EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000026018 (Gene tree)
Gene ID: 108313720
Gene Symbol: -
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 5658 bases
Position: chrKV389567.1:3688409-3694066
Accession: 108313720
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000016454	RRM_1	PF00076.22	1.3e-32	1	2
ENSCCAP00000016454	RRM_1	PF00076.22	1.3e-32	2	2
ENSCCAP00000016464	RRM_1	PF00076.22	3.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000033915	-	408	-	ENSCCAP00000016464	135 (aa)	-	A0A2K5QKN9
ENSCCAT00000033905	-	3711	XM_017542236	ENSCCAP00000016454	344 (aa)	XP_017397725	A0A2K5QKM9

Gene Model

Click here to download ENSCCAG00000026018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000026018's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000026018	-	75	30.693	ENSCCAG00000019303	RBM14	59	32.143
ENSCCAG00000026018	-	50	71.642	ENSCCAG00000029002	SRSF5	86	62.295
ENSCCAG00000026018	-	94	67.178	ENSCCAG00000018540	-	62	87.766
ENSCCAG00000026018	-	62	32.143	ENSCCAG00000007508	-	59	32.143
ENSCCAG00000026018	-	51	47.297	ENSCCAG00000036053	SRSF9	71	41.143
ENSCCAG00000026018	-	53	32.877	ENSCCAG00000025003	RALYL	61	34.921
ENSCCAG00000026018	-	52	42.857	ENSCCAG00000000257	-	50	42.857
ENSCCAG00000026018	-	62	32.143	ENSCCAG00000016501	RBM4B	57	32.143
ENSCCAG00000026018	-	56	46.835	ENSCCAG00000032244	SRSF3	64	46.835
ENSCCAG00000026018	-	56	35.714	ENSCCAG00000037368	-	87	35.714
ENSCCAG00000026018	-	58	40.670	ENSCCAG00000029484	-	77	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000026018	-	100	100.000	ENSG00000124193	SRSF6	100	100.000	Homo_sapiens
ENSCCAG00000026018	-	58	93.590	ENSAPOG00000016635	-	84	83.088	Acanthochromis_polyacanthus
ENSCCAG00000026018	-	94	85.231	ENSAMEG00000003710	SRSF6	94	84.969	Ailuropoda_melanoleuca
ENSCCAG00000026018	-	94	62.462	ENSACIG00000020091	-	95	80.315	Amphilophus_citrinellus
ENSCCAG00000026018	-	86	68.581	ENSACIG00000023658	-	56	87.778	Amphilophus_citrinellus
ENSCCAG00000026018	-	65	82.955	ENSAOCG00000004309	-	57	83.152	Amphiprion_ocellaris
ENSCCAG00000026018	-	92	67.939	ENSAOCG00000019438	-	98	67.939	Amphiprion_ocellaris
ENSCCAG00000026018	-	98	61.871	ENSAPEG00000013086	-	53	88.172	Amphiprion_percula
ENSCCAG00000026018	-	66	83.146	ENSATEG00000007255	-	71	80.000	Anabas_testudineus
ENSCCAG00000026018	-	94	82.099	ENSACAG00000002061	SRSF6	93	84.615	Anolis_carolinensis
ENSCCAG00000026018	-	100	100.000	ENSANAG00000024080	SRSF6	100	100.000	Aotus_nancymaae
ENSCCAG00000026018	-	54	89.041	ENSACLG00000024373	-	96	79.570	Astatotilapia_calliptera
ENSCCAG00000026018	-	55	93.243	ENSAMXG00000003101	-	89	60.778	Astyanax_mexicanus
ENSCCAG00000026018	-	55	91.892	ENSAMXG00000042692	-	96	78.519	Astyanax_mexicanus
ENSCCAG00000026018	-	100	99.259	ENSBTAG00000008527	SRSF6	100	99.259	Bos_taurus
ENSCCAG00000026018	-	100	100.000	ENSCJAG00000048403	SRSF6	100	100.000	Callithrix_jacchus
ENSCCAG00000026018	-	100	99.259	ENSCAFG00000009289	SRSF6	100	99.259	Canis_familiaris
ENSCCAG00000026018	-	100	99.259	ENSCAFG00020013559	SRSF6	100	99.259	Canis_lupus_dingo
ENSCCAG00000026018	-	100	99.259	ENSCHIG00000015890	-	100	99.259	Capra_hircus
ENSCCAG00000026018	-	100	96.532	ENSCHIG00000009148	-	100	96.532	Capra_hircus
ENSCCAG00000026018	-	93	81.677	ENSTSYG00000026476	SRSF6	93	78.769	Carlito_syrichta
ENSCCAG00000026018	-	100	100.000	ENSCPOG00000011761	SRSF6	100	100.000	Cavia_porcellus
ENSCCAG00000026018	-	100	100.000	ENSCATG00000030794	SRSF6	100	100.000	Cercocebus_atys
ENSCCAG00000026018	-	100	100.000	ENSCLAG00000010247	SRSF6	100	100.000	Chinchilla_lanigera
ENSCCAG00000026018	-	100	98.837	ENSCSAG00000014022	SRSF6	100	98.837	Chlorocebus_sabaeus
ENSCCAG00000026018	-	100	82.659	ENSCHOG00000000561	SRSF6	77	100.000	Choloepus_hoffmanni
ENSCCAG00000026018	-	58	97.436	ENSCPBG00000018200	SRSF6	94	85.061	Chrysemys_picta_bellii
ENSCCAG00000026018	-	100	98.547	ENSCANG00000037774	-	100	98.547	Colobus_angolensis_palliatus
ENSCCAG00000026018	-	100	84.302	ENSCANG00000042529	-	100	84.302	Colobus_angolensis_palliatus
ENSCCAG00000026018	-	100	98.519	ENSCGRG00001022339	Srsf6	100	98.519	Cricetulus_griseus_chok1gshd
ENSCCAG00000026018	-	56	97.409	ENSCGRG00000006618	Srsf6	92	96.907	Cricetulus_griseus_crigri
ENSCCAG00000026018	-	58	93.590	ENSCSEG00000019778	SRSF6	90	84.252	Cynoglossus_semilaevis
ENSCCAG00000026018	-	58	92.308	ENSCVAG00000001863	SRSF6	95	85.039	Cyprinodon_variegatus
ENSCCAG00000026018	-	55	90.541	ENSDARG00000016783	srsf6b	87	89.157	Danio_rerio
ENSCCAG00000026018	-	94	95.988	ENSDNOG00000008410	SRSF6	94	95.988	Dasypus_novemcinctus
ENSCCAG00000026018	-	100	100.000	ENSDORG00000028378	Srsf6	100	100.000	Dipodomys_ordii
ENSCCAG00000026018	-	92	92.500	ENSETEG00000006221	SRSF6	94	89.846	Echinops_telfairi
ENSCCAG00000026018	-	100	96.532	ENSEASG00005023429	SRSF6	100	96.532	Equus_asinus_asinus
ENSCCAG00000026018	-	100	96.532	ENSECAG00000023932	SRSF6	100	96.532	Equus_caballus
ENSCCAG00000026018	-	56	92.821	ENSEEUG00000002324	SRSF6	90	92.929	Erinaceus_europaeus
ENSCCAG00000026018	-	98	59.286	ENSELUG00000024182	SRSF6	85	87.356	Esox_lucius
ENSCCAG00000026018	-	73	77.778	ENSELUG00000013506	SRSF6	88	77.778	Esox_lucius
ENSCCAG00000026018	-	100	96.821	ENSFCAG00000032814	SRSF6	100	96.821	Felis_catus
ENSCCAG00000026018	-	94	81.481	ENSFDAG00000012191	SRSF6	94	78.462	Fukomys_damarensis
ENSCCAG00000026018	-	89	70.418	ENSFHEG00000023065	srsf6a	55	87.500	Fundulus_heteroclitus
ENSCCAG00000026018	-	56	90.789	ENSGMOG00000014458	srsf6a	52	78.646	Gadus_morhua
ENSCCAG00000026018	-	61	76.829	ENSGMOG00000006105	srsf6a	62	70.391	Gadus_morhua
ENSCCAG00000026018	-	100	97.037	ENSGALG00000000990	SRSF6	100	97.037	Gallus_gallus
ENSCCAG00000026018	-	58	92.308	ENSGAFG00000019088	-	72	82.400	Gambusia_affinis
ENSCCAG00000026018	-	98	61.194	ENSGACG00000006084	srsf6a	53	82.796	Gasterosteus_aculeatus
ENSCCAG00000026018	-	58	97.436	ENSGAGG00000003238	SRSF6	94	85.061	Gopherus_agassizii
ENSCCAG00000026018	-	100	100.000	ENSGGOG00000009808	SRSF6	100	100.000	Gorilla_gorilla
ENSCCAG00000026018	-	56	89.474	ENSHBUG00000006386	-	58	83.696	Haplochromis_burtoni
ENSCCAG00000026018	-	90	75.719	ENSHGLG00000007701	-	58	79.144	Heterocephalus_glaber_female
ENSCCAG00000026018	-	100	100.000	ENSHGLG00000007348	SRSF6	100	100.000	Heterocephalus_glaber_female
ENSCCAG00000026018	-	94	81.790	ENSHGLG00100005043	SRSF6	94	78.769	Heterocephalus_glaber_male
ENSCCAG00000026018	-	58	89.744	ENSHCOG00000002740	srsf6a	57	83.152	Hippocampus_comes
ENSCCAG00000026018	-	100	100.000	ENSSTOG00000010866	SRSF6	100	100.000	Ictidomys_tridecemlineatus
ENSCCAG00000026018	-	56	95.288	ENSJJAG00000020690	Srsf6	91	95.337	Jaculus_jaculus
ENSCCAG00000026018	-	54	93.151	ENSKMAG00000011934	srsf6a	59	85.870	Kryptolebias_marmoratus
ENSCCAG00000026018	-	58	92.308	ENSLBEG00000007356	srsf6a	52	85.484	Labrus_bergylta
ENSCCAG00000026018	-	89	82.581	ENSLACG00000005466	SRSF6	54	91.848	Latimeria_chalumnae
ENSCCAG00000026018	-	69	94.979	ENSLAFG00000006682	SRSF6	89	94.783	Loxodonta_africana
ENSCCAG00000026018	-	100	100.000	ENSMFAG00000036925	SRSF6	100	100.000	Macaca_fascicularis
ENSCCAG00000026018	-	100	100.000	ENSMMUG00000006742	SRSF6	100	100.000	Macaca_mulatta
ENSCCAG00000026018	-	100	98.519	ENSMNEG00000027392	-	100	98.519	Macaca_nemestrina
ENSCCAG00000026018	-	100	97.384	ENSMNEG00000038270	-	100	97.384	Macaca_nemestrina
ENSCCAG00000026018	-	63	98.140	ENSMLEG00000031524	SRSF6	100	98.140	Mandrillus_leucophaeus
ENSCCAG00000026018	-	63	87.059	ENSMAMG00000023477	-	89	87.059	Mastacembelus_armatus
ENSCCAG00000026018	-	98	61.871	ENSMAMG00000017161	srsf6a	53	87.634	Mastacembelus_armatus
ENSCCAG00000026018	-	56	89.474	ENSMZEG00005008032	-	57	83.696	Maylandia_zebra
ENSCCAG00000026018	-	98	58.333	ENSMZEG00005020658	-	60	82.873	Maylandia_zebra
ENSCCAG00000026018	-	100	98.519	ENSMAUG00000019086	-	100	98.519	Mesocricetus_auratus
ENSCCAG00000026018	-	100	100.000	ENSMICG00000008537	SRSF6	100	100.000	Microcebus_murinus
ENSCCAG00000026018	-	56	97.409	ENSMOCG00000018738	Srsf6	92	96.907	Microtus_ochrogaster
ENSCCAG00000026018	-	58	92.308	ENSMMOG00000015241	-	78	90.361	Mola_mola
ENSCCAG00000026018	-	58	97.436	ENSMODG00000003107	SRSF6	95	91.104	Monodelphis_domestica
ENSCCAG00000026018	-	100	98.519	MGP_CAROLIEiJ_G0024606	Srsf6	100	98.519	Mus_caroli
ENSCCAG00000026018	-	100	98.519	ENSMUSG00000016921	Srsf6	100	98.519	Mus_musculus
ENSCCAG00000026018	-	100	98.519	MGP_PahariEiJ_G0026050	Srsf6	100	98.519	Mus_pahari
ENSCCAG00000026018	-	100	98.519	MGP_SPRETEiJ_G0025528	Srsf6	100	98.519	Mus_spretus
ENSCCAG00000026018	-	83	97.569	ENSMPUG00000017692	SRSF6	99	97.569	Mustela_putorius_furo
ENSCCAG00000026018	-	93	80.124	ENSMLUG00000016618	SRSF6	94	80.000	Myotis_lucifugus
ENSCCAG00000026018	-	100	100.000	ENSNGAG00000017560	Srsf6	100	100.000	Nannospalax_galili
ENSCCAG00000026018	-	56	89.474	ENSNBRG00000014709	-	58	83.696	Neolamprologus_brichardi
ENSCCAG00000026018	-	58	93.590	ENSNBRG00000001846	-	52	87.634	Neolamprologus_brichardi
ENSCCAG00000026018	-	100	100.000	ENSNLEG00000006524	SRSF6	100	100.000	Nomascus_leucogenys
ENSCCAG00000026018	-	58	97.436	ENSMEUG00000014615	SRSF6	100	92.484	Notamacropus_eugenii
ENSCCAG00000026018	-	75	96.538	ENSOPRG00000002017	-	100	96.538	Ochotona_princeps
ENSCCAG00000026018	-	100	100.000	ENSODEG00000016510	-	100	100.000	Octodon_degus
ENSCCAG00000026018	-	61	86.585	ENSONIG00000020247	-	53	84.239	Oreochromis_niloticus
ENSCCAG00000026018	-	83	80.392	ENSOCUG00000009785	-	98	83.784	Oryctolagus_cuniculus
ENSCCAG00000026018	-	74	58.268	ENSOCUG00000023999	-	70	63.687	Oryctolagus_cuniculus
ENSCCAG00000026018	-	58	94.872	ENSORLG00020017506	srsf6a	90	70.323	Oryzias_latipes_hni
ENSCCAG00000026018	-	100	95.954	ENSOGAG00000014468	SRSF6	100	95.954	Otolemur_garnettii
ENSCCAG00000026018	-	93	93.168	ENSOARG00000003117	SRSF6	94	92.923	Ovis_aries
ENSCCAG00000026018	-	100	99.128	ENSPPAG00000034327	-	100	99.128	Pan_paniscus
ENSCCAG00000026018	-	90	85.437	ENSPPAG00000043131	-	100	87.702	Pan_paniscus
ENSCCAG00000026018	-	100	96.821	ENSPPRG00000008917	SRSF6	100	96.821	Panthera_pardus
ENSCCAG00000026018	-	56	95.897	ENSPTIG00000019153	SRSF6	91	95.408	Panthera_tigris_altaica
ENSCCAG00000026018	-	100	100.000	ENSPTRG00000044686	-	100	100.000	Pan_troglodytes
ENSCCAG00000026018	-	90	85.437	ENSPTRG00000046274	-	100	87.702	Pan_troglodytes
ENSCCAG00000026018	-	100	100.000	ENSPANG00000035224	SRSF6	100	100.000	Papio_anubis
ENSCCAG00000026018	-	59	77.500	ENSPKIG00000015703	-	95	61.745	Paramormyrops_kingsleyae
ENSCCAG00000026018	-	58	93.590	ENSPKIG00000015603	-	88	84.252	Paramormyrops_kingsleyae
ENSCCAG00000026018	-	100	66.952	ENSPKIG00000018463	-	83	89.286	Paramormyrops_kingsleyae
ENSCCAG00000026018	-	89	71.845	ENSPMGG00000014963	srsf6a	55	89.130	Periophthalmus_magnuspinnatus
ENSCCAG00000026018	-	85	87.931	ENSPEMG00000022405	-	96	87.931	Peromyscus_maniculatus_bairdii
ENSCCAG00000026018	-	100	98.519	ENSPCIG00000003820	SRSF6	100	98.519	Phascolarctos_cinereus
ENSCCAG00000026018	-	58	92.308	ENSPFOG00000006437	srsf6a	50	83.158	Poecilia_formosa
ENSCCAG00000026018	-	58	92.308	ENSPLAG00000009243	srsf6a	80	82.677	Poecilia_latipinna
ENSCCAG00000026018	-	58	92.308	ENSPMEG00000006042	SRSF6	54	87.027	Poecilia_mexicana
ENSCCAG00000026018	-	59	91.139	ENSPREG00000001040	srsf6a	87	83.846	Poecilia_reticulata
ENSCCAG00000026018	-	100	99.419	ENSPPYG00000011019	SRSF6	100	99.419	Pongo_abelii
ENSCCAG00000026018	-	58	98.718	ENSPCAG00000010954	SRSF6	96	93.189	Procavia_capensis
ENSCCAG00000026018	-	100	100.000	ENSPCOG00000026364	SRSF6	100	100.000	Propithecus_coquereli
ENSCCAG00000026018	-	94	95.652	ENSPVAG00000015232	SRSF6	94	95.356	Pteropus_vampyrus
ENSCCAG00000026018	-	58	93.590	ENSPNYG00000011272	-	51	87.634	Pundamilia_nyererei
ENSCCAG00000026018	-	56	89.474	ENSPNYG00000004944	-	58	83.696	Pundamilia_nyererei
ENSCCAG00000026018	-	59	95.000	ENSPNAG00000023179	-	94	84.252	Pygocentrus_nattereri
ENSCCAG00000026018	-	94	97.205	ENSRNOG00000006380	Srsf6	95	96.904	Rattus_norvegicus
ENSCCAG00000026018	-	100	97.093	ENSRBIG00000041414	SRSF6	100	97.093	Rhinopithecus_bieti
ENSCCAG00000026018	-	100	100.000	ENSRROG00000029989	SRSF6	100	100.000	Rhinopithecus_roxellana
ENSCCAG00000026018	-	100	100.000	ENSSBOG00000033708	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSCCAG00000026018	-	94	87.346	ENSSHAG00000012805	SRSF6	95	90.798	Sarcophilus_harrisii
ENSCCAG00000026018	-	89	64.095	ENSSFOG00015019681	-	53	81.959	Scleropages_formosus
ENSCCAG00000026018	-	55	93.243	ENSSFOG00015015169	SRSF6	60	89.130	Scleropages_formosus
ENSCCAG00000026018	-	56	88.158	ENSSMAG00000017447	-	55	79.891	Scophthalmus_maximus
ENSCCAG00000026018	-	59	92.500	ENSSMAG00000014861	-	94	68.504	Scophthalmus_maximus
ENSCCAG00000026018	-	98	61.151	ENSSDUG00000016097	srsf6a	53	87.634	Seriola_dumerili
ENSCCAG00000026018	-	63	87.059	ENSSDUG00000011036	-	90	87.059	Seriola_dumerili
ENSCCAG00000026018	-	98	61.871	ENSSLDG00000022841	srsf6a	54	87.634	Seriola_lalandi_dorsalis
ENSCCAG00000026018	-	63	87.059	ENSSLDG00000014858	-	90	87.059	Seriola_lalandi_dorsalis
ENSCCAG00000026018	-	75	95.385	ENSSARG00000001602	SRSF6	100	95.385	Sorex_araneus
ENSCCAG00000026018	-	100	97.037	ENSSPUG00000004967	SRSF6	100	97.037	Sphenodon_punctatus
ENSCCAG00000026018	-	63	84.706	ENSSPAG00000021913	-	86	84.706	Stegastes_partitus
ENSCCAG00000026018	-	98	61.871	ENSSPAG00000002362	srsf6a	67	85.714	Stegastes_partitus
ENSCCAG00000026018	-	100	96.243	ENSSSCG00000007362	SRSF6	100	96.243	Sus_scrofa
ENSCCAG00000026018	-	92	84.520	ENSTGUG00000003455	SRSF6	94	85.061	Taeniopygia_guttata
ENSCCAG00000026018	-	59	92.500	ENSTRUG00000021397	-	87	92.500	Takifugu_rubripes
ENSCCAG00000026018	-	89	70.358	ENSTNIG00000001692	srsf6a	57	86.022	Tetraodon_nigroviridis
ENSCCAG00000026018	-	84	93.793	ENSTBEG00000013448	SRSF6	93	93.793	Tupaia_belangeri
ENSCCAG00000026018	-	68	96.170	ENSTTRG00000015410	SRSF6	89	95.652	Tursiops_truncatus
ENSCCAG00000026018	-	100	99.259	ENSUAMG00000003559	SRSF6	100	99.259	Ursus_americanus
ENSCCAG00000026018	-	56	95.897	ENSUMAG00000001154	SRSF6	91	95.408	Ursus_maritimus
ENSCCAG00000026018	-	75	100.000	ENSVPAG00000003016	SRSF6	74	100.000	Vicugna_pacos
ENSCCAG00000026018	-	100	78.519	ENSVVUG00000019276	-	100	78.519	Vulpes_vulpes
ENSCCAG00000026018	-	58	92.308	ENSXMAG00000021849	srsf6a	55	86.413	Xiphophorus_maculatus