EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000026371 (Gene tree)
Gene ID: -
Gene Symbol: TSN
Alias: BCLF-1|REHF-1|TRSLN
Full Name: translin
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 11108 bases
Position: chrKV389593.1:5047753-5058860
Accession: 12379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000017265	Translin	PF01997.16	8.7e-55	1	1
ENSCCAP00000017262	Translin	PF01997.16	3e-53	1	1
ENSCCAP00000017266	Translin	PF01997.16	4.4e-53	1	1
ENSCCAP00000017269	Translin	PF01997.16	3.9e-19	1	1
ENSCCAP00000017200	Translin	PF01997.16	7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000034729	TSN-205	447	-	ENSCCAP00000017269	148 (aa)	-	A0A2K5QMZ7
ENSCCAT00000034722	TSN-202	654	-	ENSCCAP00000017262	217 (aa)	-	A0A2K5QMY4
ENSCCAT00000034659	TSN-201	360	-	ENSCCAP00000017200	119 (aa)	-	A0A2K5QMZ1
ENSCCAT00000034726	TSN-204	672	-	ENSCCAP00000017266	223 (aa)	-	A0A2K5QMZ5
ENSCCAT00000034725	TSN-203	687	-	ENSCCAP00000017265	228 (aa)	-	A0A2K5QN57

Gene Model

Click here to download ENSCCAG00000026371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000026371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000026371	TSN	97	77.778	ENSCCAG00000034886	-	84	84.868
ENSCCAG00000026371	TSN	97	70.690	ENSCCAG00000032055	-	100	76.522

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000026371	TSN	100	99.324	ENSG00000211460	TSN	100	99.324	Homo_sapiens
ENSCCAG00000026371	TSN	100	78.070	ENSAPOG00000002063	tsn	100	78.070	Acanthochromis_polyacanthus
ENSCCAG00000026371	TSN	100	98.684	ENSAMEG00000005055	TSN	100	98.684	Ailuropoda_melanoleuca
ENSCCAG00000026371	TSN	100	78.947	ENSACIG00000021694	tsn	100	78.947	Amphilophus_citrinellus
ENSCCAG00000026371	TSN	100	78.070	ENSAOCG00000015574	tsn	100	79.612	Amphiprion_ocellaris
ENSCCAG00000026371	TSN	100	78.070	ENSAPEG00000001677	tsn	100	78.070	Amphiprion_percula
ENSCCAG00000026371	TSN	99	76.889	ENSATEG00000004115	tsn	99	76.889	Anabas_testudineus
ENSCCAG00000026371	TSN	94	84.475	ENSACAG00000004757	TSN	99	84.475	Anolis_carolinensis
ENSCCAG00000026371	TSN	100	99.561	ENSANAG00000026842	TSN	100	99.561	Aotus_nancymaae
ENSCCAG00000026371	TSN	100	78.947	ENSACLG00000020831	tsn	100	78.947	Astatotilapia_calliptera
ENSCCAG00000026371	TSN	100	77.193	ENSAMXG00000035417	tsn	100	77.193	Astyanax_mexicanus
ENSCCAG00000026371	TSN	100	98.684	ENSBTAG00000006059	TSN	100	98.684	Bos_taurus
ENSCCAG00000026371	TSN	100	99.561	ENSCJAG00000047222	-	100	99.561	Callithrix_jacchus
ENSCCAG00000026371	TSN	99	83.898	ENSCJAG00000008511	-	88	90.265	Callithrix_jacchus
ENSCCAG00000026371	TSN	100	99.123	ENSCJAG00000044533	-	100	99.123	Callithrix_jacchus
ENSCCAG00000026371	TSN	99	98.678	ENSCAFG00000004700	TSN	94	98.678	Canis_familiaris
ENSCCAG00000026371	TSN	100	98.684	ENSCAFG00020011747	TSN	100	98.684	Canis_lupus_dingo
ENSCCAG00000026371	TSN	100	98.684	ENSCHIG00000010715	TSN	100	98.684	Capra_hircus
ENSCCAG00000026371	TSN	100	98.246	ENSTSYG00000004395	TSN	100	98.246	Carlito_syrichta
ENSCCAG00000026371	TSN	95	80.097	ENSCAPG00000015595	TSN	81	80.097	Cavia_aperea
ENSCCAG00000026371	TSN	100	99.123	ENSCPOG00000035645	TSN	100	99.123	Cavia_porcellus
ENSCCAG00000026371	TSN	100	99.123	ENSCATG00000032155	TSN	100	99.123	Cercocebus_atys
ENSCCAG00000026371	TSN	100	99.123	ENSCLAG00000006171	TSN	100	99.123	Chinchilla_lanigera
ENSCCAG00000026371	TSN	100	99.123	ENSCSAG00000016712	TSN	100	99.123	Chlorocebus_sabaeus
ENSCCAG00000026371	TSN	97	82.759	ENSCPBG00000013741	-	80	87.417	Chrysemys_picta_bellii
ENSCCAG00000026371	TSN	97	76.126	ENSCPBG00000018116	-	97	76.126	Chrysemys_picta_bellii
ENSCCAG00000026371	TSN	95	44.700	ENSCING00000012612	-	99	44.700	Ciona_intestinalis
ENSCCAG00000026371	TSN	97	43.049	ENSCSAVG00000009485	-	99	43.049	Ciona_savignyi
ENSCCAG00000026371	TSN	100	99.123	ENSCANG00000041881	TSN	100	99.123	Colobus_angolensis_palliatus
ENSCCAG00000026371	TSN	100	99.123	ENSCGRG00001018233	Tsn	100	99.123	Cricetulus_griseus_chok1gshd
ENSCCAG00000026371	TSN	100	99.123	ENSCGRG00000008331	Tsn	100	99.123	Cricetulus_griseus_crigri
ENSCCAG00000026371	TSN	100	75.439	ENSCSEG00000005825	tsn	100	75.439	Cynoglossus_semilaevis
ENSCCAG00000026371	TSN	98	70.536	ENSCVAG00000022024	tsn	99	70.982	Cyprinodon_variegatus
ENSCCAG00000026371	TSN	98	79.018	ENSDARG00000041830	tsn	99	79.018	Danio_rerio
ENSCCAG00000026371	TSN	100	98.246	ENSDNOG00000025740	TSN	100	98.246	Dasypus_novemcinctus
ENSCCAG00000026371	TSN	100	99.123	ENSDORG00000026251	-	100	99.123	Dipodomys_ordii
ENSCCAG00000026371	TSN	95	52.315	FBgn0033528	trsn	91	52.315	Drosophila_melanogaster
ENSCCAG00000026371	TSN	100	98.684	ENSEASG00005004774	TSN	100	98.684	Equus_asinus_asinus
ENSCCAG00000026371	TSN	100	98.684	ENSECAG00000015930	TSN	100	98.684	Equus_caballus
ENSCCAG00000026371	TSN	80	97.701	ENSEEUG00000013935	TSN	100	97.701	Erinaceus_europaeus
ENSCCAG00000026371	TSN	100	78.947	ENSELUG00000007669	tsn	100	78.947	Esox_lucius
ENSCCAG00000026371	TSN	100	98.684	ENSFCAG00000027149	TSN	100	98.684	Felis_catus
ENSCCAG00000026371	TSN	78	74.118	ENSFCAG00000022306	-	96	74.118	Felis_catus
ENSCCAG00000026371	TSN	95	86.058	ENSFALG00000013247	TSN	96	82.805	Ficedula_albicollis
ENSCCAG00000026371	TSN	100	99.123	ENSFDAG00000012302	TSN	100	99.123	Fukomys_damarensis
ENSCCAG00000026371	TSN	100	78.509	ENSFHEG00000015531	tsn	100	78.509	Fundulus_heteroclitus
ENSCCAG00000026371	TSN	98	76.786	ENSGMOG00000009247	tsn	99	76.786	Gadus_morhua
ENSCCAG00000026371	TSN	100	86.463	ENSGALG00000011652	TSN	100	86.463	Gallus_gallus
ENSCCAG00000026371	TSN	100	78.070	ENSGAFG00000003816	tsn	100	78.070	Gambusia_affinis
ENSCCAG00000026371	TSN	97	77.928	ENSGACG00000000235	tsn	97	77.928	Gasterosteus_aculeatus
ENSCCAG00000026371	TSN	100	99.324	ENSGGOG00000002216	TSN	100	99.324	Gorilla_gorilla
ENSCCAG00000026371	TSN	100	78.070	ENSHBUG00000002340	tsn	85	78.070	Haplochromis_burtoni
ENSCCAG00000026371	TSN	100	99.123	ENSHGLG00000007038	TSN	100	99.123	Heterocephalus_glaber_female
ENSCCAG00000026371	TSN	100	99.123	ENSHGLG00100000069	TSN	100	99.123	Heterocephalus_glaber_male
ENSCCAG00000026371	TSN	98	77.578	ENSHCOG00000001756	tsn	99	77.578	Hippocampus_comes
ENSCCAG00000026371	TSN	100	78.070	ENSIPUG00000021370	tsn	100	78.070	Ictalurus_punctatus
ENSCCAG00000026371	TSN	100	99.123	ENSSTOG00000000972	TSN	100	99.123	Ictidomys_tridecemlineatus
ENSCCAG00000026371	TSN	100	98.246	ENSJJAG00000006730	Tsn	100	98.246	Jaculus_jaculus
ENSCCAG00000026371	TSN	100	78.070	ENSKMAG00000004996	tsn	100	78.070	Kryptolebias_marmoratus
ENSCCAG00000026371	TSN	99	77.333	ENSLBEG00000012620	tsn	99	77.333	Labrus_bergylta
ENSCCAG00000026371	TSN	98	59.471	ENSLACG00000005246	TSN	99	59.471	Latimeria_chalumnae
ENSCCAG00000026371	TSN	99	78.667	ENSLOCG00000002191	tsn	98	78.667	Lepisosteus_oculatus
ENSCCAG00000026371	TSN	100	90.476	ENSLAFG00000032428	TSN	100	90.476	Loxodonta_africana
ENSCCAG00000026371	TSN	100	99.123	ENSMFAG00000044217	TSN	100	99.123	Macaca_fascicularis
ENSCCAG00000026371	TSN	100	99.123	ENSMMUG00000021119	TSN	100	99.123	Macaca_mulatta
ENSCCAG00000026371	TSN	100	99.123	ENSMNEG00000040632	TSN	100	99.123	Macaca_nemestrina
ENSCCAG00000026371	TSN	97	93.966	ENSMLEG00000038656	TSN	96	100.000	Mandrillus_leucophaeus
ENSCCAG00000026371	TSN	100	77.632	ENSMAMG00000019536	tsn	100	77.632	Mastacembelus_armatus
ENSCCAG00000026371	TSN	100	78.947	ENSMZEG00005018715	tsn	85	78.947	Maylandia_zebra
ENSCCAG00000026371	TSN	80	85.632	ENSMGAG00000011956	TSN	89	85.632	Meleagris_gallopavo
ENSCCAG00000026371	TSN	95	98.544	ENSMAUG00000018800	Tsn	100	98.544	Mesocricetus_auratus
ENSCCAG00000026371	TSN	100	99.123	ENSMICG00000015793	TSN	100	99.123	Microcebus_murinus
ENSCCAG00000026371	TSN	100	98.246	ENSMOCG00000013248	Tsn	100	98.246	Microtus_ochrogaster
ENSCCAG00000026371	TSN	95	77.184	ENSMMOG00000019661	tsn	100	77.184	Mola_mola
ENSCCAG00000026371	TSN	100	92.576	ENSMODG00000000147	TSN	100	92.576	Monodelphis_domestica
ENSCCAG00000026371	TSN	100	77.632	ENSMALG00000001827	tsn	100	77.632	Monopterus_albus
ENSCCAG00000026371	TSN	100	98.684	ENSMUSG00000026374	Tsn	100	98.684	Mus_musculus
ENSCCAG00000026371	TSN	100	98.684	MGP_PahariEiJ_G0027742	Tsn	100	98.684	Mus_pahari
ENSCCAG00000026371	TSN	100	98.684	MGP_SPRETEiJ_G0015313	Tsn	100	98.684	Mus_spretus
ENSCCAG00000026371	TSN	100	98.684	ENSMPUG00000001056	TSN	100	98.684	Mustela_putorius_furo
ENSCCAG00000026371	TSN	56	30.496	ENSMLUG00000028551	-	83	30.496	Myotis_lucifugus
ENSCCAG00000026371	TSN	95	98.058	ENSMLUG00000012656	TSN	100	98.058	Myotis_lucifugus
ENSCCAG00000026371	TSN	100	99.123	ENSNGAG00000010353	Tsn	100	99.123	Nannospalax_galili
ENSCCAG00000026371	TSN	100	78.509	ENSNBRG00000001193	tsn	100	78.509	Neolamprologus_brichardi
ENSCCAG00000026371	TSN	100	99.123	ENSNLEG00000032773	TSN	100	99.123	Nomascus_leucogenys
ENSCCAG00000026371	TSN	97	89.655	ENSMEUG00000006228	TSN	100	72.368	Notamacropus_eugenii
ENSCCAG00000026371	TSN	64	78.417	ENSOPRG00000004858	-	99	78.417	Ochotona_princeps
ENSCCAG00000026371	TSN	100	99.123	ENSODEG00000008386	-	100	99.123	Octodon_degus
ENSCCAG00000026371	TSN	100	79.825	ENSODEG00000005998	-	100	79.825	Octodon_degus
ENSCCAG00000026371	TSN	100	78.509	ENSONIG00000017060	tsn	100	78.509	Oreochromis_niloticus
ENSCCAG00000026371	TSN	95	92.754	ENSOANG00000003457	TSN	100	92.754	Ornithorhynchus_anatinus
ENSCCAG00000026371	TSN	100	98.684	ENSOCUG00000023529	TSN	100	98.684	Oryctolagus_cuniculus
ENSCCAG00000026371	TSN	100	78.070	ENSORLG00000010049	tsn	100	78.070	Oryzias_latipes
ENSCCAG00000026371	TSN	98	78.125	ENSORLG00020016476	tsn	99	78.125	Oryzias_latipes_hni
ENSCCAG00000026371	TSN	89	72.642	ENSORLG00020017000	-	84	73.611	Oryzias_latipes_hni
ENSCCAG00000026371	TSN	100	77.632	ENSORLG00015019192	tsn	100	77.632	Oryzias_latipes_hsok
ENSCCAG00000026371	TSN	100	78.070	ENSOMEG00000016335	tsn	100	78.070	Oryzias_melastigma
ENSCCAG00000026371	TSN	100	99.123	ENSOGAG00000030436	TSN	100	99.123	Otolemur_garnettii
ENSCCAG00000026371	TSN	100	98.684	ENSOARG00000013339	TSN	100	98.684	Ovis_aries
ENSCCAG00000026371	TSN	100	99.324	ENSPPAG00000032878	TSN	100	99.324	Pan_paniscus
ENSCCAG00000026371	TSN	96	65.455	ENSPPRG00000004174	-	94	65.455	Panthera_pardus
ENSCCAG00000026371	TSN	100	98.684	ENSPPRG00000006531	TSN	99	98.684	Panthera_pardus
ENSCCAG00000026371	TSN	100	91.216	ENSPTIG00000012953	TSN	99	91.216	Panthera_tigris_altaica
ENSCCAG00000026371	TSN	100	99.324	ENSPTRG00000012420	TSN	100	99.324	Pan_troglodytes
ENSCCAG00000026371	TSN	100	99.123	ENSPANG00000000733	TSN	100	99.123	Papio_anubis
ENSCCAG00000026371	TSN	98	77.679	ENSPKIG00000002005	tsn	99	77.679	Paramormyrops_kingsleyae
ENSCCAG00000026371	TSN	81	88.571	ENSPSIG00000006064	TSN	96	88.571	Pelodiscus_sinensis
ENSCCAG00000026371	TSN	96	78.636	ENSPMGG00000015287	tsn	97	78.636	Periophthalmus_magnuspinnatus
ENSCCAG00000026371	TSN	97	66.516	ENSPMAG00000009161	tsn	95	66.516	Petromyzon_marinus
ENSCCAG00000026371	TSN	96	94.712	ENSPCIG00000023491	TSN	100	95.146	Phascolarctos_cinereus
ENSCCAG00000026371	TSN	100	78.509	ENSPFOG00000016063	tsn	100	78.509	Poecilia_formosa
ENSCCAG00000026371	TSN	100	78.509	ENSPLAG00000010654	tsn	100	78.509	Poecilia_latipinna
ENSCCAG00000026371	TSN	100	78.070	ENSPMEG00000023570	tsn	100	78.070	Poecilia_mexicana
ENSCCAG00000026371	TSN	100	78.070	ENSPREG00000003481	tsn	100	78.070	Poecilia_reticulata
ENSCCAG00000026371	TSN	100	99.123	ENSPPYG00000012774	TSN	100	99.123	Pongo_abelii
ENSCCAG00000026371	TSN	80	96.552	ENSPCAG00000003549	TSN	100	96.552	Procavia_capensis
ENSCCAG00000026371	TSN	100	99.123	ENSPCOG00000011045	TSN	100	99.123	Propithecus_coquereli
ENSCCAG00000026371	TSN	100	98.684	ENSPVAG00000016702	TSN	100	98.684	Pteropus_vampyrus
ENSCCAG00000026371	TSN	100	78.947	ENSPNYG00000012396	tsn	85	78.947	Pundamilia_nyererei
ENSCCAG00000026371	TSN	100	77.193	ENSPNAG00000018140	tsn	100	77.193	Pygocentrus_nattereri
ENSCCAG00000026371	TSN	100	99.123	ENSRNOG00000002319	Tsn	100	99.123	Rattus_norvegicus
ENSCCAG00000026371	TSN	100	99.123	ENSRBIG00000041316	TSN	100	99.123	Rhinopithecus_bieti
ENSCCAG00000026371	TSN	100	99.123	ENSRROG00000029954	TSN	100	99.123	Rhinopithecus_roxellana
ENSCCAG00000026371	TSN	97	87.931	ENSSBOG00000015719	-	83	94.040	Saimiri_boliviensis_boliviensis
ENSCCAG00000026371	TSN	100	99.561	ENSSBOG00000028579	TSN	100	99.561	Saimiri_boliviensis_boliviensis
ENSCCAG00000026371	TSN	100	95.614	ENSSHAG00000011707	TSN	100	95.614	Sarcophilus_harrisii
ENSCCAG00000026371	TSN	98	77.578	ENSSFOG00015020668	tsn	98	77.578	Scleropages_formosus
ENSCCAG00000026371	TSN	100	77.193	ENSSMAG00000005822	tsn	100	77.193	Scophthalmus_maximus
ENSCCAG00000026371	TSN	100	77.193	ENSSDUG00000011388	tsn	100	77.193	Seriola_dumerili
ENSCCAG00000026371	TSN	100	77.193	ENSSLDG00000008206	tsn	100	77.193	Seriola_lalandi_dorsalis
ENSCCAG00000026371	TSN	100	66.667	ENSSARG00000007193	-	100	66.667	Sorex_araneus
ENSCCAG00000026371	TSN	100	85.088	ENSSPUG00000017518	TSN	100	85.088	Sphenodon_punctatus
ENSCCAG00000026371	TSN	100	78.070	ENSSPAG00000009283	tsn	100	78.070	Stegastes_partitus
ENSCCAG00000026371	TSN	100	97.807	ENSSSCG00000015729	TSN	100	97.807	Sus_scrofa
ENSCCAG00000026371	TSN	100	83.843	ENSTGUG00000004445	TSN	100	83.843	Taeniopygia_guttata
ENSCCAG00000026371	TSN	97	76.923	ENSTRUG00000013691	tsn	98	76.923	Takifugu_rubripes
ENSCCAG00000026371	TSN	97	76.471	ENSTNIG00000015707	tsn	97	76.471	Tetraodon_nigroviridis
ENSCCAG00000026371	TSN	100	98.246	ENSTBEG00000015319	TSN	100	98.246	Tupaia_belangeri
ENSCCAG00000026371	TSN	100	98.684	ENSTTRG00000005854	TSN	100	98.684	Tursiops_truncatus
ENSCCAG00000026371	TSN	100	98.684	ENSUAMG00000021618	TSN	100	98.684	Ursus_americanus
ENSCCAG00000026371	TSN	100	97.368	ENSUMAG00000008516	TSN	100	97.368	Ursus_maritimus
ENSCCAG00000026371	TSN	71	66.667	ENSVPAG00000009874	-	100	72.093	Vicugna_pacos
ENSCCAG00000026371	TSN	98	95.794	ENSVVUG00000027555	TSN	99	98.544	Vulpes_vulpes
ENSCCAG00000026371	TSN	100	76.316	ENSXETG00000000838	tsn	100	76.316	Xenopus_tropicalis
ENSCCAG00000026371	TSN	89	74.528	ENSXCOG00000018514	tsn	95	74.194	Xiphophorus_couchianus
ENSCCAG00000026371	TSN	100	78.509	ENSXMAG00000022538	tsn	100	78.509	Xiphophorus_maculatus