EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000026502 (Gene tree)
Gene ID: 108318058
Gene Symbol: PRPF38A
Alias: FLJ14936|Prp38
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 14660 bases
Position: chrKV389640.1:3193694-3208353
Accession: 108318058
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000017377	PRP38	PF03371.15	2.1e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000034839	PRPF38A-201	2619	XM_017548804	ENSCCAP00000017377	311 (aa)	XP_017404293	A0A2K5QN96

Gene Model

Click here to download ENSCCAG00000026502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000026502's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000026502	PRPF38A	100	99.679	ENSG00000134748	PRPF38A	100	99.679	Homo_sapiens
ENSCCAG00000026502	PRPF38A	71	88.688	ENSAPOG00000011652	prpf38a	100	79.487	Acanthochromis_polyacanthus
ENSCCAG00000026502	PRPF38A	100	99.679	ENSAMEG00000009319	PRPF38A	100	99.679	Ailuropoda_melanoleuca
ENSCCAG00000026502	PRPF38A	100	76.527	ENSACIG00000012292	prpf38a	76	85.714	Amphilophus_citrinellus
ENSCCAG00000026502	PRPF38A	71	88.688	ENSAOCG00000018004	prpf38a	100	79.487	Amphiprion_ocellaris
ENSCCAG00000026502	PRPF38A	71	88.688	ENSAPEG00000021414	prpf38a	100	79.487	Amphiprion_percula
ENSCCAG00000026502	PRPF38A	71	89.140	ENSATEG00000004608	prpf38a	75	88.312	Anabas_testudineus
ENSCCAG00000026502	PRPF38A	79	97.166	ENSAPLG00000005827	PRPF38A	99	97.166	Anas_platyrhynchos
ENSCCAG00000026502	PRPF38A	100	94.872	ENSACAG00000008249	PRPF38A	100	94.872	Anolis_carolinensis
ENSCCAG00000026502	PRPF38A	100	66.772	ENSANAG00000029204	-	100	60.635	Aotus_nancymaae
ENSCCAG00000026502	PRPF38A	100	99.679	ENSANAG00000027839	PRPF38A	100	99.679	Aotus_nancymaae
ENSCCAG00000026502	PRPF38A	71	86.425	ENSACLG00000021595	prpf38a	100	77.885	Astatotilapia_calliptera
ENSCCAG00000026502	PRPF38A	100	81.470	ENSAMXG00000029274	prpf38a	100	81.470	Astyanax_mexicanus
ENSCCAG00000026502	PRPF38A	100	99.679	ENSBTAG00000002720	PRPF38A	100	99.679	Bos_taurus
ENSCCAG00000026502	PRPF38A	63	62.564	WBGene00008380	prp-38	67	61.574	Caenorhabditis_elegans
ENSCCAG00000026502	PRPF38A	100	99.679	ENSCJAG00000021594	PRPF38A	100	99.679	Callithrix_jacchus
ENSCCAG00000026502	PRPF38A	100	99.679	ENSCAFG00000003740	PRPF38A	100	99.679	Canis_familiaris
ENSCCAG00000026502	PRPF38A	100	99.679	ENSCAFG00020010939	PRPF38A	100	99.679	Canis_lupus_dingo
ENSCCAG00000026502	PRPF38A	100	99.679	ENSCHIG00000024730	PRPF38A	100	99.679	Capra_hircus
ENSCCAG00000026502	PRPF38A	86	98.513	ENSTSYG00000031994	-	95	98.513	Carlito_syrichta
ENSCCAG00000026502	PRPF38A	100	99.679	ENSTSYG00000009868	-	100	99.679	Carlito_syrichta
ENSCCAG00000026502	PRPF38A	100	99.679	ENSCPOG00000005079	PRPF38A	100	99.679	Cavia_porcellus
ENSCCAG00000026502	PRPF38A	100	64.423	ENSCATG00000044190	-	100	60.129	Cercocebus_atys
ENSCCAG00000026502	PRPF38A	100	99.679	ENSCATG00000032296	PRPF38A	100	99.679	Cercocebus_atys
ENSCCAG00000026502	PRPF38A	100	99.679	ENSCLAG00000005816	PRPF38A	100	99.679	Chinchilla_lanigera
ENSCCAG00000026502	PRPF38A	77	97.917	ENSCHOG00000008388	PRPF38A	77	97.917	Choloepus_hoffmanni
ENSCCAG00000026502	PRPF38A	100	97.756	ENSCPBG00000014791	PRPF38A	100	97.756	Chrysemys_picta_bellii
ENSCCAG00000026502	PRPF38A	68	71.429	ENSCSAVG00000009580	-	78	65.678	Ciona_savignyi
ENSCCAG00000026502	PRPF38A	96	99.666	ENSCANG00000032608	PRPF38A	100	99.666	Colobus_angolensis_palliatus
ENSCCAG00000026502	PRPF38A	100	99.359	ENSCGRG00001018502	-	100	99.359	Cricetulus_griseus_chok1gshd
ENSCCAG00000026502	PRPF38A	74	84.848	ENSCGRG00001002557	-	78	84.848	Cricetulus_griseus_chok1gshd
ENSCCAG00000026502	PRPF38A	100	99.359	ENSCGRG00000014868	Prpf38a	100	99.359	Cricetulus_griseus_crigri
ENSCCAG00000026502	PRPF38A	71	87.783	ENSCSEG00000001269	prpf38a	79	87.013	Cynoglossus_semilaevis
ENSCCAG00000026502	PRPF38A	71	90.498	ENSCVAG00000012305	prpf38a	75	89.610	Cyprinodon_variegatus
ENSCCAG00000026502	PRPF38A	100	80.831	ENSDARG00000039213	prpf38a	100	80.831	Danio_rerio
ENSCCAG00000026502	PRPF38A	100	99.679	ENSDNOG00000042326	PRPF38A	100	99.679	Dasypus_novemcinctus
ENSCCAG00000026502	PRPF38A	100	85.577	ENSDORG00000023857	-	100	85.577	Dipodomys_ordii
ENSCCAG00000026502	PRPF38A	85	83.270	ENSDORG00000023691	-	78	87.665	Dipodomys_ordii
ENSCCAG00000026502	PRPF38A	85	83.270	ENSDORG00000025371	-	78	87.665	Dipodomys_ordii
ENSCCAG00000026502	PRPF38A	76	81.092	ENSEBUG00000012588	prpf38a	75	81.116	Eptatretus_burgeri
ENSCCAG00000026502	PRPF38A	100	99.679	ENSEASG00005014427	PRPF38A	100	99.679	Equus_asinus_asinus
ENSCCAG00000026502	PRPF38A	100	99.679	ENSECAG00000022628	PRPF38A	100	99.679	Equus_caballus
ENSCCAG00000026502	PRPF38A	71	86.878	ENSELUG00000021094	prpf38a	100	78.205	Esox_lucius
ENSCCAG00000026502	PRPF38A	100	99.679	ENSFCAG00000002518	PRPF38A	100	99.679	Felis_catus
ENSCCAG00000026502	PRPF38A	99	85.161	ENSFALG00000003612	-	77	90.043	Ficedula_albicollis
ENSCCAG00000026502	PRPF38A	87	96.310	ENSFALG00000005598	-	100	96.310	Ficedula_albicollis
ENSCCAG00000026502	PRPF38A	100	99.359	ENSFDAG00000011287	PRPF38A	100	99.359	Fukomys_damarensis
ENSCCAG00000026502	PRPF38A	84	78.788	ENSFHEG00000014317	prpf38a	78	88.745	Fundulus_heteroclitus
ENSCCAG00000026502	PRPF38A	53	94.578	ENSGMOG00000011384	prpf38a	54	94.578	Gadus_morhua
ENSCCAG00000026502	PRPF38A	100	97.436	ENSGALG00000010627	PRPF38A	100	97.436	Gallus_gallus
ENSCCAG00000026502	PRPF38A	71	90.498	ENSGAFG00000012422	prpf38a	75	89.610	Gambusia_affinis
ENSCCAG00000026502	PRPF38A	71	86.099	ENSGACG00000005423	prpf38a	75	85.408	Gasterosteus_aculeatus
ENSCCAG00000026502	PRPF38A	100	98.077	ENSGAGG00000020547	PRPF38A	100	98.077	Gopherus_agassizii
ENSCCAG00000026502	PRPF38A	100	99.679	ENSGGOG00000003940	PRPF38A	100	99.679	Gorilla_gorilla
ENSCCAG00000026502	PRPF38A	61	91.005	ENSHBUG00000020572	prpf38a	80	90.957	Haplochromis_burtoni
ENSCCAG00000026502	PRPF38A	100	82.372	ENSHGLG00000007918	-	100	82.372	Heterocephalus_glaber_female
ENSCCAG00000026502	PRPF38A	100	99.679	ENSHGLG00000000475	PRPF38A	100	99.679	Heterocephalus_glaber_female
ENSCCAG00000026502	PRPF38A	100	99.679	ENSHGLG00100008935	PRPF38A	100	99.679	Heterocephalus_glaber_male
ENSCCAG00000026502	PRPF38A	100	82.372	ENSHGLG00100003928	-	100	82.372	Heterocephalus_glaber_male
ENSCCAG00000026502	PRPF38A	87	69.373	ENSHCOG00000020781	prpf38a	59	90.957	Hippocampus_comes
ENSCCAG00000026502	PRPF38A	74	87.500	ENSIPUG00000005757	prpf38a	75	87.500	Ictalurus_punctatus
ENSCCAG00000026502	PRPF38A	100	99.679	ENSSTOG00000015610	PRPF38A	100	99.679	Ictidomys_tridecemlineatus
ENSCCAG00000026502	PRPF38A	100	98.397	ENSJJAG00000015811	Prpf38a	100	98.397	Jaculus_jaculus
ENSCCAG00000026502	PRPF38A	71	90.045	ENSKMAG00000006588	prpf38a	75	89.177	Kryptolebias_marmoratus
ENSCCAG00000026502	PRPF38A	95	78.859	ENSLBEG00000020585	prpf38a	100	81.672	Labrus_bergylta
ENSCCAG00000026502	PRPF38A	100	91.346	ENSLACG00000011495	PRPF38A	100	91.346	Latimeria_chalumnae
ENSCCAG00000026502	PRPF38A	100	79.233	ENSLOCG00000006262	prpf38a	100	79.167	Lepisosteus_oculatus
ENSCCAG00000026502	PRPF38A	100	99.679	ENSLAFG00000025862	PRPF38A	100	99.679	Loxodonta_africana
ENSCCAG00000026502	PRPF38A	100	99.679	ENSMFAG00000039449	PRPF38A	100	99.679	Macaca_fascicularis
ENSCCAG00000026502	PRPF38A	87	98.897	ENSMMUG00000014333	PRPF38A	98	98.897	Macaca_mulatta
ENSCCAG00000026502	PRPF38A	100	64.744	ENSMNEG00000040242	-	100	60.772	Macaca_nemestrina
ENSCCAG00000026502	PRPF38A	100	99.679	ENSMNEG00000031221	PRPF38A	100	99.679	Macaca_nemestrina
ENSCCAG00000026502	PRPF38A	100	99.679	ENSMLEG00000041105	PRPF38A	100	99.679	Mandrillus_leucophaeus
ENSCCAG00000026502	PRPF38A	71	88.235	ENSMAMG00000015431	prpf38a	100	79.167	Mastacembelus_armatus
ENSCCAG00000026502	PRPF38A	71	86.425	ENSMZEG00005017838	prpf38a	100	77.885	Maylandia_zebra
ENSCCAG00000026502	PRPF38A	96	97.324	ENSMGAG00000011176	PRPF38A	100	97.324	Meleagris_gallopavo
ENSCCAG00000026502	PRPF38A	85	94.697	ENSMAUG00000018029	-	87	94.805	Mesocricetus_auratus
ENSCCAG00000026502	PRPF38A	100	99.679	ENSMICG00000014193	PRPF38A	100	99.679	Microcebus_murinus
ENSCCAG00000026502	PRPF38A	100	99.359	ENSMOCG00000013080	Prpf38a	100	99.359	Microtus_ochrogaster
ENSCCAG00000026502	PRPF38A	83	81.783	ENSMMOG00000016972	prpf38a	81	87.446	Mola_mola
ENSCCAG00000026502	PRPF38A	100	98.083	ENSMODG00000000644	PRPF38A	100	98.083	Monodelphis_domestica
ENSCCAG00000026502	PRPF38A	71	88.235	ENSMALG00000019363	prpf38a	97	79.167	Monopterus_albus
ENSCCAG00000026502	PRPF38A	100	98.397	MGP_CAROLIEiJ_G0026269	Prpf38a	100	98.397	Mus_caroli
ENSCCAG00000026502	PRPF38A	100	98.397	ENSMUSG00000063800	Prpf38a	100	98.397	Mus_musculus
ENSCCAG00000026502	PRPF38A	100	98.397	MGP_PahariEiJ_G0028602	Prpf38a	100	98.397	Mus_pahari
ENSCCAG00000026502	PRPF38A	100	98.077	MGP_SPRETEiJ_G0027238	Prpf38a	100	98.522	Mus_spretus
ENSCCAG00000026502	PRPF38A	100	99.679	ENSMPUG00000006896	PRPF38A	100	99.679	Mustela_putorius_furo
ENSCCAG00000026502	PRPF38A	100	99.359	ENSNGAG00000011884	Prpf38a	100	99.359	Nannospalax_galili
ENSCCAG00000026502	PRPF38A	71	85.068	ENSNBRG00000004013	prpf38a	74	84.416	Neolamprologus_brichardi
ENSCCAG00000026502	PRPF38A	97	73.510	ENSNLEG00000012592	-	83	72.414	Nomascus_leucogenys
ENSCCAG00000026502	PRPF38A	93	99.654	ENSNLEG00000017999	PRPF38A	93	99.654	Nomascus_leucogenys
ENSCCAG00000026502	PRPF38A	100	66.987	ENSNLEG00000033398	-	94	66.346	Nomascus_leucogenys
ENSCCAG00000026502	PRPF38A	100	93.910	ENSMEUG00000003860	PRPF38A	100	93.910	Notamacropus_eugenii
ENSCCAG00000026502	PRPF38A	77	99.583	ENSOPRG00000008985	PRPF38A	100	99.583	Ochotona_princeps
ENSCCAG00000026502	PRPF38A	100	99.679	ENSODEG00000005869	PRPF38A	100	99.679	Octodon_degus
ENSCCAG00000026502	PRPF38A	71	86.878	ENSONIG00000007816	prpf38a	100	78.205	Oreochromis_niloticus
ENSCCAG00000026502	PRPF38A	100	64.013	ENSOANG00000009541	-	100	64.013	Ornithorhynchus_anatinus
ENSCCAG00000026502	PRPF38A	100	99.679	ENSOCUG00000000963	PRPF38A	100	99.679	Oryctolagus_cuniculus
ENSCCAG00000026502	PRPF38A	96	82.000	ENSORLG00000013485	prpf38a	82	89.610	Oryzias_latipes
ENSCCAG00000026502	PRPF38A	96	82.000	ENSORLG00020002130	prpf38a	82	89.610	Oryzias_latipes_hni
ENSCCAG00000026502	PRPF38A	96	81.667	ENSORLG00015021393	prpf38a	78	89.177	Oryzias_latipes_hsok
ENSCCAG00000026502	PRPF38A	95	81.544	ENSOMEG00000016333	prpf38a	75	89.177	Oryzias_melastigma
ENSCCAG00000026502	PRPF38A	100	99.679	ENSOGAG00000005423	PRPF38A	100	99.679	Otolemur_garnettii
ENSCCAG00000026502	PRPF38A	100	99.679	ENSOARG00000005373	PRPF38A	100	99.679	Ovis_aries
ENSCCAG00000026502	PRPF38A	100	77.244	ENSPPAG00000033867	-	100	75.962	Pan_paniscus
ENSCCAG00000026502	PRPF38A	100	99.679	ENSPPAG00000030905	PRPF38A	100	99.679	Pan_paniscus
ENSCCAG00000026502	PRPF38A	100	99.679	ENSPPRG00000013268	PRPF38A	100	99.679	Panthera_pardus
ENSCCAG00000026502	PRPF38A	100	99.679	ENSPTIG00000015419	PRPF38A	100	99.679	Panthera_tigris_altaica
ENSCCAG00000026502	PRPF38A	100	99.679	ENSPTRG00000000739	PRPF38A	100	99.679	Pan_troglodytes
ENSCCAG00000026502	PRPF38A	100	99.679	ENSPANG00000015483	PRPF38A	100	99.679	Papio_anubis
ENSCCAG00000026502	PRPF38A	100	77.885	ENSPKIG00000011439	prpf38a	100	77.814	Paramormyrops_kingsleyae
ENSCCAG00000026502	PRPF38A	100	97.436	ENSPSIG00000017487	PRPF38A	100	97.436	Pelodiscus_sinensis
ENSCCAG00000026502	PRPF38A	70	89.401	ENSPMGG00000021352	prpf38a	79	88.312	Periophthalmus_magnuspinnatus
ENSCCAG00000026502	PRPF38A	100	93.333	ENSPEMG00000011212	-	100	93.333	Peromyscus_maniculatus_bairdii
ENSCCAG00000026502	PRPF38A	100	99.359	ENSPEMG00000023277	-	100	99.359	Peromyscus_maniculatus_bairdii
ENSCCAG00000026502	PRPF38A	100	97.764	ENSPCIG00000022369	-	100	97.764	Phascolarctos_cinereus
ENSCCAG00000026502	PRPF38A	83	81.467	ENSPFOG00000004248	prpf38a	100	76.923	Poecilia_formosa
ENSCCAG00000026502	PRPF38A	91	77.778	ENSPLAG00000010328	prpf38a	75	89.610	Poecilia_latipinna
ENSCCAG00000026502	PRPF38A	84	79.323	ENSPMEG00000011804	prpf38a	75	89.610	Poecilia_mexicana
ENSCCAG00000026502	PRPF38A	83	77.947	ENSPREG00000002835	prpf38a	58	94.149	Poecilia_reticulata
ENSCCAG00000026502	PRPF38A	100	90.536	ENSPPYG00000001348	PRPF38A	100	90.536	Pongo_abelii
ENSCCAG00000026502	PRPF38A	100	99.038	ENSPCAG00000013328	PRPF38A	100	99.038	Procavia_capensis
ENSCCAG00000026502	PRPF38A	100	99.679	ENSPCOG00000016387	-	100	99.679	Propithecus_coquereli
ENSCCAG00000026502	PRPF38A	100	74.598	ENSPCOG00000020709	-	76	81.385	Propithecus_coquereli
ENSCCAG00000026502	PRPF38A	100	99.679	ENSPVAG00000009803	PRPF38A	100	99.679	Pteropus_vampyrus
ENSCCAG00000026502	PRPF38A	71	86.425	ENSPNYG00000005571	prpf38a	100	77.885	Pundamilia_nyererei
ENSCCAG00000026502	PRPF38A	100	81.470	ENSPNAG00000010399	prpf38a	100	81.470	Pygocentrus_nattereri
ENSCCAG00000026502	PRPF38A	100	99.038	ENSRNOG00000009451	Prpf38a	100	99.038	Rattus_norvegicus
ENSCCAG00000026502	PRPF38A	100	62.179	ENSRBIG00000034053	-	100	56.913	Rhinopithecus_bieti
ENSCCAG00000026502	PRPF38A	100	99.679	ENSRBIG00000036442	PRPF38A	100	99.679	Rhinopithecus_bieti
ENSCCAG00000026502	PRPF38A	100	99.679	ENSRROG00000032788	PRPF38A	100	99.679	Rhinopithecus_roxellana
ENSCCAG00000026502	PRPF38A	98	77.778	ENSRROG00000040003	-	76	80.087	Rhinopithecus_roxellana
ENSCCAG00000026502	PRPF38A	100	99.679	ENSSBOG00000019515	PRPF38A	100	99.679	Saimiri_boliviensis_boliviensis
ENSCCAG00000026502	PRPF38A	78	78.689	ENSSHAG00000006029	-	74	81.900	Sarcophilus_harrisii
ENSCCAG00000026502	PRPF38A	86	97.417	ENSSHAG00000006906	-	100	97.417	Sarcophilus_harrisii
ENSCCAG00000026502	PRPF38A	100	77.955	ENSSFOG00015013572	prpf38a	100	77.244	Scleropages_formosus
ENSCCAG00000026502	PRPF38A	71	88.688	ENSSMAG00000015379	prpf38a	75	87.879	Scophthalmus_maximus
ENSCCAG00000026502	PRPF38A	71	89.140	ENSSDUG00000001324	prpf38a	75	88.312	Seriola_dumerili
ENSCCAG00000026502	PRPF38A	71	89.140	ENSSLDG00000014803	prpf38a	75	88.312	Seriola_lalandi_dorsalis
ENSCCAG00000026502	PRPF38A	100	82.372	ENSSARG00000014458	PRPF38A	100	82.372	Sorex_araneus
ENSCCAG00000026502	PRPF38A	100	95.192	ENSSPUG00000013259	PRPF38A	100	95.192	Sphenodon_punctatus
ENSCCAG00000026502	PRPF38A	71	70.588	ENSSPAG00000010449	prpf38a	72	70.563	Stegastes_partitus
ENSCCAG00000026502	PRPF38A	100	99.679	ENSSSCG00000028288	PRPF38A	100	99.679	Sus_scrofa
ENSCCAG00000026502	PRPF38A	100	92.628	ENSTGUG00000008995	PRPF38A	100	92.628	Taeniopygia_guttata
ENSCCAG00000026502	PRPF38A	71	88.235	ENSTRUG00000003374	prpf38a	71	87.446	Takifugu_rubripes
ENSCCAG00000026502	PRPF38A	71	86.547	ENSTNIG00000005533	prpf38a	100	77.707	Tetraodon_nigroviridis
ENSCCAG00000026502	PRPF38A	100	99.038	ENSTBEG00000000725	PRPF38A	100	99.038	Tupaia_belangeri
ENSCCAG00000026502	PRPF38A	100	99.679	ENSTTRG00000016139	PRPF38A	100	99.679	Tursiops_truncatus
ENSCCAG00000026502	PRPF38A	100	99.679	ENSUAMG00000000625	PRPF38A	100	99.679	Ursus_americanus
ENSCCAG00000026502	PRPF38A	100	99.679	ENSUMAG00000022674	PRPF38A	100	99.679	Ursus_maritimus
ENSCCAG00000026502	PRPF38A	74	99.567	ENSVPAG00000000907	PRPF38A	74	99.567	Vicugna_pacos
ENSCCAG00000026502	PRPF38A	100	99.679	ENSVVUG00000004475	PRPF38A	100	99.679	Vulpes_vulpes
ENSCCAG00000026502	PRPF38A	100	83.387	ENSXETG00000008060	prpf38a	100	87.220	Xenopus_tropicalis
ENSCCAG00000026502	PRPF38A	71	88.341	ENSXCOG00000007393	prpf38a	77	87.554	Xiphophorus_couchianus
ENSCCAG00000026502	PRPF38A	71	90.498	ENSXMAG00000026143	prpf38a	75	89.610	Xiphophorus_maculatus