EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000026083 (Gene tree)
Gene ID: 108309720
Gene Symbol: R3HDM2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 59367 bases
Position: chrKV389522.1:3250362-3309728
Accession: 108309720
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000016665	R3H	PF01424.22	3.1e-10	1	1
ENSCCAP00000016683	R3H	PF01424.22	3.1e-10	1	1
ENSCCAP00000016676	R3H	PF01424.22	3.2e-10	1	1
ENSCCAP00000016660	R3H	PF01424.22	3.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000034112	R3HDM2-201	3296	XM_017536179	ENSCCAP00000016660	925 (aa)	XP_017391668	A0A2K5QLE0
ENSCCAT00000034135	R3HDM2-204	2553	XM_017536182	ENSCCAP00000016683	851 (aa)	XP_017391671	A0A2K5QLA9
ENSCCAT00000034128	R3HDM2-203	2625	-	ENSCCAP00000016676	875 (aa)	-	A0A2K5QLA8
ENSCCAT00000034117	R3HDM2-202	3193	XM_017536189	ENSCCAP00000016665	891 (aa)	XP_017391678	A0A2K5QLE4

Gene Model

Click here to download ENSCCAG00000026083's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000026083's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000026083	R3HDM2	69	53.425	ENSCCAG00000032940	ARPP21	93	45.455
ENSCCAG00000026083	R3HDM2	94	57.178	ENSCCAG00000027199	R3HDM1	89	47.285

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000026083	R3HDM2	100	99.202	ENSG00000179912	R3HDM2	100	99.286	Homo_sapiens
ENSCCAG00000026083	R3HDM2	99	67.853	ENSAPOG00000020341	r3hdm2	86	67.817	Acanthochromis_polyacanthus
ENSCCAG00000026083	R3HDM2	68	36.210	ENSAPOG00000021873	-	79	34.251	Acanthochromis_polyacanthus
ENSCCAG00000026083	R3HDM2	100	91.318	ENSAMEG00000004812	R3HDM2	89	93.140	Ailuropoda_melanoleuca
ENSCCAG00000026083	R3HDM2	91	68.875	ENSACIG00000016146	r3hdm2	86	68.284	Amphilophus_citrinellus
ENSCCAG00000026083	R3HDM2	99	65.649	ENSAOCG00000023694	r3hdm2	87	66.376	Amphiprion_ocellaris
ENSCCAG00000026083	R3HDM2	70	35.901	ENSAOCG00000003840	-	93	33.426	Amphiprion_ocellaris
ENSCCAG00000026083	R3HDM2	99	67.742	ENSAPEG00000008851	r3hdm2	88	69.174	Amphiprion_percula
ENSCCAG00000026083	R3HDM2	69	36.405	ENSAPEG00000014325	-	78	35.315	Amphiprion_percula
ENSCCAG00000026083	R3HDM2	99	66.149	ENSATEG00000025024	r3hdm2	88	69.405	Anabas_testudineus
ENSCCAG00000026083	R3HDM2	100	80.994	ENSACAG00000006388	R3HDM2	89	81.105	Anolis_carolinensis
ENSCCAG00000026083	R3HDM2	98	95.322	ENSANAG00000031310	-	88	95.322	Aotus_nancymaae
ENSCCAG00000026083	R3HDM2	100	99.658	ENSANAG00000025397	-	89	99.665	Aotus_nancymaae
ENSCCAG00000026083	R3HDM2	99	65.389	ENSACLG00000019106	r3hdm2	87	66.194	Astatotilapia_calliptera
ENSCCAG00000026083	R3HDM2	89	62.469	ENSAMXG00000017180	r3hdm2	88	65.423	Astyanax_mexicanus
ENSCCAG00000026083	R3HDM2	100	97.374	ENSBTAG00000018361	R3HDM2	89	97.374	Bos_taurus
ENSCCAG00000026083	R3HDM2	100	99.314	ENSCJAG00000007365	R3HDM2	89	99.330	Callithrix_jacchus
ENSCCAG00000026083	R3HDM2	100	96.595	ENSCAFG00000000215	R3HDM2	89	96.882	Canis_familiaris
ENSCCAG00000026083	R3HDM2	100	96.583	ENSCAFG00020023713	R3HDM2	89	96.583	Canis_lupus_dingo
ENSCCAG00000026083	R3HDM2	100	96.918	ENSCHIG00000014022	R3HDM2	89	96.918	Capra_hircus
ENSCCAG00000026083	R3HDM2	100	96.032	ENSTSYG00000001449	R3HDM2	89	96.214	Carlito_syrichta
ENSCCAG00000026083	R3HDM2	100	94.400	ENSCPOG00000009217	R3HDM2	89	94.400	Cavia_porcellus
ENSCCAG00000026083	R3HDM2	100	99.202	ENSCATG00000036929	R3HDM2	89	99.220	Cercocebus_atys
ENSCCAG00000026083	R3HDM2	100	95.000	ENSCLAG00000011997	R3HDM2	89	95.000	Chinchilla_lanigera
ENSCCAG00000026083	R3HDM2	100	95.191	ENSCSAG00000004911	R3HDM2	89	95.191	Chlorocebus_sabaeus
ENSCCAG00000026083	R3HDM2	84	92.123	ENSCHOG00000005636	R3HDM2	91	92.123	Choloepus_hoffmanni
ENSCCAG00000026083	R3HDM2	100	78.284	ENSCPBG00000013922	R3HDM2	89	79.870	Chrysemys_picta_bellii
ENSCCAG00000026083	R3HDM2	100	99.543	ENSCANG00000043807	R3HDM2	89	99.543	Colobus_angolensis_palliatus
ENSCCAG00000026083	R3HDM2	100	93.977	ENSCGRG00001017324	R3hdm2	89	93.977	Cricetulus_griseus_chok1gshd
ENSCCAG00000026083	R3HDM2	100	91.079	ENSCGRG00000003862	R3hdm2	88	93.995	Cricetulus_griseus_crigri
ENSCCAG00000026083	R3HDM2	95	66.215	ENSCSEG00000010925	r3hdm2	90	65.628	Cynoglossus_semilaevis
ENSCCAG00000026083	R3HDM2	99	63.046	ENSCVAG00000009058	r3hdm2	86	67.730	Cyprinodon_variegatus
ENSCCAG00000026083	R3HDM2	92	64.501	ENSDARG00000102610	r3hdm2	87	65.818	Danio_rerio
ENSCCAG00000026083	R3HDM2	100	92.500	ENSDNOG00000015033	R3HDM2	87	96.000	Dasypus_novemcinctus
ENSCCAG00000026083	R3HDM2	94	93.750	ENSDORG00000011462	R3hdm2	87	96.894	Dipodomys_ordii
ENSCCAG00000026083	R3HDM2	100	96.701	ENSEASG00005007091	R3HDM2	89	96.701	Equus_asinus_asinus
ENSCCAG00000026083	R3HDM2	100	97.371	ENSECAG00000003157	R3HDM2	90	97.371	Equus_caballus
ENSCCAG00000026083	R3HDM2	95	66.210	ENSELUG00000015969	r3hdm2	88	66.553	Esox_lucius
ENSCCAG00000026083	R3HDM2	100	96.604	ENSFCAG00000000192	R3HDM2	88	96.604	Felis_catus
ENSCCAG00000026083	R3HDM2	99	82.143	ENSFALG00000000255	R3HDM2	100	72.717	Ficedula_albicollis
ENSCCAG00000026083	R3HDM2	100	93.424	ENSFDAG00000019385	R3HDM2	89	94.678	Fukomys_damarensis
ENSCCAG00000026083	R3HDM2	66	33.638	ENSFHEG00000007936	-	76	35.818	Fundulus_heteroclitus
ENSCCAG00000026083	R3HDM2	99	63.626	ENSFHEG00000016484	r3hdm2	87	65.237	Fundulus_heteroclitus
ENSCCAG00000026083	R3HDM2	94	62.417	ENSGMOG00000007961	r3hdm2	89	61.615	Gadus_morhua
ENSCCAG00000026083	R3HDM2	100	77.054	ENSGALG00000043736	R3HDM2	89	77.375	Gallus_gallus
ENSCCAG00000026083	R3HDM2	99	63.462	ENSGAFG00000013887	r3hdm2	86	67.405	Gambusia_affinis
ENSCCAG00000026083	R3HDM2	68	34.969	ENSGAFG00000015558	-	91	32.993	Gambusia_affinis
ENSCCAG00000026083	R3HDM2	94	63.606	ENSGACG00000006442	r3hdm2	89	66.149	Gasterosteus_aculeatus
ENSCCAG00000026083	R3HDM2	100	80.310	ENSGAGG00000017797	R3HDM2	89	80.310	Gopherus_agassizii
ENSCCAG00000026083	R3HDM2	100	98.974	ENSGGOG00000015007	R3HDM2	89	98.997	Gorilla_gorilla
ENSCCAG00000026083	R3HDM2	55	35.377	ENSHBUG00000018525	-	77	34.622	Haplochromis_burtoni
ENSCCAG00000026083	R3HDM2	87	87.240	ENSHGLG00000010421	-	84	87.240	Heterocephalus_glaber_female
ENSCCAG00000026083	R3HDM2	97	94.772	ENSHGLG00000010434	-	89	94.772	Heterocephalus_glaber_female
ENSCCAG00000026083	R3HDM2	100	94.767	ENSHGLG00100004183	-	89	94.772	Heterocephalus_glaber_male
ENSCCAG00000026083	R3HDM2	98	83.082	ENSHGLG00100018871	-	90	83.082	Heterocephalus_glaber_male
ENSCCAG00000026083	R3HDM2	99	65.056	ENSHCOG00000001142	r3hdm2	85	65.471	Hippocampus_comes
ENSCCAG00000026083	R3HDM2	97	73.966	ENSIPUG00000023873	r3hdm2	92	63.547	Ictalurus_punctatus
ENSCCAG00000026083	R3HDM2	100	91.024	ENSSTOG00000013424	R3HDM2	88	95.035	Ictidomys_tridecemlineatus
ENSCCAG00000026083	R3HDM2	97	95.764	ENSJJAG00000010001	R3hdm2	89	95.875	Jaculus_jaculus
ENSCCAG00000026083	R3HDM2	72	31.514	ENSKMAG00000004052	-	93	31.564	Kryptolebias_marmoratus
ENSCCAG00000026083	R3HDM2	92	70.452	ENSKMAG00000012695	r3hdm2	85	69.927	Kryptolebias_marmoratus
ENSCCAG00000026083	R3HDM2	95	66.743	ENSLBEG00000013115	r3hdm2	84	64.783	Labrus_bergylta
ENSCCAG00000026083	R3HDM2	94	68.451	ENSLACG00000019064	r3hdm2	88	69.932	Latimeria_chalumnae
ENSCCAG00000026083	R3HDM2	100	71.018	ENSLOCG00000005976	r3hdm2	90	70.815	Lepisosteus_oculatus
ENSCCAG00000026083	R3HDM2	100	89.366	ENSLAFG00000006510	R3HDM2	89	91.407	Loxodonta_africana
ENSCCAG00000026083	R3HDM2	100	99.203	ENSMFAG00000036385	R3HDM2	89	99.203	Macaca_fascicularis
ENSCCAG00000026083	R3HDM2	100	99.203	ENSMMUG00000021789	R3HDM2	89	99.203	Macaca_mulatta
ENSCCAG00000026083	R3HDM2	100	99.090	ENSMNEG00000025314	R3HDM2	89	99.110	Macaca_nemestrina
ENSCCAG00000026083	R3HDM2	100	99.316	ENSMLEG00000028915	R3HDM2	89	99.331	Mandrillus_leucophaeus
ENSCCAG00000026083	R3HDM2	99	64.425	ENSMAMG00000009793	r3hdm2	87	64.579	Mastacembelus_armatus
ENSCCAG00000026083	R3HDM2	99	65.389	ENSMZEG00005007319	r3hdm2	87	66.194	Maylandia_zebra
ENSCCAG00000026083	R3HDM2	100	97.279	ENSMICG00000012389	R3HDM2	89	97.279	Microcebus_murinus
ENSCCAG00000026083	R3HDM2	100	94.191	ENSMOCG00000014425	R3hdm2	89	94.209	Microtus_ochrogaster
ENSCCAG00000026083	R3HDM2	94	66.506	ENSMMOG00000007448	r3hdm2	87	68.873	Mola_mola
ENSCCAG00000026083	R3HDM2	81	77.532	ENSMALG00000010211	r3hdm2	85	65.423	Monopterus_albus
ENSCCAG00000026083	R3HDM2	100	94.545	MGP_CAROLIEiJ_G0015896	R3hdm2	89	94.778	Mus_caroli
ENSCCAG00000026083	R3HDM2	100	94.881	ENSMUSG00000025404	R3hdm2	89	95.106	Mus_musculus
ENSCCAG00000026083	R3HDM2	100	94.064	MGP_PahariEiJ_G0031189	R3hdm2	89	95.424	Mus_pahari
ENSCCAG00000026083	R3HDM2	100	94.438	MGP_SPRETEiJ_G0016722	R3hdm2	89	94.673	Mus_spretus
ENSCCAG00000026083	R3HDM2	100	88.486	ENSMPUG00000001818	R3HDM2	88	91.578	Mustela_putorius_furo
ENSCCAG00000026083	R3HDM2	100	91.173	ENSMLUG00000004980	R3HDM2	89	93.219	Myotis_lucifugus
ENSCCAG00000026083	R3HDM2	100	96.800	ENSNGAG00000018800	R3hdm2	89	96.872	Nannospalax_galili
ENSCCAG00000026083	R3HDM2	92	68.193	ENSNBRG00000004483	r3hdm2	88	68.350	Neolamprologus_brichardi
ENSCCAG00000026083	R3HDM2	100	99.087	ENSNLEG00000017351	R3HDM2	89	99.107	Nomascus_leucogenys
ENSCCAG00000026083	R3HDM2	97	81.063	ENSMEUG00000008588	R3HDM2	87	80.842	Notamacropus_eugenii
ENSCCAG00000026083	R3HDM2	100	85.665	ENSOPRG00000013670	R3HDM2	89	88.426	Ochotona_princeps
ENSCCAG00000026083	R3HDM2	99	67.336	ENSONIG00000005075	r3hdm2	88	67.592	Oreochromis_niloticus
ENSCCAG00000026083	R3HDM2	100	90.588	ENSOCUG00000013258	R3HDM2	89	92.834	Oryctolagus_cuniculus
ENSCCAG00000026083	R3HDM2	99	65.483	ENSORLG00000005502	r3hdm2	88	62.800	Oryzias_latipes
ENSCCAG00000026083	R3HDM2	99	63.656	ENSORLG00020017069	r3hdm2	87	64.355	Oryzias_latipes_hni
ENSCCAG00000026083	R3HDM2	99	63.765	ENSORLG00015012735	r3hdm2	89	62.670	Oryzias_latipes_hsok
ENSCCAG00000026083	R3HDM2	98	62.184	ENSOMEG00000018079	r3hdm2	88	63.512	Oryzias_melastigma
ENSCCAG00000026083	R3HDM2	100	83.713	ENSOGAG00000027966	-	92	83.314	Otolemur_garnettii
ENSCCAG00000026083	R3HDM2	97	96.774	ENSOGAG00000012055	R3HDM2	89	96.774	Otolemur_garnettii
ENSCCAG00000026083	R3HDM2	100	96.697	ENSOARG00000006929	R3HDM2	89	96.697	Ovis_aries
ENSCCAG00000026083	R3HDM2	100	99.202	ENSPPAG00000034395	R3HDM2	89	99.220	Pan_paniscus
ENSCCAG00000026083	R3HDM2	100	96.925	ENSPPRG00000009240	R3HDM2	89	96.925	Panthera_pardus
ENSCCAG00000026083	R3HDM2	100	96.925	ENSPTIG00000008752	R3HDM2	89	96.925	Panthera_tigris_altaica
ENSCCAG00000026083	R3HDM2	100	99.089	ENSPTRG00000046457	R3HDM2	89	99.089	Pan_troglodytes
ENSCCAG00000026083	R3HDM2	98	97.905	ENSPANG00000024002	R3HDM2	89	97.952	Papio_anubis
ENSCCAG00000026083	R3HDM2	99	64.516	ENSPKIG00000003171	r3hdm2	89	64.865	Paramormyrops_kingsleyae
ENSCCAG00000026083	R3HDM2	71	73.228	ENSPSIG00000006954	R3HDM2	100	73.734	Pelodiscus_sinensis
ENSCCAG00000026083	R3HDM2	92	70.416	ENSPMGG00000007061	r3hdm2	87	69.890	Periophthalmus_magnuspinnatus
ENSCCAG00000026083	R3HDM2	100	93.957	ENSPEMG00000015964	R3hdm2	89	93.957	Peromyscus_maniculatus_bairdii
ENSCCAG00000026083	R3HDM2	100	91.344	ENSPCIG00000023841	R3HDM2	90	91.116	Phascolarctos_cinereus
ENSCCAG00000026083	R3HDM2	93	71.579	ENSPFOG00000006077	r3hdm2	83	73.421	Poecilia_formosa
ENSCCAG00000026083	R3HDM2	99	65.854	ENSPLAG00000002971	r3hdm2	86	67.282	Poecilia_latipinna
ENSCCAG00000026083	R3HDM2	66	32.879	ENSPMEG00000014457	-	72	36.289	Poecilia_mexicana
ENSCCAG00000026083	R3HDM2	99	65.854	ENSPMEG00000005330	r3hdm2	86	67.282	Poecilia_mexicana
ENSCCAG00000026083	R3HDM2	99	65.854	ENSPREG00000008424	r3hdm2	87	65.380	Poecilia_reticulata
ENSCCAG00000026083	R3HDM2	100	92.343	ENSPPYG00000004685	R3HDM2	73	95.271	Pongo_abelii
ENSCCAG00000026083	R3HDM2	86	93.750	ENSPCAG00000014642	R3HDM2	80	95.455	Procavia_capensis
ENSCCAG00000026083	R3HDM2	100	97.494	ENSPCOG00000013201	R3HDM2	89	97.494	Propithecus_coquereli
ENSCCAG00000026083	R3HDM2	100	91.802	ENSPVAG00000003967	R3HDM2	89	93.743	Pteropus_vampyrus
ENSCCAG00000026083	R3HDM2	93	65.914	ENSPNYG00000013479	r3hdm2	88	66.076	Pundamilia_nyererei
ENSCCAG00000026083	R3HDM2	99	61.332	ENSPNAG00000017473	r3hdm2	88	62.607	Pygocentrus_nattereri
ENSCCAG00000026083	R3HDM2	100	93.750	ENSRNOG00000007801	R3hdm2	89	93.750	Rattus_norvegicus
ENSCCAG00000026083	R3HDM2	100	96.347	ENSRBIG00000037403	R3HDM2	89	96.429	Rhinopithecus_bieti
ENSCCAG00000026083	R3HDM2	100	99.315	ENSRROG00000022271	R3HDM2	89	99.330	Rhinopithecus_roxellana
ENSCCAG00000026083	R3HDM2	100	99.886	ENSSBOG00000023547	R3HDM2	89	99.888	Saimiri_boliviensis_boliviensis
ENSCCAG00000026083	R3HDM2	100	92.027	ENSSHAG00000003511	R3HDM2	99	91.800	Sarcophilus_harrisii
ENSCCAG00000026083	R3HDM2	93	71.014	ENSSFOG00015011219	r3hdm2	88	69.240	Scleropages_formosus
ENSCCAG00000026083	R3HDM2	99	65.111	ENSSMAG00000012073	r3hdm2	86	69.773	Scophthalmus_maximus
ENSCCAG00000026083	R3HDM2	99	67.220	ENSSDUG00000019269	r3hdm2	88	67.857	Seriola_dumerili
ENSCCAG00000026083	R3HDM2	99	65.397	ENSSLDG00000005252	r3hdm2	88	68.395	Seriola_lalandi_dorsalis
ENSCCAG00000026083	R3HDM2	92	89.744	ENSSARG00000003958	R3HDM2	82	89.744	Sorex_araneus
ENSCCAG00000026083	R3HDM2	98	79.821	ENSSPUG00000014132	R3HDM2	88	79.821	Sphenodon_punctatus
ENSCCAG00000026083	R3HDM2	99	67.706	ENSSPAG00000022594	r3hdm2	87	69.937	Stegastes_partitus
ENSCCAG00000026083	R3HDM2	70	34.904	ENSSPAG00000016856	-	76	37.071	Stegastes_partitus
ENSCCAG00000026083	R3HDM2	100	97.943	ENSSSCG00000026498	R3HDM2	89	97.943	Sus_scrofa
ENSCCAG00000026083	R3HDM2	81	76.147	ENSTGUG00000015881	R3HDM2	100	76.271	Taeniopygia_guttata
ENSCCAG00000026083	R3HDM2	93	66.626	ENSTRUG00000015075	r3hdm2	86	67.931	Takifugu_rubripes
ENSCCAG00000026083	R3HDM2	89	77.364	ENSTNIG00000007057	r3hdm2	75	79.083	Tetraodon_nigroviridis
ENSCCAG00000026083	R3HDM2	78	96.386	ENSTBEG00000015967	R3HDM2	69	96.386	Tupaia_belangeri
ENSCCAG00000026083	R3HDM2	96	84.322	ENSTTRG00000013082	R3HDM2	89	78.209	Tursiops_truncatus
ENSCCAG00000026083	R3HDM2	100	97.039	ENSUAMG00000020913	R3HDM2	89	93.421	Ursus_americanus
ENSCCAG00000026083	R3HDM2	100	90.877	ENSUMAG00000019179	R3HDM2	88	91.364	Ursus_maritimus
ENSCCAG00000026083	R3HDM2	100	84.715	ENSVPAG00000008656	R3HDM2	89	86.652	Vicugna_pacos
ENSCCAG00000026083	R3HDM2	100	97.153	ENSVVUG00000018014	R3HDM2	87	97.153	Vulpes_vulpes
ENSCCAG00000026083	R3HDM2	100	73.804	ENSXETG00000017153	r3hdm2	88	72.955	Xenopus_tropicalis
ENSCCAG00000026083	R3HDM2	83	67.121	ENSXCOG00000013882	r3hdm2	85	67.073	Xiphophorus_couchianus
ENSCCAG00000026083	R3HDM2	99	63.814	ENSXMAG00000017978	r3hdm2	85	67.344	Xiphophorus_maculatus
ENSCCAG00000026083	R3HDM2	68	34.394	ENSXMAG00000002994	-	91	32.847	Xiphophorus_maculatus