSECAG00000021208	RC3H1	100	93.469	Equus_caballus
ENSCCAG00000025652	RC3H1	91	83.673	ENSEEUG00000014861	RC3H1	93	83.673	Erinaceus_europaeus
ENSCCAG00000025652	RC3H1	100	95.587	ENSFCAG00000014924	RC3H1	100	95.587	Felis_catus
ENSCCAG00000025652	RC3H1	100	85.502	ENSFALG00000002947	RC3H1	100	84.891	Ficedula_albicollis
ENSCCAG00000025652	RC3H1	98	94.837	ENSFDAG00000013303	RC3H1	100	92.681	Fukomys_damarensis
ENSCCAG00000025652	RC3H1	100	85.627	ENSGALG00000004587	RC3H1	100	85.539	Gallus_gallus
ENSCCAG00000025652	RC3H1	100	86.240	ENSGAGG00000018194	RC3H1	100	86.415	Gopherus_agassizii
ENSCCAG00000025652	RC3H1	100	92.185	ENSGGOG00000005735	RC3H1	100	92.185	Gorilla_gorilla
ENSCCAG00000025652	RC3H1	88	88.092	ENSHGLG00000004183	-	99	88.043	Heterocephalus_glaber_female
ENSCCAG00000025652	RC3H1	98	94.264	ENSHGLG00100008577	RC3H1	100	91.887	Heterocephalus_glaber_male
ENSCCAG00000025652	RC3H1	100	93.739	ENSSTOG00000016033	RC3H1	100	93.739	Ictidomys_tridecemlineatus
ENSCCAG00000025652	RC3H1	98	95.033	ENSJJAG00000018915	Rc3h1	100	92.851	Jaculus_jaculus
ENSCCAG00000025652	RC3H1	98	76.554	ENSLACG00000016186	RC3H1	100	77.859	Latimeria_chalumnae
ENSCCAG00000025652	RC3H1	98	97.225	ENSLAFG00000004367	RC3H1	100	95.082	Loxodonta_africana
ENSCCAG00000025652	RC3H1	100	98.120	ENSMFAG00000033725	RC3H1	100	96.646	Macaca_fascicularis
ENSCCAG00000025652	RC3H1	98	98.565	ENSMMUG00000000630	RC3H1	100	96.558	Macaca_mulatta
ENSCCAG00000025652	RC3H1	98	98.756	ENSMNEG00000035968	RC3H1	100	96.734	Macaca_nemestrina
ENSCCAG00000025652	RC3H1	98	98.660	ENSMLEG00000037455	RC3H1	100	96.646	Mandrillus_leucophaeus
ENSCCAG00000025652	RC3H1	93	94.052	ENSMAUG00000020864	Rc3h1	93	93.548	Mesocricetus_auratus
ENSCCAG00000025652	RC3H1	100	95.234	ENSMICG00000003000	RC3H1	100	95.146	Microcebus_murinus
ENSCCAG00000025652	RC3H1	93	91.098	ENSMOCG00000016587	Rc3h1	98	90.625	Microtus_ochrogaster
ENSCCAG00000025652	RC3H1	100	90.300	ENSMODG00000004289	RC3H1	100	90.388	Monodelphis_domestica
ENSCCAG00000025652	RC3H1	100	92.233	MGP_CAROLIEiJ_G0014756	Rc3h1	100	91.703	Mus_caroli
ENSCCAG00000025652	RC3H1	100	92.056	ENSMUSG00000040423	Rc3h1	100	91.527	Mus_musculus
ENSCCAG00000025652	RC3H1	100	91.880	MGP_PahariEiJ_G0027992	Rc3h1	100	91.350	Mus_pahari
ENSCCAG00000025652	RC3H1	100	91.968	MGP_SPRETEiJ_G0015563	Rc3h1	100	91.439	Mus_spretus
ENSCCAG00000025652	RC3H1	100	94.621	ENSMPUG00000004747	RC3H1	100	94.175	Mustela_putorius_furo
ENSCCAG00000025652	RC3H1	100	93.292	ENSMLUG00000011127	RC3H1	100	93.204	Myotis_lucifugus
ENSCCAG00000025652	RC3H1	100	93.645	ENSNGAG00000011135	Rc3h1	100	93.116	Nannospalax_galili
ENSCCAG00000025652	RC3H1	100	96.470	ENSNLEG00000015327	RC3H1	100	96.470	Nomascus_leucogenys
ENSCCAG00000025652	RC3H1	99	81.609	ENSOPRG00000013068	RC3H1	99	81.521	Ochotona_princeps
ENSCCAG00000025652	RC3H1	98	94.359	ENSODEG00000014185	RC3H1	100	92.240	Octodon_degus
ENSCCAG00000025652	RC3H1	98	91.477	ENSOANG00000000924	RC3H1	100	89.345	Ornithorhynchus_anatinus
ENSCCAG00000025652	RC3H1	98	95.885	ENSOCUG00000004930	RC3H1	98	93.733	Oryctolagus_cuniculus
ENSCCAG00000025652	RC3H1	100	88.194	ENSOGAG00000004044	RC3H1	100	88.106	Otolemur_garnettii
ENSCCAG00000025652	RC3H1	98	96.092	ENSOARG00000013011	RC3H1	100	94.035	Ovis_aries
ENSCCAG00000025652	RC3H1	100	96.561	ENSPPAG00000039253	RC3H1	100	96.561	Pan_paniscus
ENSCCAG00000025652	RC3H1	100	94.616	ENSPPRG00000009007	RC3H1	100	94.528	Panthera_pardus
ENSCCAG00000025652	RC3H1	100	94.991	ENSPTIG00000015326	RC3H1	100	94.903	Panthera_tigris_altaica
ENSCCAG00000025652	RC3H1	100	96.561	ENSPTRG00000001702	RC3H1	100	96.561	Pan_troglodytes
ENSCCAG00000025652	RC3H1	98	98.660	ENSPANG00000008886	RC3H1	100	96.646	Papio_anubis
ENSCCAG00000025652	RC3H1	100	87.204	ENSPSIG00000016181	RC3H1	100	87.379	Pelodiscus_sinensis
ENSCCAG00000025652	RC3H1	100	92.056	ENSPEMG00000011966	Rc3h1	100	91.615	Peromyscus_maniculatus_bairdii
ENSCCAG00000025652	RC3H1	77	92.015	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSCCAG00000025652	RC3H1	100	97.180	ENSPPYG00000000490	RC3H1	100	97.180	Pongo_abelii
ENSCCAG00000025652	RC3H1	80	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSCCAG00000025652	RC3H1	80	96.226	ENSPCOG00000021795	RC3H1	96	93.803	Propithecus_coquereli
ENSCCAG00000025652	RC3H1	100	85.966	ENSPVAG00000007593	RC3H1	100	85.878	Pteropus_vampyrus
ENSCCAG00000025652	RC3H1	98	63.383	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSCCAG00000025652	RC3H1	100	96.914	ENSRBIG00000037743	RC3H1	100	96.914	Rhinopithecus_bieti
ENSCCAG00000025652	RC3H1	100	96.823	ENSRROG00000036546	RC3H1	100	96.823	Rhinopithecus_roxellana
ENSCCAG00000025652	RC3H1	93	93.110	ENSSBOG00000010664	RC3H1	100	93.110	Saimiri_boliviensis_boliviensis
ENSCCAG00000025652	RC3H1	100	89.515	ENSSHAG00000007589	RC3H1	100	89.604	Sarcophilus_harrisii
ENSCCAG00000025652	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSCCAG00000025652	RC3H1	100	82.750	ENSSPUG00000018472	RC3H1	100	82.209	Sphenodon_punctatus
ENSCCAG00000025652	RC3H1	100	95.057	ENSSSCG00000015498	RC3H1	100	94.969	Sus_scrofa
ENSCCAG00000025652	RC3H1	100	85.965	ENSTGUG00000004090	RC3H1	100	85.877	Taeniopygia_guttata
ENSCCAG00000025652	RC3H1	93	90.033	ENSTBEG00000005015	RC3H1	93	90.033	Tupaia_belangeri
ENSCCAG00000025652	RC3H1	98	96.371	ENSTTRG00000008572	RC3H1	100	94.361	Tursiops_truncatus
ENSCCAG00000025652	RC3H1	98	96.364	ENSUAMG00000019525	RC3H1	100	94.175	Ursus_americanus
ENSCCAG00000025652	RC3H1	98	97.033	ENSUMAG00000020087	RC3H1	100	94.709	Ursus_maritimus
ENSCCAG00000025652	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSCCAG00000025652	RC3H1	98	96.663	ENSVVUG00000014201	RC3H1	100	94.459	Vulpes_vulpes
ENSCCAG00000025652	RC3H1	98	80.226	ENSXETG00000020030	rc3h1	100	77.225	Xenopus_tropicalis