EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000025940 (Gene tree)
Gene ID: 108289830
Gene Symbol: RAB5C
Alias: RAB5CL|RABL
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 31372 bases
Position: chrKV389841.1:1083986-1115357
Accession: 108289830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000016313	MMR_HSR1	PF01926.23	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000033764	RAB5C-201	1704	XM_017509424	ENSCCAP00000016313	216 (aa)	XP_017364913	A0A2K5QK88

Gene Model

Click here to download ENSCCAG00000025940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000025940's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000025940	RAB5C	81	33.702	ENSCCAG00000031453	HRAS	94	33.702
ENSCCAG00000025940	RAB5C	81	31.250	ENSCCAG00000030751	RHEB	93	31.250
ENSCCAG00000025940	RAB5C	89	37.949	ENSCCAG00000031720	RAB35	96	37.949
ENSCCAG00000025940	RAB5C	55	31.967	ENSCCAG00000028492	ARL8B	62	31.967
ENSCCAG00000025940	RAB5C	90	48.454	ENSCCAG00000030930	RAB22A	98	48.454
ENSCCAG00000025940	RAB5C	75	40.361	ENSCCAG00000035680	RAB33A	70	40.361
ENSCCAG00000025940	RAB5C	75	36.585	ENSCCAG00000030469	RAB39B	77	36.585
ENSCCAG00000025940	RAB5C	81	37.143	ENSCCAG00000033681	RAB15	95	35.149
ENSCCAG00000025940	RAB5C	89	44.330	ENSCCAG00000021540	RAB1B	96	44.330
ENSCCAG00000025940	RAB5C	87	36.842	ENSCCAG00000022862	RAB12	90	33.632
ENSCCAG00000025940	RAB5C	89	43.590	ENSCCAG00000021869	RAB1A	95	43.590
ENSCCAG00000025940	RAB5C	75	31.902	ENSCCAG00000030765	-	85	31.902
ENSCCAG00000025940	RAB5C	89	35.354	ENSCCAG00000017991	RAB9A	97	35.354
ENSCCAG00000025940	RAB5C	89	35.354	ENSCCAG00000017812	RAB9B	97	35.354
ENSCCAG00000025940	RAB5C	89	37.500	ENSCCAG00000028502	-	95	37.500
ENSCCAG00000025940	RAB5C	73	31.250	ENSCCAG00000034632	RAB34	62	31.250
ENSCCAG00000025940	RAB5C	77	42.442	ENSCCAG00000036322	RAB7A	86	43.293
ENSCCAG00000025940	RAB5C	89	30.808	ENSCCAG00000025944	-	85	30.808
ENSCCAG00000025940	RAB5C	75	44.720	ENSCCAG00000025945	RAB2A	76	44.720
ENSCCAG00000025940	RAB5C	55	31.148	ENSCCAG00000007022	ARL8A	62	31.148
ENSCCAG00000025940	RAB5C	86	39.785	ENSCCAG00000020267	RAB14	87	39.785
ENSCCAG00000025940	RAB5C	90	42.029	ENSCCAG00000021286	RAB11A	94	42.029
ENSCCAG00000025940	RAB5C	80	35.838	ENSCCAG00000020364	RAB23	73	35.838
ENSCCAG00000025940	RAB5C	77	32.934	ENSCCAG00000031963	KRAS	95	30.387
ENSCCAG00000025940	RAB5C	85	41.799	ENSCCAG00000006762	RAB18	94	39.801
ENSCCAG00000025940	RAB5C	100	87.500	ENSCCAG00000022405	RAB5A	100	87.500
ENSCCAG00000025940	RAB5C	97	85.646	ENSCCAG00000019480	RAB5B	97	85.646
ENSCCAG00000025940	RAB5C	83	39.459	ENSCCAG00000026824	RAB30	91	39.459
ENSCCAG00000025940	RAB5C	77	33.333	ENSCCAG00000026139	RERG	84	33.333
ENSCCAG00000025940	RAB5C	90	42.512	ENSCCAG00000031042	RAB11B	87	49.682
ENSCCAG00000025940	RAB5C	62	39.098	ENSCCAG00000028745	RAB2B	75	39.098
ENSCCAG00000025940	RAB5C	93	37.681	ENSCCAG00000019859	RAB33B	86	38.384
ENSCCAG00000025940	RAB5C	94	41.379	ENSCCAG00000035269	RAB6B	98	41.379
ENSCCAG00000025940	RAB5C	76	33.333	ENSCCAG00000026041	-	84	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000025940	RAB5C	100	98.611	ENSG00000108774	RAB5C	100	99.194	Homo_sapiens
ENSCCAG00000025940	RAB5C	99	88.837	ENSAPOG00000016864	rab5c	98	91.163	Acanthochromis_polyacanthus
ENSCCAG00000025940	RAB5C	100	98.611	ENSAMEG00000006003	RAB5C	100	98.611	Ailuropoda_melanoleuca
ENSCCAG00000025940	RAB5C	99	88.426	ENSACIG00000010896	rab5c	98	90.278	Amphilophus_citrinellus
ENSCCAG00000025940	RAB5C	99	88.889	ENSAOCG00000016614	rab5c	98	91.204	Amphiprion_ocellaris
ENSCCAG00000025940	RAB5C	97	88.626	ENSAPEG00000017868	-	97	90.995	Amphiprion_percula
ENSCCAG00000025940	RAB5C	100	89.450	ENSATEG00000001937	rab5c	100	90.826	Anabas_testudineus
ENSCCAG00000025940	RAB5C	94	100.000	ENSANAG00000025390	RAB5C	100	100.000	Aotus_nancymaae
ENSCCAG00000025940	RAB5C	99	87.500	ENSACLG00000002706	rab5c	98	90.278	Astatotilapia_calliptera
ENSCCAG00000025940	RAB5C	96	89.100	ENSACLG00000008615	-	99	88.584	Astatotilapia_calliptera
ENSCCAG00000025940	RAB5C	96	88.571	ENSAMXG00000037267	-	99	90.952	Astyanax_mexicanus
ENSCCAG00000025940	RAB5C	99	89.401	ENSAMXG00000043717	rab5c	98	91.244	Astyanax_mexicanus
ENSCCAG00000025940	RAB5C	100	98.611	ENSBTAG00000006982	RAB5C	100	98.611	Bos_taurus
ENSCCAG00000025940	RAB5C	99	75.814	WBGene00004268	rab-5	99	75.814	Caenorhabditis_elegans
ENSCCAG00000025940	RAB5C	100	98.148	ENSCAFG00000015629	RAB5C	100	98.148	Canis_familiaris
ENSCCAG00000025940	RAB5C	100	98.148	ENSCAFG00020013537	RAB5C	100	98.148	Canis_lupus_dingo
ENSCCAG00000025940	RAB5C	100	98.611	ENSCHIG00000012960	RAB5C	100	98.611	Capra_hircus
ENSCCAG00000025940	RAB5C	100	99.074	ENSTSYG00000030531	RAB5C	100	99.074	Carlito_syrichta
ENSCCAG00000025940	RAB5C	100	98.611	ENSCATG00000040873	RAB5C	100	98.611	Cercocebus_atys
ENSCCAG00000025940	RAB5C	100	97.685	ENSCLAG00000016650	RAB5C	100	97.685	Chinchilla_lanigera
ENSCCAG00000025940	RAB5C	82	98.876	ENSCHOG00000009886	RAB5C	100	98.876	Choloepus_hoffmanni
ENSCCAG00000025940	RAB5C	99	76.168	ENSCING00000003340	-	99	76.168	Ciona_intestinalis
ENSCCAG00000025940	RAB5C	99	74.545	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSCCAG00000025940	RAB5C	100	98.611	ENSCGRG00001014226	Rab5c	100	98.611	Cricetulus_griseus_chok1gshd
ENSCCAG00000025940	RAB5C	100	98.611	ENSCGRG00000007534	Rab5c	100	98.611	Cricetulus_griseus_crigri
ENSCCAG00000025940	RAB5C	99	90.741	ENSCSEG00000017024	rab5c	98	90.741	Cynoglossus_semilaevis
ENSCCAG00000025940	RAB5C	99	88.889	ENSCVAG00000009550	rab5c	98	90.741	Cyprinodon_variegatus
ENSCCAG00000025940	RAB5C	100	98.611	ENSDNOG00000038853	RAB5C	100	98.611	Dasypus_novemcinctus
ENSCCAG00000025940	RAB5C	100	98.148	ENSDORG00000006819	Rab5c	100	98.148	Dipodomys_ordii
ENSCCAG00000025940	RAB5C	99	75.117	FBgn0014010	Rab5	95	75.117	Drosophila_melanogaster
ENSCCAG00000025940	RAB5C	99	79.070	ENSEBUG00000014794	rab5c	100	79.070	Eptatretus_burgeri
ENSCCAG00000025940	RAB5C	100	98.611	ENSEASG00005009281	RAB5C	100	98.611	Equus_asinus_asinus
ENSCCAG00000025940	RAB5C	100	99.074	ENSECAG00000025054	RAB5C	100	99.074	Equus_caballus
ENSCCAG00000025940	RAB5C	100	98.611	ENSEEUG00000002790	RAB5C	100	98.611	Erinaceus_europaeus
ENSCCAG00000025940	RAB5C	99	87.963	ENSELUG00000010439	-	98	87.963	Esox_lucius
ENSCCAG00000025940	RAB5C	99	87.500	ENSELUG00000018516	rab5c	99	89.815	Esox_lucius
ENSCCAG00000025940	RAB5C	100	98.611	ENSFCAG00000002148	RAB5C	100	98.611	Felis_catus
ENSCCAG00000025940	RAB5C	100	95.833	ENSFDAG00000021541	RAB5C	100	95.833	Fukomys_damarensis
ENSCCAG00000025940	RAB5C	99	90.783	ENSFHEG00000015268	-	99	90.783	Fundulus_heteroclitus
ENSCCAG00000025940	RAB5C	99	88.889	ENSFHEG00000012117	rab5c	98	90.741	Fundulus_heteroclitus
ENSCCAG00000025940	RAB5C	78	87.574	ENSGMOG00000001876	-	98	87.574	Gadus_morhua
ENSCCAG00000025940	RAB5C	99	87.500	ENSGMOG00000015096	rab5c	98	90.278	Gadus_morhua
ENSCCAG00000025940	RAB5C	96	90.952	ENSGAFG00000003642	-	99	88.182	Gambusia_affinis
ENSCCAG00000025940	RAB5C	99	89.352	ENSGAFG00000000884	rab5c	98	91.204	Gambusia_affinis
ENSCCAG00000025940	RAB5C	87	94.149	ENSGACG00000008659	rab5c	98	86.574	Gasterosteus_aculeatus
ENSCCAG00000025940	RAB5C	100	98.611	ENSGGOG00000005472	RAB5C	100	98.611	Gorilla_gorilla
ENSCCAG00000025940	RAB5C	96	89.100	ENSHBUG00000006823	-	99	88.584	Haplochromis_burtoni
ENSCCAG00000025940	RAB5C	99	87.500	ENSHBUG00000002014	rab5c	98	90.278	Haplochromis_burtoni
ENSCCAG00000025940	RAB5C	100	95.833	ENSHGLG00000012067	RAB5C	100	95.833	Heterocephalus_glaber_female
ENSCCAG00000025940	RAB5C	99	89.401	ENSHCOG00000004662	rab5c	97	90.783	Hippocampus_comes
ENSCCAG00000025940	RAB5C	97	81.604	ENSHCOG00000020238	-	100	80.000	Hippocampus_comes
ENSCCAG00000025940	RAB5C	96	87.619	ENSIPUG00000020082	rab5c	98	88.073	Ictalurus_punctatus
ENSCCAG00000025940	RAB5C	100	98.148	ENSSTOG00000006620	RAB5C	100	98.148	Ictidomys_tridecemlineatus
ENSCCAG00000025940	RAB5C	100	98.611	ENSJJAG00000021181	Rab5c	100	98.611	Jaculus_jaculus
ENSCCAG00000025940	RAB5C	99	88.479	ENSKMAG00000017417	-	99	88.479	Kryptolebias_marmoratus
ENSCCAG00000025940	RAB5C	99	88.426	ENSKMAG00000020038	rab5c	98	90.741	Kryptolebias_marmoratus
ENSCCAG00000025940	RAB5C	100	87.615	ENSLBEG00000010408	-	99	87.615	Labrus_bergylta
ENSCCAG00000025940	RAB5C	99	89.815	ENSLBEG00000004128	rab5c	98	91.667	Labrus_bergylta
ENSCCAG00000025940	RAB5C	99	93.458	ENSLOCG00000012566	rab5c	100	93.458	Lepisosteus_oculatus
ENSCCAG00000025940	RAB5C	100	98.611	ENSMFAG00000039627	RAB5C	100	98.611	Macaca_fascicularis
ENSCCAG00000025940	RAB5C	100	98.611	ENSMNEG00000000355	RAB5C	100	98.611	Macaca_nemestrina
ENSCCAG00000025940	RAB5C	99	87.963	ENSMAMG00000022322	rab5c	98	90.278	Mastacembelus_armatus
ENSCCAG00000025940	RAB5C	99	88.018	ENSMAMG00000016207	-	99	88.018	Mastacembelus_armatus
ENSCCAG00000025940	RAB5C	99	87.500	ENSMZEG00005022735	rab5c	98	90.278	Maylandia_zebra
ENSCCAG00000025940	RAB5C	96	89.100	ENSMZEG00005021090	-	99	88.584	Maylandia_zebra
ENSCCAG00000025940	RAB5C	100	99.537	ENSMAUG00000015005	Rab5c	100	99.537	Mesocricetus_auratus
ENSCCAG00000025940	RAB5C	100	98.611	ENSMICG00000041608	RAB5C	100	98.611	Microcebus_murinus
ENSCCAG00000025940	RAB5C	100	98.611	ENSMOCG00000018531	-	100	98.611	Microtus_ochrogaster
ENSCCAG00000025940	RAB5C	100	89.450	ENSMMOG00000020621	rab5c	99	89.450	Mola_mola
ENSCCAG00000025940	RAB5C	97	83.886	ENSMALG00000006052	rab5c	96	83.721	Monopterus_albus
ENSCCAG00000025940	RAB5C	99	87.615	ENSMALG00000022348	-	99	87.615	Monopterus_albus
ENSCCAG00000025940	RAB5C	100	99.074	MGP_CAROLIEiJ_G0017184	Rab5c	100	99.074	Mus_caroli
ENSCCAG00000025940	RAB5C	100	99.074	ENSMUSG00000019173	Rab5c	100	99.074	Mus_musculus
ENSCCAG00000025940	RAB5C	100	99.074	MGP_PahariEiJ_G0018314	Rab5c	100	99.074	Mus_pahari
ENSCCAG00000025940	RAB5C	100	99.074	MGP_SPRETEiJ_G0018027	Rab5c	100	99.074	Mus_spretus
ENSCCAG00000025940	RAB5C	100	98.611	ENSMPUG00000010554	RAB5C	100	98.611	Mustela_putorius_furo
ENSCCAG00000025940	RAB5C	100	98.148	ENSNGAG00000010286	Rab5c	100	98.148	Nannospalax_galili
ENSCCAG00000025940	RAB5C	96	89.100	ENSNBRG00000016922	-	99	88.584	Neolamprologus_brichardi
ENSCCAG00000025940	RAB5C	99	88.426	ENSNBRG00000018165	rab5c	98	91.204	Neolamprologus_brichardi
ENSCCAG00000025940	RAB5C	82	92.135	ENSOPRG00000008255	RAB5C	100	92.135	Ochotona_princeps
ENSCCAG00000025940	RAB5C	100	97.222	ENSODEG00000017920	RAB5C	100	97.222	Octodon_degus
ENSCCAG00000025940	RAB5C	99	88.426	ENSONIG00000001113	rab5c	98	91.204	Oreochromis_niloticus
ENSCCAG00000025940	RAB5C	100	88.073	ENSORLG00000003882	rab5c	100	89.450	Oryzias_latipes
ENSCCAG00000025940	RAB5C	100	88.991	ENSORLG00020008388	rab5c	100	88.991	Oryzias_latipes_hni
ENSCCAG00000025940	RAB5C	100	88.073	ENSORLG00015021900	rab5c	100	89.450	Oryzias_latipes_hsok
ENSCCAG00000025940	RAB5C	100	88.073	ENSOMEG00000023078	rab5c	100	89.450	Oryzias_melastigma
ENSCCAG00000025940	RAB5C	100	98.611	ENSOGAG00000009456	RAB5C	100	98.611	Otolemur_garnettii
ENSCCAG00000025940	RAB5C	100	98.611	ENSOARG00000018768	RAB5C	100	98.611	Ovis_aries
ENSCCAG00000025940	RAB5C	100	98.611	ENSPPAG00000037206	RAB5C	100	98.611	Pan_paniscus
ENSCCAG00000025940	RAB5C	100	98.611	ENSPPRG00000005745	RAB5C	100	98.611	Panthera_pardus
ENSCCAG00000025940	RAB5C	100	98.611	ENSPTIG00000008177	RAB5C	100	98.611	Panthera_tigris_altaica
ENSCCAG00000025940	RAB5C	100	98.611	ENSPTRG00000009194	RAB5C	100	98.611	Pan_troglodytes
ENSCCAG00000025940	RAB5C	99	89.302	ENSPKIG00000001237	-	99	89.302	Paramormyrops_kingsleyae
ENSCCAG00000025940	RAB5C	99	87.500	ENSPKIG00000020112	-	99	87.500	Paramormyrops_kingsleyae
ENSCCAG00000025940	RAB5C	99	86.574	ENSPMGG00000010792	rab5c	97	90.521	Periophthalmus_magnuspinnatus
ENSCCAG00000025940	RAB5C	100	98.611	ENSPEMG00000017971	Rab5c	100	98.611	Peromyscus_maniculatus_bairdii
ENSCCAG00000025940	RAB5C	99	78.378	ENSPMAG00000000008	rab5c	100	78.378	Petromyzon_marinus
ENSCCAG00000025940	RAB5C	99	79.070	ENSPMAG00000001399	rab5c	100	79.070	Petromyzon_marinus
ENSCCAG00000025940	RAB5C	99	78.505	ENSPMAG00000007867	rab5c	99	78.505	Petromyzon_marinus
ENSCCAG00000025940	RAB5C	100	96.759	ENSPCIG00000020225	-	100	96.759	Phascolarctos_cinereus
ENSCCAG00000025940	RAB5C	99	89.862	ENSPLAG00000016333	-	99	89.862	Poecilia_latipinna
ENSCCAG00000025940	RAB5C	99	89.352	ENSPLAG00000004790	rab5c	98	91.204	Poecilia_latipinna
ENSCCAG00000025940	RAB5C	98	88.263	ENSPMEG00000012614	-	98	88.584	Poecilia_mexicana
ENSCCAG00000025940	RAB5C	99	89.352	ENSPMEG00000011336	rab5c	98	91.204	Poecilia_mexicana
ENSCCAG00000025940	RAB5C	99	89.352	ENSPREG00000010146	rab5c	98	91.204	Poecilia_reticulata
ENSCCAG00000025940	RAB5C	87	92.063	ENSPREG00000022167	-	89	93.443	Poecilia_reticulata
ENSCCAG00000025940	RAB5C	100	98.611	ENSPPYG00000008398	RAB5C	100	98.611	Pongo_abelii
ENSCCAG00000025940	RAB5C	100	98.611	ENSPCAG00000016412	RAB5C	100	98.611	Procavia_capensis
ENSCCAG00000025940	RAB5C	100	98.148	ENSPCOG00000026327	RAB5C	100	98.148	Propithecus_coquereli
ENSCCAG00000025940	RAB5C	100	99.074	ENSPVAG00000003867	RAB5C	100	99.074	Pteropus_vampyrus
ENSCCAG00000025940	RAB5C	96	89.100	ENSPNYG00000015851	-	99	88.584	Pundamilia_nyererei
ENSCCAG00000025940	RAB5C	99	87.500	ENSPNYG00000010615	rab5c	98	90.278	Pundamilia_nyererei
ENSCCAG00000025940	RAB5C	99	90.783	ENSPNAG00000028138	rab5c	98	90.783	Pygocentrus_nattereri
ENSCCAG00000025940	RAB5C	97	86.792	ENSPNAG00000002218	-	99	89.151	Pygocentrus_nattereri
ENSCCAG00000025940	RAB5C	100	99.537	ENSRNOG00000018568	Rab5c	100	99.537	Rattus_norvegicus
ENSCCAG00000025940	RAB5C	100	98.611	ENSRBIG00000031376	RAB5C	100	98.611	Rhinopithecus_bieti
ENSCCAG00000025940	RAB5C	100	98.611	ENSRROG00000032895	RAB5C	100	98.611	Rhinopithecus_roxellana
ENSCCAG00000025940	RAB5C	100	100.000	ENSSBOG00000032552	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSCCAG00000025940	RAB5C	100	97.222	ENSSHAG00000005267	-	100	97.222	Sarcophilus_harrisii
ENSCCAG00000025940	RAB5C	99	87.558	ENSSFOG00015009988	-	99	87.558	Scleropages_formosus
ENSCCAG00000025940	RAB5C	96	91.827	ENSSMAG00000007323	rab5c	98	89.815	Scophthalmus_maximus
ENSCCAG00000025940	RAB5C	99	91.204	ENSSDUG00000023008	rab5c	98	91.204	Seriola_dumerili
ENSCCAG00000025940	RAB5C	99	90.741	ENSSLDG00000017771	rab5c	98	90.741	Seriola_lalandi_dorsalis
ENSCCAG00000025940	RAB5C	100	95.833	ENSSPUG00000012950	-	100	95.833	Sphenodon_punctatus
ENSCCAG00000025940	RAB5C	99	89.352	ENSSPAG00000006436	rab5c	98	92.130	Stegastes_partitus
ENSCCAG00000025940	RAB5C	100	98.611	ENSSSCG00000032467	RAB5C	100	98.611	Sus_scrofa
ENSCCAG00000025940	RAB5C	99	87.963	ENSTRUG00000015590	rab5c	98	90.278	Takifugu_rubripes
ENSCCAG00000025940	RAB5C	96	90.431	ENSTNIG00000011711	rab5c	95	90.431	Tetraodon_nigroviridis
ENSCCAG00000025940	RAB5C	100	98.611	ENSTBEG00000007092	RAB5C	100	98.611	Tupaia_belangeri
ENSCCAG00000025940	RAB5C	100	97.685	ENSTTRG00000006673	RAB5C	100	97.685	Tursiops_truncatus
ENSCCAG00000025940	RAB5C	100	98.611	ENSUAMG00000024343	RAB5C	100	98.611	Ursus_americanus
ENSCCAG00000025940	RAB5C	100	98.611	ENSUMAG00000023270	RAB5C	100	98.611	Ursus_maritimus
ENSCCAG00000025940	RAB5C	99	88.889	ENSXCOG00000016788	rab5c	98	91.204	Xiphophorus_couchianus
ENSCCAG00000025940	RAB5C	96	91.429	ENSXCOG00000006300	-	99	88.235	Xiphophorus_couchianus
ENSCCAG00000025940	RAB5C	99	89.352	ENSXMAG00000003266	rab5c	98	91.204	Xiphophorus_maculatus
ENSCCAG00000025940	RAB5C	99	90.323	ENSXMAG00000022179	-	99	90.323	Xiphophorus_maculatus