EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000026577 (Gene tree)
Gene ID: 108305568
Gene Symbol: -
Alias: -
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 10225 bases
Position: chrKV389490.1:3566767-3576991
Accession: 108305568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000017515	Ribosomal_S18	PF01084.20	6.5e-22	1	1
ENSCCAP00000017524	Ribosomal_S18	PF01084.20	6.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000034986	-	351	-	ENSCCAP00000017524	116 (aa)	-	A0A2K5QNQ8
ENSCCAT00000034977	-	791	XM_017530249	ENSCCAP00000017515	144 (aa)	XP_017385738	A0A2K5QNW0
ENSCCAT00000034988	-	213	-	ENSCCAP00000017526	71 (aa)	-	A0A2K5QNQ2

Gene Model

Click here to download ENSCCAG00000026577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000026577's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000026577	-	99	81.818	ENSCCAG00000025155	-	95	81.818
ENSCCAG00000026577	-	100	95.833	ENSCCAG00000019347	-	100	95.833
ENSCCAG00000026577	-	100	81.250	ENSCCAG00000028283	-	100	81.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000026577	-	100	93.103	ENSG00000163319	MRPS18C	100	93.103	Homo_sapiens
ENSCCAG00000026577	-	100	75.694	ENSAMEG00000004915	MRPS18C	100	75.694	Ailuropoda_melanoleuca
ENSCCAG00000026577	-	100	85.417	ENSANAG00000028055	-	100	85.417	Aotus_nancymaae
ENSCCAG00000026577	-	99	78.992	ENSANAG00000025323	-	94	78.992	Aotus_nancymaae
ENSCCAG00000026577	-	100	73.276	ENSBTAG00000049836	-	100	73.276	Bos_taurus
ENSCCAG00000026577	-	100	81.944	ENSBTAG00000018155	MRPS18C	100	81.944	Bos_taurus
ENSCCAG00000026577	-	100	96.528	ENSCJAG00000042247	MRPS18C	100	95.690	Callithrix_jacchus
ENSCCAG00000026577	-	100	81.944	ENSCAFG00020010491	MRPS18C	100	81.944	Canis_lupus_dingo
ENSCCAG00000026577	-	100	71.528	ENSCHIG00000022740	-	100	71.528	Capra_hircus
ENSCCAG00000026577	-	100	67.241	ENSCHIG00000016551	-	100	67.241	Capra_hircus
ENSCCAG00000026577	-	75	74.074	ENSCHIG00000019359	-	98	74.074	Capra_hircus
ENSCCAG00000026577	-	99	68.750	ENSCHIG00000018805	-	99	68.750	Capra_hircus
ENSCCAG00000026577	-	91	86.260	ENSCHIG00000004461	-	91	86.260	Capra_hircus
ENSCCAG00000026577	-	100	83.333	ENSTSYG00000012924	MRPS18C	100	83.333	Carlito_syrichta
ENSCCAG00000026577	-	100	81.944	ENSCPOG00000009198	MRPS18C	100	81.944	Cavia_porcellus
ENSCCAG00000026577	-	100	95.833	ENSCATG00000040697	MRPS18C	100	95.833	Cercocebus_atys
ENSCCAG00000026577	-	100	82.192	ENSCLAG00000008205	-	100	82.192	Chinchilla_lanigera
ENSCCAG00000026577	-	100	82.639	ENSCLAG00000017397	-	100	82.639	Chinchilla_lanigera
ENSCCAG00000026577	-	100	95.833	ENSCANG00000038907	MRPS18C	100	95.833	Colobus_angolensis_palliatus
ENSCCAG00000026577	-	100	77.778	ENSCANG00000041165	-	100	77.778	Colobus_angolensis_palliatus
ENSCCAG00000026577	-	98	83.333	ENSCANG00000037347	-	97	83.333	Colobus_angolensis_palliatus
ENSCCAG00000026577	-	100	83.333	ENSCGRG00001000103	Mrps18c	100	83.333	Cricetulus_griseus_chok1gshd
ENSCCAG00000026577	-	100	83.333	ENSCGRG00000002192	Mrps18c	100	83.333	Cricetulus_griseus_crigri
ENSCCAG00000026577	-	99	80.986	ENSDORG00000012749	Mrps18c	100	80.986	Dipodomys_ordii
ENSCCAG00000026577	-	100	54.225	ENSETEG00000012223	-	100	54.225	Echinops_telfairi
ENSCCAG00000026577	-	100	85.417	ENSEASG00005013234	MRPS18C	100	85.417	Equus_asinus_asinus
ENSCCAG00000026577	-	100	86.111	ENSECAG00000020387	MRPS18C	100	86.111	Equus_caballus
ENSCCAG00000026577	-	100	59.722	ENSEEUG00000003504	MRPS18C	99	59.722	Erinaceus_europaeus
ENSCCAG00000026577	-	100	81.944	ENSFCAG00000042464	MRPS18C	100	81.944	Felis_catus
ENSCCAG00000026577	-	100	82.639	ENSFDAG00000000250	-	100	82.639	Fukomys_damarensis
ENSCCAG00000026577	-	100	70.139	ENSFDAG00000008778	-	100	70.139	Fukomys_damarensis
ENSCCAG00000026577	-	100	76.724	ENSGGOG00000037903	-	100	76.724	Gorilla_gorilla
ENSCCAG00000026577	-	100	78.472	ENSGGOG00000008603	MRPS18C	100	78.472	Gorilla_gorilla
ENSCCAG00000026577	-	100	83.621	ENSGGOG00000040785	-	100	83.621	Gorilla_gorilla
ENSCCAG00000026577	-	100	77.083	ENSHGLG00000020134	-	100	77.083	Heterocephalus_glaber_female
ENSCCAG00000026577	-	100	76.389	ENSHGLG00000012671	-	98	76.389	Heterocephalus_glaber_female
ENSCCAG00000026577	-	100	82.192	ENSHGLG00000002953	-	100	82.192	Heterocephalus_glaber_female
ENSCCAG00000026577	-	100	76.389	ENSHGLG00100015568	-	98	76.389	Heterocephalus_glaber_male
ENSCCAG00000026577	-	100	77.083	ENSHGLG00100019678	-	100	77.083	Heterocephalus_glaber_male
ENSCCAG00000026577	-	100	82.192	ENSHGLG00100016235	-	100	82.192	Heterocephalus_glaber_male
ENSCCAG00000026577	-	100	84.028	ENSSTOG00000007989	MRPS18C	100	84.028	Ictidomys_tridecemlineatus
ENSCCAG00000026577	-	100	68.103	ENSJJAG00000022437	Mrps18c	100	68.103	Jaculus_jaculus
ENSCCAG00000026577	-	100	81.944	ENSLAFG00000001059	MRPS18C	100	81.944	Loxodonta_africana
ENSCCAG00000026577	-	100	77.500	ENSMFAG00000041276	-	100	77.500	Macaca_fascicularis
ENSCCAG00000026577	-	100	94.444	ENSMFAG00000003991	MRPS18C	100	94.444	Macaca_fascicularis
ENSCCAG00000026577	-	100	80.556	ENSMMUG00000039146	-	100	80.556	Macaca_mulatta
ENSCCAG00000026577	-	100	82.639	ENSMMUG00000048717	-	100	82.639	Macaca_mulatta
ENSCCAG00000026577	-	100	93.966	ENSMMUG00000015353	MRPS18C	100	93.966	Macaca_mulatta
ENSCCAG00000026577	-	100	73.333	ENSMNEG00000018700	-	100	73.333	Macaca_nemestrina
ENSCCAG00000026577	-	100	94.444	ENSMNEG00000043663	MRPS18C	100	94.444	Macaca_nemestrina
ENSCCAG00000026577	-	100	95.833	ENSMLEG00000038884	MRPS18C	100	95.833	Mandrillus_leucophaeus
ENSCCAG00000026577	-	100	85.417	ENSMICG00000032609	-	100	85.417	Microcebus_murinus
ENSCCAG00000026577	-	100	79.487	ENSMICG00000037615	-	100	79.487	Microcebus_murinus
ENSCCAG00000026577	-	100	79.861	ENSMOCG00000009898	-	100	79.861	Microtus_ochrogaster
ENSCCAG00000026577	-	100	81.250	ENSMOCG00000015591	-	100	81.250	Microtus_ochrogaster
ENSCCAG00000026577	-	97	73.944	ENSMODG00000020773	MRPS18C	99	73.944	Monodelphis_domestica
ENSCCAG00000026577	-	100	78.082	MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.082	Mus_caroli
ENSCCAG00000026577	-	100	76.712	ENSMUSG00000016833	Mrps18c	100	76.712	Mus_musculus
ENSCCAG00000026577	-	100	79.452	MGP_PahariEiJ_G0017236	Mrps18c	100	79.452	Mus_pahari
ENSCCAG00000026577	-	83	75.410	MGP_SPRETEiJ_G0028455	Mrps18c	93	75.410	Mus_spretus
ENSCCAG00000026577	-	100	80.556	ENSMLUG00000017057	MRPS18C	100	80.556	Myotis_lucifugus
ENSCCAG00000026577	-	88	88.889	ENSNGAG00000015980	Mrps18c	100	83.333	Nannospalax_galili
ENSCCAG00000026577	-	100	93.750	ENSNLEG00000009119	MRPS18C	100	93.750	Nomascus_leucogenys
ENSCCAG00000026577	-	100	87.500	ENSNLEG00000018188	-	100	87.500	Nomascus_leucogenys
ENSCCAG00000026577	-	69	78.788	ENSOPRG00000004113	MRPS18C	68	78.788	Ochotona_princeps
ENSCCAG00000026577	-	100	79.452	ENSODEG00000007599	-	100	79.452	Octodon_degus
ENSCCAG00000026577	-	100	81.250	ENSODEG00000020349	-	100	81.250	Octodon_degus
ENSCCAG00000026577	-	100	83.333	ENSOARG00000002770	MRPS18C	100	83.333	Ovis_aries
ENSCCAG00000026577	-	100	93.103	ENSPPAG00000037122	MRPS18C	100	93.103	Pan_paniscus
ENSCCAG00000026577	-	100	77.586	ENSPPAG00000037400	-	100	77.586	Pan_paniscus
ENSCCAG00000026577	-	100	82.639	ENSPPRG00000011089	MRPS18C	100	82.639	Panthera_pardus
ENSCCAG00000026577	-	100	81.944	ENSPTIG00000021242	MRPS18C	100	81.944	Panthera_tigris_altaica
ENSCCAG00000026577	-	100	76.724	ENSPTRG00000047058	-	100	76.724	Pan_troglodytes
ENSCCAG00000026577	-	100	93.103	ENSPTRG00000016233	MRPS18C	100	93.103	Pan_troglodytes
ENSCCAG00000026577	-	100	80.556	ENSPANG00000034202	-	100	80.556	Papio_anubis
ENSCCAG00000026577	-	100	94.444	ENSPANG00000033931	MRPS18C	100	94.444	Papio_anubis
ENSCCAG00000026577	-	100	80.556	ENSPEMG00000008390	Mrps18c	100	80.556	Peromyscus_maniculatus_bairdii
ENSCCAG00000026577	-	99	73.239	ENSPCIG00000005376	-	100	73.239	Phascolarctos_cinereus
ENSCCAG00000026577	-	71	91.176	ENSPCIG00000019737	-	100	91.176	Phascolarctos_cinereus
ENSCCAG00000026577	-	98	64.539	ENSPCIG00000000097	-	99	64.539	Phascolarctos_cinereus
ENSCCAG00000026577	-	99	88.811	ENSPPYG00000025835	-	100	88.811	Pongo_abelii
ENSCCAG00000026577	-	100	96.528	ENSPPYG00000025867	MRPS18C	100	96.528	Pongo_abelii
ENSCCAG00000026577	-	100	81.250	ENSPCAG00000004975	MRPS18C	100	81.250	Procavia_capensis
ENSCCAG00000026577	-	100	86.111	ENSPCOG00000017634	MRPS18C	100	86.111	Propithecus_coquereli
ENSCCAG00000026577	-	69	81.818	ENSPVAG00000006439	MRPS18C	100	81.818	Pteropus_vampyrus
ENSCCAG00000026577	-	100	76.027	ENSRNOG00000002178	Mrps18c	100	76.027	Rattus_norvegicus
ENSCCAG00000026577	-	100	75.000	ENSRBIG00000031637	-	100	75.000	Rhinopithecus_bieti
ENSCCAG00000026577	-	100	81.250	ENSRBIG00000035023	-	100	81.250	Rhinopithecus_bieti
ENSCCAG00000026577	-	100	95.833	ENSRBIG00000041685	MRPS18C	100	95.833	Rhinopithecus_bieti
ENSCCAG00000026577	-	100	74.138	ENSRROG00000030722	-	100	74.138	Rhinopithecus_roxellana
ENSCCAG00000026577	-	100	81.250	ENSRROG00000033834	-	100	81.250	Rhinopithecus_roxellana
ENSCCAG00000026577	-	100	95.833	ENSRROG00000044334	MRPS18C	100	95.833	Rhinopithecus_roxellana
ENSCCAG00000026577	-	100	72.222	ENSSBOG00000029234	-	100	72.222	Saimiri_boliviensis_boliviensis
ENSCCAG00000026577	-	100	94.444	ENSSBOG00000027568	-	100	94.444	Saimiri_boliviensis_boliviensis
ENSCCAG00000026577	-	96	78.986	ENSSBOG00000032292	-	99	78.986	Saimiri_boliviensis_boliviensis
ENSCCAG00000026577	-	99	83.217	ENSSBOG00000022205	-	92	83.217	Saimiri_boliviensis_boliviensis
ENSCCAG00000026577	-	92	77.206	ENSSHAG00000007084	MRPS18C	94	77.206	Sarcophilus_harrisii
ENSCCAG00000026577	-	100	84.028	ENSSSCG00000038042	MRPS18C	100	84.028	Sus_scrofa
ENSCCAG00000026577	-	100	81.944	ENSTBEG00000012505	MRPS18C	100	81.944	Tupaia_belangeri
ENSCCAG00000026577	-	100	86.806	ENSTTRG00000004897	MRPS18C	100	86.806	Tursiops_truncatus
ENSCCAG00000026577	-	100	86.806	ENSUAMG00000012878	MRPS18C	100	86.806	Ursus_americanus
ENSCCAG00000026577	-	100	86.806	ENSUMAG00000008829	MRPS18C	100	86.806	Ursus_maritimus
ENSCCAG00000026577	-	100	84.722	ENSVPAG00000011358	MRPS18C	100	84.722	Vicugna_pacos
ENSCCAG00000026577	-	100	81.944	ENSVVUG00000015672	MRPS18C	100	81.944	Vulpes_vulpes