EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000026775 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 4579 bases
Position: chrKV390051.1:457099-461677
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000017910	Nop16	PF09420.10	1.1e-19	1	2
ENSCCAP00000017910	Nop16	PF09420.10	1.1e-19	2	2
ENSCCAP00000017901	Nop16	PF09420.10	9.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000035367	-	456	-	ENSCCAP00000017901	151 (aa)	-	A0A2K5QPT0
ENSCCAT00000035376	-	519	-	ENSCCAP00000017910	172 (aa)	-	A0A2K5QQ01

Gene Model

Click here to download ENSCCAG00000026775's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000026775's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000026775	-	93	90.000	ENSCCAG00000020691	NOP16	90	90.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000026775	-	91	52.532	ENSAPOG00000010682	-	89	52.532	Acanthochromis_polyacanthus
ENSCCAG00000026775	-	97	86.228	ENSAMEG00000006988	-	94	86.228	Ailuropoda_melanoleuca
ENSCCAG00000026775	-	94	50.932	ENSACIG00000019263	nop16	90	50.932	Amphilophus_citrinellus
ENSCCAG00000026775	-	91	52.532	ENSAOCG00000005504	nop16	89	52.532	Amphiprion_ocellaris
ENSCCAG00000026775	-	91	52.532	ENSAPEG00000006605	nop16	89	52.532	Amphiprion_percula
ENSCCAG00000026775	-	94	51.553	ENSATEG00000014089	nop16	90	51.553	Anabas_testudineus
ENSCCAG00000026775	-	93	66.250	ENSACAG00000006333	-	90	66.250	Anolis_carolinensis
ENSCCAG00000026775	-	99	77.193	ENSANAG00000027410	-	96	77.193	Aotus_nancymaae
ENSCCAG00000026775	-	93	87.500	ENSANAG00000015743	-	90	87.500	Aotus_nancymaae
ENSCCAG00000026775	-	94	51.553	ENSACLG00000025227	nop16	90	51.553	Astatotilapia_calliptera
ENSCCAG00000026775	-	82	42.254	ENSAMXG00000006843	nop16	93	40.854	Astyanax_mexicanus
ENSCCAG00000026775	-	93	87.500	ENSBTAG00000010734	NOP16	90	87.500	Bos_taurus
ENSCCAG00000026775	-	93	90.000	ENSCAFG00000016694	NOP16	90	90.000	Canis_familiaris
ENSCCAG00000026775	-	93	90.000	ENSCAFG00020011505	-	88	87.591	Canis_lupus_dingo
ENSCCAG00000026775	-	93	87.500	ENSCHIG00000022082	-	90	87.500	Capra_hircus
ENSCCAG00000026775	-	93	73.125	ENSTSYG00000032690	-	89	73.125	Carlito_syrichta
ENSCCAG00000026775	-	93	87.500	ENSTSYG00000030409	-	90	87.500	Carlito_syrichta
ENSCCAG00000026775	-	100	79.769	ENSCPOG00000026072	-	96	79.769	Cavia_porcellus
ENSCCAG00000026775	-	93	85.625	ENSCLAG00000015405	-	90	85.625	Chinchilla_lanigera
ENSCCAG00000026775	-	93	89.375	ENSCSAG00000009400	-	90	89.375	Chlorocebus_sabaeus
ENSCCAG00000026775	-	99	64.972	ENSCPBG00000022647	-	98	64.972	Chrysemys_picta_bellii
ENSCCAG00000026775	-	91	44.099	ENSCING00000006179	-	87	44.099	Ciona_intestinalis
ENSCCAG00000026775	-	91	41.772	ENSCSAVG00000000269	-	87	41.772	Ciona_savignyi
ENSCCAG00000026775	-	93	87.500	ENSCGRG00001004259	Nop16	90	87.500	Cricetulus_griseus_chok1gshd
ENSCCAG00000026775	-	93	87.500	ENSCGRG00000010975	Nop16	90	87.500	Cricetulus_griseus_crigri
ENSCCAG00000026775	-	93	47.500	ENSCSEG00000020523	nop16	91	47.500	Cynoglossus_semilaevis
ENSCCAG00000026775	-	91	50.955	ENSCVAG00000020140	nop16	88	50.955	Cyprinodon_variegatus
ENSCCAG00000026775	-	100	44.509	ENSDARG00000044402	nop16	98	44.318	Danio_rerio
ENSCCAG00000026775	-	93	88.125	ENSDNOG00000042890	-	90	88.125	Dasypus_novemcinctus
ENSCCAG00000026775	-	94	85.714	ENSDORG00000008872	Nop16	97	79.661	Dipodomys_ordii
ENSCCAG00000026775	-	92	38.182	ENSEBUG00000011196	nop16	91	38.182	Eptatretus_burgeri
ENSCCAG00000026775	-	97	86.826	ENSEASG00005011988	-	94	86.826	Equus_asinus_asinus
ENSCCAG00000026775	-	97	87.425	ENSECAG00000021354	NOP16	94	87.425	Equus_caballus
ENSCCAG00000026775	-	93	52.795	ENSELUG00000000401	nop16	90	52.795	Esox_lucius
ENSCCAG00000026775	-	97	86.228	ENSFCAG00000025473	-	94	86.228	Felis_catus
ENSCCAG00000026775	-	94	63.804	ENSFALG00000008553	-	91	63.804	Ficedula_albicollis
ENSCCAG00000026775	-	93	86.875	ENSFDAG00000000193	-	90	86.875	Fukomys_damarensis
ENSCCAG00000026775	-	94	50.932	ENSFHEG00000016452	nop16	90	50.932	Fundulus_heteroclitus
ENSCCAG00000026775	-	94	69.939	ENSGALG00000003355	-	91	69.939	Gallus_gallus
ENSCCAG00000026775	-	78	52.239	ENSGAFG00000011616	nop16	72	52.239	Gambusia_affinis
ENSCCAG00000026775	-	93	51.875	ENSGACG00000002618	-	92	51.875	Gasterosteus_aculeatus
ENSCCAG00000026775	-	93	46.914	ENSGACG00000020810	nop16	96	46.914	Gasterosteus_aculeatus
ENSCCAG00000026775	-	93	51.875	ENSGACG00000020819	-	94	51.875	Gasterosteus_aculeatus
ENSCCAG00000026775	-	93	50.000	ENSGACG00000003122	-	89	53.333	Gasterosteus_aculeatus
ENSCCAG00000026775	-	94	50.932	ENSHBUG00000013527	nop16	90	50.932	Haplochromis_burtoni
ENSCCAG00000026775	-	100	80.925	ENSHGLG00000013437	NOP16	90	86.875	Heterocephalus_glaber_female
ENSCCAG00000026775	-	100	80.925	ENSHGLG00100011375	NOP16	90	86.875	Heterocephalus_glaber_male
ENSCCAG00000026775	-	91	49.057	ENSHCOG00000019999	nop16	89	49.057	Hippocampus_comes
ENSCCAG00000026775	-	98	42.941	ENSIPUG00000006682	nop16	96	42.941	Ictalurus_punctatus
ENSCCAG00000026775	-	97	84.615	ENSSTOG00000004869	-	94	84.615	Ictidomys_tridecemlineatus
ENSCCAG00000026775	-	93	87.500	ENSJJAG00000017655	Nop16	90	87.500	Jaculus_jaculus
ENSCCAG00000026775	-	94	51.553	ENSKMAG00000006164	nop16	90	51.553	Kryptolebias_marmoratus
ENSCCAG00000026775	-	91	51.592	ENSLBEG00000018355	nop16	72	51.592	Labrus_bergylta
ENSCCAG00000026775	-	94	61.491	ENSLACG00000014884	nop16	91	61.491	Latimeria_chalumnae
ENSCCAG00000026775	-	94	54.037	ENSLOCG00000012348	nop16	89	54.375	Lepisosteus_oculatus
ENSCCAG00000026775	-	93	87.500	ENSLAFG00000017886	-	90	87.500	Loxodonta_africana
ENSCCAG00000026775	-	94	52.795	ENSMAMG00000021868	nop16	90	53.125	Mastacembelus_armatus
ENSCCAG00000026775	-	94	51.553	ENSMZEG00005012112	nop16	90	51.553	Maylandia_zebra
ENSCCAG00000026775	-	53	65.591	ENSMGAG00000004726	-	91	65.591	Meleagris_gallopavo
ENSCCAG00000026775	-	57	78.788	ENSMAUG00000009852	-	93	78.788	Mesocricetus_auratus
ENSCCAG00000026775	-	91	75.949	ENSMAUG00000015569	-	93	75.949	Mesocricetus_auratus
ENSCCAG00000026775	-	97	84.431	ENSMOCG00000020788	Nop16	94	84.431	Microtus_ochrogaster
ENSCCAG00000026775	-	94	50.932	ENSMMOG00000016054	nop16	93	51.250	Mola_mola
ENSCCAG00000026775	-	94	75.460	ENSMODG00000005214	-	91	75.460	Monodelphis_domestica
ENSCCAG00000026775	-	94	49.689	ENSMALG00000021263	nop16	90	50.000	Monopterus_albus
ENSCCAG00000026775	-	100	80.925	MGP_CAROLIEiJ_G0018538	Nop16	96	82.353	Mus_caroli
ENSCCAG00000026775	-	100	81.503	ENSMUSG00000025869	Nop16	96	82.941	Mus_musculus
ENSCCAG00000026775	-	99	83.626	MGP_PahariEiJ_G0019603	Nop16	96	83.626	Mus_pahari
ENSCCAG00000026775	-	100	80.925	MGP_SPRETEiJ_G0019418	Nop16	96	82.353	Mus_spretus
ENSCCAG00000026775	-	97	86.826	ENSMPUG00000012552	-	94	86.826	Mustela_putorius_furo
ENSCCAG00000026775	-	98	81.765	ENSMPUG00000016964	-	95	81.765	Mustela_putorius_furo
ENSCCAG00000026775	-	98	82.738	ENSMLUG00000003504	-	94	82.738	Myotis_lucifugus
ENSCCAG00000026775	-	100	81.503	ENSNGAG00000018045	Nop16	96	81.503	Nannospalax_galili
ENSCCAG00000026775	-	100	48.295	ENSNBRG00000015181	nop16	100	48.295	Neolamprologus_brichardi
ENSCCAG00000026775	-	93	86.250	ENSODEG00000009586	-	90	86.250	Octodon_degus
ENSCCAG00000026775	-	94	53.416	ENSONIG00000016417	nop16	90	53.416	Oreochromis_niloticus
ENSCCAG00000026775	-	97	84.431	ENSOCUG00000013171	-	94	84.431	Oryctolagus_cuniculus
ENSCCAG00000026775	-	94	51.553	ENSORLG00000026611	nop16	90	51.553	Oryzias_latipes
ENSCCAG00000026775	-	94	52.795	ENSOMEG00000023001	nop16	90	52.795	Oryzias_melastigma
ENSCCAG00000026775	-	98	84.118	ENSOGAG00000000824	-	96	84.118	Otolemur_garnettii
ENSCCAG00000026775	-	93	87.500	ENSOARG00000002165	-	90	87.500	Ovis_aries
ENSCCAG00000026775	-	93	88.750	ENSPPAG00000035473	-	90	88.750	Pan_paniscus
ENSCCAG00000026775	-	97	86.228	ENSPPRG00000016600	-	94	86.228	Panthera_pardus
ENSCCAG00000026775	-	97	86.826	ENSPTIG00000011708	-	94	86.826	Panthera_tigris_altaica
ENSCCAG00000026775	-	93	88.750	ENSPTRG00000017560	NOP16	90	88.750	Pan_troglodytes
ENSCCAG00000026775	-	94	50.932	ENSPKIG00000009587	nop16	90	51.250	Paramormyrops_kingsleyae
ENSCCAG00000026775	-	73	64.567	ENSPSIG00000013546	-	88	64.567	Pelodiscus_sinensis
ENSCCAG00000026775	-	93	52.469	ENSPMGG00000003443	nop16	94	52.469	Periophthalmus_magnuspinnatus
ENSCCAG00000026775	-	97	83.234	ENSPEMG00000020268	Nop16	94	83.234	Peromyscus_maniculatus_bairdii
ENSCCAG00000026775	-	93	77.778	ENSPCIG00000009782	-	90	77.778	Phascolarctos_cinereus
ENSCCAG00000026775	-	94	49.689	ENSPFOG00000010549	nop16	90	49.689	Poecilia_formosa
ENSCCAG00000026775	-	74	50.000	ENSPLAG00000007124	nop16	65	50.000	Poecilia_latipinna
ENSCCAG00000026775	-	94	49.689	ENSPMEG00000008611	nop16	90	49.689	Poecilia_mexicana
ENSCCAG00000026775	-	94	49.068	ENSPREG00000012940	nop16	90	49.068	Poecilia_reticulata
ENSCCAG00000026775	-	93	89.375	ENSPPYG00000016070	-	90	89.375	Pongo_abelii
ENSCCAG00000026775	-	94	51.553	ENSPNYG00000013529	nop16	90	51.553	Pundamilia_nyererei
ENSCCAG00000026775	-	95	43.373	ENSPNAG00000016233	nop16	94	43.373	Pygocentrus_nattereri
ENSCCAG00000026775	-	98	85.294	ENSRNOG00000017284	Nop16	96	85.294	Rattus_norvegicus
ENSCCAG00000026775	-	93	76.398	ENSSHAG00000001724	-	90	76.398	Sarcophilus_harrisii
ENSCCAG00000026775	-	87	50.993	ENSSFOG00015010537	nop16	73	50.307	Scleropages_formosus
ENSCCAG00000026775	-	91	52.229	ENSSDUG00000022349	nop16	88	52.229	Seriola_dumerili
ENSCCAG00000026775	-	91	52.866	ENSSLDG00000025171	nop16	88	52.866	Seriola_lalandi_dorsalis
ENSCCAG00000026775	-	88	73.684	ENSSARG00000006699	-	62	73.684	Sorex_araneus
ENSCCAG00000026775	-	94	68.323	ENSSPUG00000006508	-	90	68.323	Sphenodon_punctatus
ENSCCAG00000026775	-	94	52.795	ENSSPAG00000011772	nop16	90	52.795	Stegastes_partitus
ENSCCAG00000026775	-	98	83.529	ENSSSCG00000029577	-	96	83.529	Sus_scrofa
ENSCCAG00000026775	-	94	66.871	ENSTGUG00000000543	-	91	66.871	Taeniopygia_guttata
ENSCCAG00000026775	-	76	54.198	ENSTRUG00000020255	nop16	90	50.311	Takifugu_rubripes
ENSCCAG00000026775	-	94	50.311	ENSTNIG00000007616	nop16	90	50.311	Tetraodon_nigroviridis
ENSCCAG00000026775	-	97	85.629	ENSUAMG00000005139	-	94	85.629	Ursus_americanus
ENSCCAG00000026775	-	93	89.375	ENSVVUG00000001697	-	88	86.861	Vulpes_vulpes
ENSCCAG00000026775	-	98	51.479	ENSXETG00000022342	nop16	92	52.830	Xenopus_tropicalis
ENSCCAG00000026775	-	94	50.617	ENSXCOG00000018829	nop16	91	50.617	Xiphophorus_couchianus
ENSCCAG00000026775	-	94	50.617	ENSXMAG00000029113	nop16	90	50.617	Xiphophorus_maculatus