EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000025671 (Gene tree)
Gene ID: 108306597
Gene Symbol: YBX2
Alias: CSDA3|Contrin|MSY2
Full Name: Y-box binding protein 2
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 6328 bases
Position: chrKV389498.1:6970815-6977142
Accession: 108306597
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000015745	CSD	PF00313.22	1.1e-25	1	1
ENSCCAP00000015759	CSD	PF00313.22	1.2e-25	1	1
ENSCCAP00000015756	CSD	PF00313.22	3.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000033203	YBX2-202	534	-	ENSCCAP00000015756	177 (aa)	-	A0A2K5QIN6
ENSCCAT00000033192	YBX2-201	1576	XM_017531668	ENSCCAP00000015745	363 (aa)	XP_017387157	A0A2K5QIR9
ENSCCAT00000033206	YBX2-203	1116	-	ENSCCAP00000015759	371 (aa)	-	A0A2K5QIQ1

Gene Model

Click here to download ENSCCAG00000025671's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000025671's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000025671	YBX2	83	90.909	ENSG00000006047	YBX2	99	88.957	Homo_sapiens
ENSCCAG00000025671	YBX2	57	99.010	ENSAMEG00000016564	YBX2	87	89.583	Ailuropoda_melanoleuca
ENSCCAG00000025671	YBX2	78	98.227	ENSANAG00000019540	YBX2	86	97.603	Aotus_nancymaae
ENSCCAG00000025671	YBX2	85	94.805	ENSBTAG00000009126	YBX2	84	95.364	Bos_taurus
ENSCCAG00000025671	YBX2	100	95.041	ENSCJAG00000016581	-	100	95.041	Callithrix_jacchus
ENSCCAG00000025671	YBX2	75	95.255	ENSCJAG00000042146	-	97	95.255	Callithrix_jacchus
ENSCCAG00000025671	YBX2	89	94.937	ENSCAFG00000016128	-	84	93.851	Canis_familiaris
ENSCCAG00000025671	YBX2	69	76.984	ENSCAFG00000005162	-	89	76.984	Canis_familiaris
ENSCCAG00000025671	YBX2	83	90.939	ENSCAFG00020008884	YBX2	84	90.939	Canis_lupus_dingo
ENSCCAG00000025671	YBX2	85	94.481	ENSCHIG00000016407	YBX2	84	95.033	Capra_hircus
ENSCCAG00000025671	YBX2	74	88.686	ENSTSYG00000030765	YBX2	92	88.686	Carlito_syrichta
ENSCCAG00000025671	YBX2	74	94.382	ENSCAPG00000011432	YBX2	100	94.382	Cavia_aperea
ENSCCAG00000025671	YBX2	83	94.702	ENSCPOG00000009543	YBX2	96	94.074	Cavia_porcellus
ENSCCAG00000025671	YBX2	89	95.570	ENSCATG00000036919	YBX2	84	94.371	Cercocebus_atys
ENSCCAG00000025671	YBX2	74	94.815	ENSCLAG00000010306	YBX2	96	94.815	Chinchilla_lanigera
ENSCCAG00000025671	YBX2	89	95.570	ENSCSAG00000011857	YBX2	84	94.371	Chlorocebus_sabaeus
ENSCCAG00000025671	YBX2	73	67.286	ENSCPBG00000022288	YBX2	85	69.145	Chrysemys_picta_bellii
ENSCCAG00000025671	YBX2	74	93.657	ENSCANG00000007129	YBX2	97	93.657	Colobus_angolensis_palliatus
ENSCCAG00000025671	YBX2	89	94.937	ENSCGRG00001000751	Ybx2	96	94.074	Cricetulus_griseus_chok1gshd
ENSCCAG00000025671	YBX2	74	94.052	ENSCGRG00000007683	Ybx2	99	93.704	Cricetulus_griseus_crigri
ENSCCAG00000025671	YBX2	74	92.222	ENSDNOG00000013746	YBX2	97	82.333	Dasypus_novemcinctus
ENSCCAG00000025671	YBX2	74	94.403	ENSDORG00000010882	Ybx2	95	94.403	Dipodomys_ordii
ENSCCAG00000025671	YBX2	82	90.268	ENSEASG00005018928	YBX2	83	90.136	Equus_asinus_asinus
ENSCCAG00000025671	YBX2	84	88.274	ENSECAG00000009996	YBX2	79	88.119	Equus_caballus
ENSCCAG00000025671	YBX2	82	95.623	ENSFCAG00000018097	YBX2	85	95.033	Felis_catus
ENSCCAG00000025671	YBX2	68	67.871	ENSGAGG00000016159	YBX2	86	73.896	Gopherus_agassizii
ENSCCAG00000025671	YBX2	89	95.570	ENSGGOG00000007399	YBX2	84	93.046	Gorilla_gorilla
ENSCCAG00000025671	YBX2	83	94.040	ENSHGLG00000014186	YBX2	84	94.040	Heterocephalus_glaber_female
ENSCCAG00000025671	YBX2	74	94.815	ENSSTOG00000008630	YBX2	99	94.815	Ictidomys_tridecemlineatus
ENSCCAG00000025671	YBX2	74	95.167	ENSJJAG00000013072	Ybx2	96	94.815	Jaculus_jaculus
ENSCCAG00000025671	YBX2	100	95.317	ENSLAFG00000014006	YBX2	100	95.317	Loxodonta_africana
ENSCCAG00000025671	YBX2	89	95.570	ENSMFAG00000039921	YBX2	84	94.371	Macaca_fascicularis
ENSCCAG00000025671	YBX2	89	95.570	ENSMNEG00000045221	YBX2	84	94.371	Macaca_nemestrina
ENSCCAG00000025671	YBX2	86	84.395	ENSMLEG00000039452	YBX2	97	94.030	Mandrillus_leucophaeus
ENSCCAG00000025671	YBX2	77	72.662	ENSMLEG00000029266	-	84	73.022	Mandrillus_leucophaeus
ENSCCAG00000025671	YBX2	89	94.937	ENSMAUG00000022062	Ybx2	84	95.033	Mesocricetus_auratus
ENSCCAG00000025671	YBX2	83	94.371	ENSMICG00000012453	YBX2	97	94.403	Microcebus_murinus
ENSCCAG00000025671	YBX2	89	93.671	ENSMOCG00000013958	Ybx2	96	94.815	Microtus_ochrogaster
ENSCCAG00000025671	YBX2	72	90.805	ENSMODG00000017596	YBX2	83	85.479	Monodelphis_domestica
ENSCCAG00000025671	YBX2	89	93.671	MGP_CAROLIEiJ_G0016606	Ybx2	96	94.815	Mus_caroli
ENSCCAG00000025671	YBX2	89	93.671	ENSMUSG00000018554	Ybx2	96	94.815	Mus_musculus
ENSCCAG00000025671	YBX2	89	93.671	MGP_PahariEiJ_G0017737	Ybx2	96	94.815	Mus_pahari
ENSCCAG00000025671	YBX2	89	93.671	MGP_SPRETEiJ_G0017442	Ybx2	96	94.815	Mus_spretus
ENSCCAG00000025671	YBX2	68	89.837	ENSMPUG00000010386	YBX2	93	89.837	Mustela_putorius_furo
ENSCCAG00000025671	YBX2	93	86.095	ENSMLUG00000004686	YBX2	90	87.748	Myotis_lucifugus
ENSCCAG00000025671	YBX2	89	91.139	ENSNGAG00000011707	Ybx2	85	93.046	Nannospalax_galili
ENSCCAG00000025671	YBX2	83	94.667	ENSNLEG00000008063	-	100	93.333	Nomascus_leucogenys
ENSCCAG00000025671	YBX2	72	68.148	ENSNLEG00000029527	-	63	71.429	Nomascus_leucogenys
ENSCCAG00000025671	YBX2	76	86.282	ENSMEUG00000006947	YBX2	89	85.382	Notamacropus_eugenii
ENSCCAG00000025671	YBX2	80	88.621	ENSOPRG00000013773	YBX2	100	88.276	Ochotona_princeps
ENSCCAG00000025671	YBX2	83	93.377	ENSODEG00000017530	YBX2	96	93.704	Octodon_degus
ENSCCAG00000025671	YBX2	86	83.654	ENSOCUG00000015064	YBX2	95	85.570	Oryctolagus_cuniculus
ENSCCAG00000025671	YBX2	74	94.030	ENSOGAG00000004392	YBX2	100	94.030	Otolemur_garnettii
ENSCCAG00000025671	YBX2	76	93.141	ENSOARG00000011562	YBX2	78	93.141	Ovis_aries
ENSCCAG00000025671	YBX2	81	91.030	ENSPPAG00000041892	YBX2	100	91.030	Pan_paniscus
ENSCCAG00000025671	YBX2	83	94.719	ENSPPRG00000000782	YBX2	85	95.710	Panthera_pardus
ENSCCAG00000025671	YBX2	86	81.410	ENSPTRG00000051288	-	85	92.105	Pan_troglodytes
ENSCCAG00000025671	YBX2	100	94.915	ENSPTRG00000008673	YBX2	100	94.915	Pan_troglodytes
ENSCCAG00000025671	YBX2	89	95.570	ENSPANG00000024250	YBX2	84	93.980	Papio_anubis
ENSCCAG00000025671	YBX2	76	71.841	ENSPANG00000032747	-	74	67.550	Papio_anubis
ENSCCAG00000025671	YBX2	74	69.928	ENSPSIG00000012364	YBX2	99	73.188	Pelodiscus_sinensis
ENSCCAG00000025671	YBX2	76	81.949	ENSPCIG00000028819	YBX2	85	89.540	Phascolarctos_cinereus
ENSCCAG00000025671	YBX2	84	92.484	ENSPCAG00000008019	YBX2	84	92.715	Procavia_capensis
ENSCCAG00000025671	YBX2	83	94.667	ENSPCOG00000006030	YBX2	84	94.371	Propithecus_coquereli
ENSCCAG00000025671	YBX2	85	83.819	ENSPVAG00000005050	YBX2	84	83.828	Pteropus_vampyrus
ENSCCAG00000025671	YBX2	89	94.304	ENSRNOG00000017117	Ybx2	84	95.033	Rattus_norvegicus
ENSCCAG00000025671	YBX2	86	95.425	ENSRBIG00000040919	YBX2	85	94.040	Rhinopithecus_bieti
ENSCCAG00000025671	YBX2	80	82.492	ENSRROG00000041728	YBX2	93	86.957	Rhinopithecus_roxellana
ENSCCAG00000025671	YBX2	90	85.417	ENSSBOG00000029566	YBX2	97	99.254	Saimiri_boliviensis_boliviensis
ENSCCAG00000025671	YBX2	77	86.071	ENSSHAG00000007786	YBX2	95	85.000	Sarcophilus_harrisii
ENSCCAG00000025671	YBX2	85	94.481	ENSSARG00000000488	YBX2	84	94.702	Sorex_araneus
ENSCCAG00000025671	YBX2	80	62.500	ENSSPUG00000018250	YBX2	99	67.677	Sphenodon_punctatus
ENSCCAG00000025671	YBX2	89	94.304	ENSSSCG00000017938	YBX2	84	96.026	Sus_scrofa
ENSCCAG00000025671	YBX2	83	92.000	ENSTBEG00000001266	YBX2	89	92.000	Tupaia_belangeri
ENSCCAG00000025671	YBX2	55	98.969	ENSTTRG00000009780	YBX2	56	98.969	Tursiops_truncatus
ENSCCAG00000025671	YBX2	72	89.098	ENSUAMG00000014725	YBX2	100	89.098	Ursus_americanus
ENSCCAG00000025671	YBX2	68	88.095	ENSUMAG00000015222	YBX2	90	88.095	Ursus_maritimus
ENSCCAG00000025671	YBX2	68	76.423	ENSVPAG00000003104	-	100	76.423	Vicugna_pacos
ENSCCAG00000025671	YBX2	69	83.730	ENSVVUG00000012111	-	77	83.730	Vulpes_vulpes
ENSCCAG00000025671	YBX2	72	88.806	ENSVVUG00000027830	-	100	88.806	Vulpes_vulpes