EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000025944 (Gene tree)
Gene ID: 108286853
Gene Symbol: -
Alias: -
Full Name: RAB%2C member of RAS oncogene family like 2B
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 13514 bases
Position: chrKV389755.1:3454332-3467845
Accession: 108286853
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000016363	MMR_HSR1	PF01926.23	4.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000033814	-	1878	XM_017504973	ENSCCAP00000016363	229 (aa)	XP_017360462	A0A2K5QKE3
ENSCCAT00000033839	-	498	-	ENSCCAP00000016389	165 (aa)	-	A0A2K5QKG7
ENSCCAT00000033843	-	300	-	ENSCCAP00000016392	99 (aa)	-	A0A2K5QKH9

Gene Model

Click here to download ENSCCAG00000025944's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000025944's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000025944	-	63	37.584	ENSCCAG00000006762	RAB18	72	37.584
ENSCCAG00000025944	-	50	30.233	ENSCCAG00000025990	-	96	30.233
ENSCCAG00000025944	-	65	36.538	ENSCCAG00000021869	RAB1A	75	36.538
ENSCCAG00000025944	-	65	35.294	ENSCCAG00000022405	RAB5A	71	35.294
ENSCCAG00000025944	-	74	30.814	ENSCCAG00000031720	RAB35	86	30.814
ENSCCAG00000025944	-	65	31.373	ENSCCAG00000035269	RAB6B	74	31.373
ENSCCAG00000025944	-	67	36.306	ENSCCAG00000031042	RAB11B	87	36.306
ENSCCAG00000025944	-	67	31.013	ENSCCAG00000028502	-	78	31.013
ENSCCAG00000025944	-	50	39.130	ENSCCAG00000019480	RAB5B	71	39.130
ENSCCAG00000025944	-	65	37.255	ENSCCAG00000021286	RAB11A	71	37.255
ENSCCAG00000025944	-	63	30.464	ENSCCAG00000035799	-	77	31.481
ENSCCAG00000025944	-	67	31.875	ENSCCAG00000030469	RAB39B	75	31.875
ENSCCAG00000025944	-	65	38.065	ENSCCAG00000021540	RAB1B	76	38.065
ENSCCAG00000025944	-	69	34.337	ENSCCAG00000036322	RAB7A	87	34.337
ENSCCAG00000025944	-	50	30.435	ENSCCAG00000026041	-	60	30.435
ENSCCAG00000025944	-	71	35.294	ENSCCAG00000030930	RAB22A	86	35.294
ENSCCAG00000025944	-	72	34.682	ENSCCAG00000019859	RAB33B	64	36.735
ENSCCAG00000025944	-	85	30.808	ENSCCAG00000025940	RAB5C	89	30.808
ENSCCAG00000025944	-	65	33.987	ENSCCAG00000025945	RAB2A	70	36.641
ENSCCAG00000025944	-	54	30.370	ENSCCAG00000022484	ARFRP1	71	36.364
ENSCCAG00000025944	-	71	34.286	ENSCCAG00000017991	RAB9A	85	34.286
ENSCCAG00000025944	-	73	32.961	ENSCCAG00000017812	RAB9B	88	32.961
ENSCCAG00000025944	-	67	33.962	ENSCCAG00000022862	RAB12	67	33.537
ENSCCAG00000025944	-	68	35.404	ENSCCAG00000035680	RAB33A	67	35.404
ENSCCAG00000025944	-	74	34.463	ENSCCAG00000026824	RAB30	86	34.463
ENSCCAG00000025944	-	72	36.686	ENSCCAG00000020267	RAB14	77	36.686
ENSCCAG00000025944	-	65	30.128	ENSCCAG00000034632	RAB34	60	30.128

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000025944	-	100	96.070	ENSG00000079974	RABL2B	100	96.970	Homo_sapiens
ENSCCAG00000025944	-	100	95.633	ENSG00000144134	RABL2A	100	97.222	Homo_sapiens
ENSCCAG00000025944	-	96	74.091	ENSAPOG00000023708	rabl2	99	74.091	Acanthochromis_polyacanthus
ENSCCAG00000025944	-	97	87.111	ENSAMEG00000003173	-	99	87.111	Ailuropoda_melanoleuca
ENSCCAG00000025944	-	96	71.818	ENSACIG00000000670	rabl2	99	71.818	Amphilophus_citrinellus
ENSCCAG00000025944	-	96	74.545	ENSAOCG00000008069	rabl2	99	74.545	Amphiprion_ocellaris
ENSCCAG00000025944	-	96	73.636	ENSAPEG00000003164	rabl2	99	73.636	Amphiprion_percula
ENSCCAG00000025944	-	96	74.545	ENSATEG00000001111	rabl2	99	74.545	Anabas_testudineus
ENSCCAG00000025944	-	72	85.976	ENSACAG00000000418	-	93	85.976	Anolis_carolinensis
ENSCCAG00000025944	-	100	97.380	ENSANAG00000021001	-	100	97.380	Aotus_nancymaae
ENSCCAG00000025944	-	96	74.545	ENSACLG00000025632	rabl2	99	74.545	Astatotilapia_calliptera
ENSCCAG00000025944	-	93	78.404	ENSAMXG00000040611	rabl2	96	78.404	Astyanax_mexicanus
ENSCCAG00000025944	-	94	83.929	ENSBTAG00000004876	RABL2B	99	84.821	Bos_taurus
ENSCCAG00000025944	-	100	96.507	ENSCJAG00000018414	-	100	96.507	Callithrix_jacchus
ENSCCAG00000025944	-	97	90.045	ENSCAFG00020006938	-	99	90.045	Canis_lupus_dingo
ENSCCAG00000025944	-	97	83.406	ENSCHIG00000000591	-	99	83.843	Capra_hircus
ENSCCAG00000025944	-	100	87.773	ENSTSYG00000004323	-	100	87.773	Carlito_syrichta
ENSCCAG00000025944	-	95	91.705	ENSCPOG00000026899	-	98	91.705	Cavia_porcellus
ENSCCAG00000025944	-	100	93.886	ENSCATG00000034307	-	100	93.886	Cercocebus_atys
ENSCCAG00000025944	-	97	90.498	ENSCLAG00000017218	-	99	90.498	Chinchilla_lanigera
ENSCCAG00000025944	-	100	93.939	ENSCSAG00000004698	-	100	93.939	Chlorocebus_sabaeus
ENSCCAG00000025944	-	93	81.132	ENSCPBG00000011715	-	94	81.132	Chrysemys_picta_bellii
ENSCCAG00000025944	-	82	65.957	ENSCING00000004961	-	87	65.957	Ciona_intestinalis
ENSCCAG00000025944	-	78	68.539	ENSCSAVG00000006042	-	86	68.539	Ciona_savignyi
ENSCCAG00000025944	-	100	92.576	ENSCANG00000030879	-	100	92.576	Colobus_angolensis_palliatus
ENSCCAG00000025944	-	97	89.140	ENSCGRG00001021894	Rabl2	99	89.140	Cricetulus_griseus_chok1gshd
ENSCCAG00000025944	-	89	75.862	ENSCSEG00000005479	rabl2	93	75.481	Cynoglossus_semilaevis
ENSCCAG00000025944	-	93	74.057	ENSCVAG00000011432	rabl2	96	74.057	Cyprinodon_variegatus
ENSCCAG00000025944	-	95	74.312	ENSDARG00000063321	rabl2	99	74.312	Danio_rerio
ENSCCAG00000025944	-	97	90.498	ENSDNOG00000035151	-	99	90.498	Dasypus_novemcinctus
ENSCCAG00000025944	-	97	90.950	ENSDORG00000000003	Rabl2	99	90.950	Dipodomys_ordii
ENSCCAG00000025944	-	97	88.688	ENSEASG00005008239	-	99	88.688	Equus_asinus_asinus
ENSCCAG00000025944	-	97	88.235	ENSECAG00000026942	-	99	88.235	Equus_caballus
ENSCCAG00000025944	-	97	89.593	ENSFCAG00000033642	-	99	89.593	Felis_catus
ENSCCAG00000025944	-	100	86.900	ENSFDAG00000002113	-	100	86.900	Fukomys_damarensis
ENSCCAG00000025944	-	99	71.681	ENSFHEG00000015015	rabl2	85	71.681	Fundulus_heteroclitus
ENSCCAG00000025944	-	86	76.142	ENSGMOG00000018928	rabl2	100	76.142	Gadus_morhua
ENSCCAG00000025944	-	96	76.364	ENSGALG00000032458	RABL2B	99	76.364	Gallus_gallus
ENSCCAG00000025944	-	88	76.119	ENSGAFG00000005188	rabl2	95	74.882	Gambusia_affinis
ENSCCAG00000025944	-	96	73.182	ENSGACG00000012474	rabl2	99	73.182	Gasterosteus_aculeatus
ENSCCAG00000025944	-	96	74.545	ENSHBUG00000010964	rabl2	99	74.545	Haplochromis_burtoni
ENSCCAG00000025944	-	97	90.045	ENSHGLG00000005750	-	99	90.045	Heterocephalus_glaber_female
ENSCCAG00000025944	-	97	90.045	ENSHGLG00100016281	-	99	90.045	Heterocephalus_glaber_male
ENSCCAG00000025944	-	97	93.213	ENSSTOG00000002723	-	99	93.213	Ictidomys_tridecemlineatus
ENSCCAG00000025944	-	97	89.140	ENSJJAG00000010792	Rabl2	99	89.140	Jaculus_jaculus
ENSCCAG00000025944	-	96	74.545	ENSKMAG00000012723	rabl2	99	74.545	Kryptolebias_marmoratus
ENSCCAG00000025944	-	96	74.091	ENSLBEG00000003644	rabl2	99	74.091	Labrus_bergylta
ENSCCAG00000025944	-	95	77.523	ENSLACG00000003722	rabl2	97	77.523	Latimeria_chalumnae
ENSCCAG00000025944	-	95	78.341	ENSLOCG00000016767	rabl2	96	78.341	Lepisosteus_oculatus
ENSCCAG00000025944	-	100	94.760	ENSMFAG00000044775	-	100	94.760	Macaca_fascicularis
ENSCCAG00000025944	-	100	94.760	ENSMMUG00000022914	RABL2B	100	94.760	Macaca_mulatta
ENSCCAG00000025944	-	100	93.886	ENSMNEG00000028460	-	100	93.886	Macaca_nemestrina
ENSCCAG00000025944	-	100	93.450	ENSMLEG00000032621	-	100	93.450	Mandrillus_leucophaeus
ENSCCAG00000025944	-	96	73.182	ENSMAMG00000008168	rabl2	99	73.182	Mastacembelus_armatus
ENSCCAG00000025944	-	90	76.214	ENSMZEG00005019758	rabl2	95	76.214	Maylandia_zebra
ENSCCAG00000025944	-	97	88.235	ENSMAUG00000010955	Rabl2	99	88.235	Mesocricetus_auratus
ENSCCAG00000025944	-	100	93.013	ENSMICG00000031301	-	100	93.013	Microcebus_murinus
ENSCCAG00000025944	-	97	88.235	ENSMOCG00000002775	Rabl2	99	88.235	Microtus_ochrogaster
ENSCCAG00000025944	-	94	85.714	ENSMODG00000010838	-	99	85.714	Monodelphis_domestica
ENSCCAG00000025944	-	96	73.636	ENSMALG00000005944	rabl2	99	73.636	Monopterus_albus
ENSCCAG00000025944	-	97	85.520	MGP_CAROLIEiJ_G0020176	Rabl2	98	85.520	Mus_caroli
ENSCCAG00000025944	-	97	85.068	ENSMUSG00000022621	Rabl2	99	85.068	Mus_musculus
ENSCCAG00000025944	-	97	85.520	MGP_PahariEiJ_G0020181	Rabl2	99	85.520	Mus_pahari
ENSCCAG00000025944	-	97	84.615	MGP_SPRETEiJ_G0021073	Rabl2	99	84.615	Mus_spretus
ENSCCAG00000025944	-	97	88.688	ENSMPUG00000001806	-	99	88.688	Mustela_putorius_furo
ENSCCAG00000025944	-	96	86.758	ENSNGAG00000012843	Rabl2	95	86.758	Nannospalax_galili
ENSCCAG00000025944	-	96	74.545	ENSNBRG00000000489	rabl2	99	74.545	Neolamprologus_brichardi
ENSCCAG00000025944	-	100	94.760	ENSNLEG00000030435	-	100	94.760	Nomascus_leucogenys
ENSCCAG00000025944	-	95	90.367	ENSODEG00000015650	-	98	90.367	Octodon_degus
ENSCCAG00000025944	-	100	72.294	ENSONIG00000014885	rabl2	99	75.000	Oreochromis_niloticus
ENSCCAG00000025944	-	92	73.810	ENSORLG00000009874	rabl2	93	73.810	Oryzias_latipes
ENSCCAG00000025944	-	92	73.810	ENSORLG00020001721	rabl2	93	73.810	Oryzias_latipes_hni
ENSCCAG00000025944	-	92	73.810	ENSORLG00015014268	rabl2	93	73.810	Oryzias_latipes_hsok
ENSCCAG00000025944	-	92	74.762	ENSOMEG00000008576	rabl2	97	74.762	Oryzias_melastigma
ENSCCAG00000025944	-	100	92.140	ENSOGAG00000009123	-	100	92.140	Otolemur_garnettii
ENSCCAG00000025944	-	100	85.714	ENSPPRG00000014642	-	100	85.714	Panthera_pardus
ENSCCAG00000025944	-	97	89.593	ENSPTIG00000018747	-	99	89.593	Panthera_tigris_altaica
ENSCCAG00000025944	-	100	90.795	ENSPTRG00000014555	-	100	90.795	Pan_troglodytes
ENSCCAG00000025944	-	100	89.540	ENSPANG00000036121	-	100	89.540	Papio_anubis
ENSCCAG00000025944	-	89	79.412	ENSPKIG00000025372	rabl2	91	79.412	Paramormyrops_kingsleyae
ENSCCAG00000025944	-	92	83.412	ENSPSIG00000014041	-	93	83.412	Pelodiscus_sinensis
ENSCCAG00000025944	-	86	75.635	ENSPMGG00000012946	rabl2	96	75.635	Periophthalmus_magnuspinnatus
ENSCCAG00000025944	-	97	86.878	ENSPEMG00000024045	Rabl2	99	86.878	Peromyscus_maniculatus_bairdii
ENSCCAG00000025944	-	96	85.000	ENSPCIG00000012436	-	89	85.000	Phascolarctos_cinereus
ENSCCAG00000025944	-	91	75.355	ENSPFOG00000017960	rabl2	95	75.355	Poecilia_formosa
ENSCCAG00000025944	-	91	76.077	ENSPLAG00000015685	rabl2	95	76.077	Poecilia_latipinna
ENSCCAG00000025944	-	91	76.077	ENSPMEG00000004703	rabl2	95	76.077	Poecilia_mexicana
ENSCCAG00000025944	-	86	76.650	ENSPREG00000014761	rabl2	94	78.836	Poecilia_reticulata
ENSCCAG00000025944	-	100	94.323	ENSPPYG00000012000	-	100	94.323	Pongo_abelii
ENSCCAG00000025944	-	100	93.450	ENSPCOG00000024865	-	100	93.450	Propithecus_coquereli
ENSCCAG00000025944	-	99	83.193	ENSPVAG00000004539	-	100	83.193	Pteropus_vampyrus
ENSCCAG00000025944	-	96	74.545	ENSPNYG00000004845	rabl2	99	74.545	Pundamilia_nyererei
ENSCCAG00000025944	-	88	81.095	ENSPNAG00000024254	rabl2	100	76.339	Pygocentrus_nattereri
ENSCCAG00000025944	-	97	86.425	ENSRNOG00000013947	Rabl2	88	86.425	Rattus_norvegicus
ENSCCAG00000025944	-	100	92.576	ENSRBIG00000033607	-	100	92.576	Rhinopithecus_bieti
ENSCCAG00000025944	-	100	94.323	ENSRROG00000031130	-	100	94.323	Rhinopithecus_roxellana
ENSCCAG00000025944	-	100	99.127	ENSSBOG00000033266	-	100	99.127	Saimiri_boliviensis_boliviensis
ENSCCAG00000025944	-	97	71.946	ENSSFOG00015020738	rabl2	98	75.688	Scleropages_formosus
ENSCCAG00000025944	-	96	74.429	ENSSMAG00000004606	rabl2	98	74.429	Scophthalmus_maximus
ENSCCAG00000025944	-	96	74.091	ENSSDUG00000014765	rabl2	99	74.091	Seriola_dumerili
ENSCCAG00000025944	-	74	91.765	ENSSSCG00000025041	-	100	91.765	Sus_scrofa
ENSCCAG00000025944	-	89	76.961	ENSTGUG00000016028	-	98	76.961	Taeniopygia_guttata
ENSCCAG00000025944	-	96	73.636	ENSTRUG00000012454	rabl2	99	73.636	Takifugu_rubripes
ENSCCAG00000025944	-	96	73.182	ENSTNIG00000017951	rabl2	99	73.182	Tetraodon_nigroviridis
ENSCCAG00000025944	-	100	82.969	ENSUAMG00000015761	-	98	82.969	Ursus_americanus
ENSCCAG00000025944	-	97	89.593	ENSUMAG00000017116	-	99	89.593	Ursus_maritimus
ENSCCAG00000025944	-	97	89.140	ENSVVUG00000025761	-	99	89.140	Vulpes_vulpes
ENSCCAG00000025944	-	100	75.325	ENSXETG00000015712	rabl2b	100	75.325	Xenopus_tropicalis
ENSCCAG00000025944	-	92	75.829	ENSXMAG00000004569	rabl2	95	75.829	Xiphophorus_maculatus