EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000026979 (Gene tree)
Gene ID: 108309500
Gene Symbol: RNASEH2B
Alias: AGS2|DLEU8|FLJ11712
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 62620 bases
Position: chrKV389520.1:217420-280039
Accession: 108309500
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000018348	RNase_H2-Ydr279	PF09468.10	1.4e-15	1	1
ENSCCAP00000018334	RNase_H2-Ydr279	PF09468.10	3.1e-15	1	1
ENSCCAP00000018320	RNase_H2-Ydr279	PF09468.10	7.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000035822	RNASEH2B-203	909	-	ENSCCAP00000018348	302 (aa)	-	A0A2K5QR22
ENSCCAT00000035794	RNASEH2B-201	774	XM_017535873	ENSCCAP00000018320	257 (aa)	XP_017391362	A0A2K5QR64
ENSCCAT00000035808	RNASEH2B-202	1386	XM_017535871	ENSCCAP00000018334	309 (aa)	XP_017391360	A0A2K5QR13

Gene Model

Click here to download ENSCCAG00000026979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000026979's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000026979	RNASEH2B	100	96.440	ENSG00000136104	RNASEH2B	99	100.000	Homo_sapiens
ENSCCAG00000026979	RNASEH2B	91	51.812	ENSAPOG00000010496	rnaseh2b	90	51.986	Acanthochromis_polyacanthus
ENSCCAG00000026979	RNASEH2B	95	86.851	ENSAMEG00000012040	RNASEH2B	99	86.486	Ailuropoda_melanoleuca
ENSCCAG00000026979	RNASEH2B	84	46.275	ENSACIG00000021991	rnaseh2b	95	45.918	Amphilophus_citrinellus
ENSCCAG00000026979	RNASEH2B	91	50.725	ENSAOCG00000013398	rnaseh2b	90	50.903	Amphiprion_ocellaris
ENSCCAG00000026979	RNASEH2B	91	50.725	ENSAPEG00000006033	rnaseh2b	90	50.903	Amphiprion_percula
ENSCCAG00000026979	RNASEH2B	89	53.506	ENSATEG00000008370	rnaseh2b	89	53.676	Anabas_testudineus
ENSCCAG00000026979	RNASEH2B	85	65.370	ENSAPLG00000008955	RNASEH2B	99	65.056	Anas_platyrhynchos
ENSCCAG00000026979	RNASEH2B	94	58.947	ENSACAG00000011679	RNASEH2B	97	59.233	Anolis_carolinensis
ENSCCAG00000026979	RNASEH2B	99	96.429	ENSANAG00000020662	RNASEH2B	99	96.429	Aotus_nancymaae
ENSCCAG00000026979	RNASEH2B	88	50.746	ENSACLG00000000467	rnaseh2b	88	50.929	Astatotilapia_calliptera
ENSCCAG00000026979	RNASEH2B	88	54.135	ENSAMXG00000014351	rnaseh2b	88	53.903	Astyanax_mexicanus
ENSCCAG00000026979	RNASEH2B	99	83.224	ENSBTAG00000020149	RNASEH2B	99	82.792	Bos_taurus
ENSCCAG00000026979	RNASEH2B	100	96.358	ENSCJAG00000008585	-	100	96.358	Callithrix_jacchus
ENSCCAG00000026979	RNASEH2B	96	92.308	ENSCJAG00000003822	-	92	93.522	Callithrix_jacchus
ENSCCAG00000026979	RNASEH2B	95	83.618	ENSCAFG00000004295	RNASEH2B	97	82.095	Canis_familiaris
ENSCCAG00000026979	RNASEH2B	98	83.224	ENSCAFG00020000250	RNASEH2B	99	83.224	Canis_lupus_dingo
ENSCCAG00000026979	RNASEH2B	99	84.718	ENSCHIG00000018220	RNASEH2B	99	84.262	Capra_hircus
ENSCCAG00000026979	RNASEH2B	77	74.786	ENSCHIG00000012982	-	84	74.370	Capra_hircus
ENSCCAG00000026979	RNASEH2B	98	76.431	ENSTSYG00000031177	-	98	76.510	Carlito_syrichta
ENSCCAG00000026979	RNASEH2B	94	89.655	ENSTSYG00000009176	-	94	89.655	Carlito_syrichta
ENSCCAG00000026979	RNASEH2B	92	78.397	ENSCAPG00000009978	RNASEH2B	97	78.819	Cavia_aperea
ENSCCAG00000026979	RNASEH2B	96	85.185	ENSCPOG00000032527	RNASEH2B	100	83.658	Cavia_porcellus
ENSCCAG00000026979	RNASEH2B	98	94.932	ENSCATG00000031336	RNASEH2B	84	94.932	Cercocebus_atys
ENSCCAG00000026979	RNASEH2B	95	84.429	ENSCLAG00000003517	RNASEH2B	80	84.932	Chinchilla_lanigera
ENSCCAG00000026979	RNASEH2B	99	94.020	ENSCSAG00000017701	RNASEH2B	91	94.020	Chlorocebus_sabaeus
ENSCCAG00000026979	RNASEH2B	97	70.134	ENSCHOG00000013688	RNASEH2B	97	70.100	Choloepus_hoffmanni
ENSCCAG00000026979	RNASEH2B	95	60.764	ENSCPBG00000008684	RNASEH2B	90	60.690	Chrysemys_picta_bellii
ENSCCAG00000026979	RNASEH2B	94	36.842	ENSCING00000016454	-	96	36.842	Ciona_intestinalis
ENSCCAG00000026979	RNASEH2B	100	94.553	ENSCANG00000041511	-	100	94.553	Colobus_angolensis_palliatus
ENSCCAG00000026979	RNASEH2B	99	82.724	ENSCGRG00001000611	Rnaseh2b	99	82.895	Cricetulus_griseus_chok1gshd
ENSCCAG00000026979	RNASEH2B	99	82.724	ENSCGRG00000006077	Rnaseh2b	99	82.895	Cricetulus_griseus_crigri
ENSCCAG00000026979	RNASEH2B	88	52.256	ENSCSEG00000004910	rnaseh2b	90	52.549	Cynoglossus_semilaevis
ENSCCAG00000026979	RNASEH2B	91	50.909	ENSCVAG00000005212	rnaseh2b	90	50.909	Cyprinodon_variegatus
ENSCCAG00000026979	RNASEH2B	95	50.174	ENSDARG00000005128	rnaseh2b	94	50.000	Danio_rerio
ENSCCAG00000026979	RNASEH2B	99	75.083	ENSDNOG00000034290	-	99	74.754	Dasypus_novemcinctus
ENSCCAG00000026979	RNASEH2B	93	75.175	ENSDNOG00000049666	-	93	75.175	Dasypus_novemcinctus
ENSCCAG00000026979	RNASEH2B	99	85.714	ENSDORG00000010708	Rnaseh2b	99	85.714	Dipodomys_ordii
ENSCCAG00000026979	RNASEH2B	94	30.189	FBgn0030507	CG11164	91	30.189	Drosophila_melanogaster
ENSCCAG00000026979	RNASEH2B	84	39.844	ENSEBUG00000005965	rnaseh2b	97	40.625	Eptatretus_burgeri
ENSCCAG00000026979	RNASEH2B	99	88.636	ENSEASG00005017323	RNASEH2B	99	88.636	Equus_asinus_asinus
ENSCCAG00000026979	RNASEH2B	99	88.312	ENSECAG00000014262	RNASEH2B	99	88.312	Equus_caballus
ENSCCAG00000026979	RNASEH2B	94	49.306	ENSELUG00000019560	rnaseh2b	93	49.306	Esox_lucius
ENSCCAG00000026979	RNASEH2B	97	87.329	ENSFCAG00000014257	RNASEH2B	92	87.329	Felis_catus
ENSCCAG00000026979	RNASEH2B	91	61.011	ENSFALG00000008435	RNASEH2B	95	60.932	Ficedula_albicollis
ENSCCAG00000026979	RNASEH2B	93	86.014	ENSFDAG00000009920	RNASEH2B	99	86.014	Fukomys_damarensis
ENSCCAG00000026979	RNASEH2B	88	53.008	ENSFHEG00000012160	rnaseh2b	87	53.008	Fundulus_heteroclitus
ENSCCAG00000026979	RNASEH2B	84	50.000	ENSGMOG00000016830	rnaseh2b	91	50.190	Gadus_morhua
ENSCCAG00000026979	RNASEH2B	93	61.620	ENSGALG00000017015	RNASEH2B	96	61.486	Gallus_gallus
ENSCCAG00000026979	RNASEH2B	88	52.632	ENSGAFG00000021222	rnaseh2b	87	52.632	Gambusia_affinis
ENSCCAG00000026979	RNASEH2B	91	49.645	ENSGACG00000002821	rnaseh2b	90	49.823	Gasterosteus_aculeatus
ENSCCAG00000026979	RNASEH2B	89	63.197	ENSGAGG00000014722	RNASEH2B	97	63.100	Gopherus_agassizii
ENSCCAG00000026979	RNASEH2B	100	95.720	ENSGGOG00000001044	RNASEH2B	100	95.720	Gorilla_gorilla
ENSCCAG00000026979	RNASEH2B	96	43.145	ENSHBUG00000006049	rnaseh2b	89	51.751	Haplochromis_burtoni
ENSCCAG00000026979	RNASEH2B	93	87.857	ENSHGLG00100015953	RNASEH2B	98	87.805	Heterocephalus_glaber_male
ENSCCAG00000026979	RNASEH2B	88	48.889	ENSHCOG00000003318	rnaseh2b	86	52.049	Hippocampus_comes
ENSCCAG00000026979	RNASEH2B	88	52.809	ENSIPUG00000023815	rnaseh2b	88	52.768	Ictalurus_punctatus
ENSCCAG00000026979	RNASEH2B	92	88.530	ENSSTOG00000015126	RNASEH2B	98	88.421	Ictidomys_tridecemlineatus
ENSCCAG00000026979	RNASEH2B	95	85.017	ENSJJAG00000013335	Rnaseh2b	97	84.483	Jaculus_jaculus
ENSCCAG00000026979	RNASEH2B	91	52.000	ENSKMAG00000002198	rnaseh2b	90	52.000	Kryptolebias_marmoratus
ENSCCAG00000026979	RNASEH2B	91	53.623	ENSLBEG00000019331	rnaseh2b	90	53.791	Labrus_bergylta
ENSCCAG00000026979	RNASEH2B	69	61.137	ENSLACG00000010782	RNASEH2B	90	61.435	Latimeria_chalumnae
ENSCCAG00000026979	RNASEH2B	95	54.167	ENSLOCG00000009296	rnaseh2b	94	54.138	Lepisosteus_oculatus
ENSCCAG00000026979	RNASEH2B	95	83.333	ENSLAFG00000030158	RNASEH2B	94	83.219	Loxodonta_africana
ENSCCAG00000026979	RNASEH2B	100	95.146	ENSMFAG00000038464	-	100	95.146	Macaca_fascicularis
ENSCCAG00000026979	RNASEH2B	100	94.163	ENSMMUG00000021746	RNASEH2B	100	94.163	Macaca_mulatta
ENSCCAG00000026979	RNASEH2B	100	95.146	ENSMNEG00000030580	RNASEH2B	100	95.146	Macaca_nemestrina
ENSCCAG00000026979	RNASEH2B	100	95.331	ENSMLEG00000043911	-	100	95.331	Mandrillus_leucophaeus
ENSCCAG00000026979	RNASEH2B	88	53.558	ENSMAMG00000017109	rnaseh2b	87	53.731	Mastacembelus_armatus
ENSCCAG00000026979	RNASEH2B	86	50.763	ENSMZEG00005021926	rnaseh2b	87	50.566	Maylandia_zebra
ENSCCAG00000026979	RNASEH2B	89	61.397	ENSMGAG00000015025	RNASEH2B	99	61.268	Meleagris_gallopavo
ENSCCAG00000026979	RNASEH2B	99	80.731	ENSMAUG00000016520	Rnaseh2b	99	80.921	Mesocricetus_auratus
ENSCCAG00000026979	RNASEH2B	99	90.033	ENSMICG00000000528	RNASEH2B	99	89.935	Microcebus_murinus
ENSCCAG00000026979	RNASEH2B	88	52.809	ENSMMOG00000019799	rnaseh2b	93	52.985	Mola_mola
ENSCCAG00000026979	RNASEH2B	96	66.096	ENSMODG00000010775	RNASEH2B	96	65.986	Monodelphis_domestica
ENSCCAG00000026979	RNASEH2B	90	51.460	ENSMALG00000004463	rnaseh2b	90	51.636	Monopterus_albus
ENSCCAG00000026979	RNASEH2B	99	69.868	MGP_CAROLIEiJ_G0019389	Rnaseh2b	99	70.492	Mus_caroli
ENSCCAG00000026979	RNASEH2B	99	80.795	ENSMUSG00000021932	Rnaseh2b	99	81.311	Mus_musculus
ENSCCAG00000026979	RNASEH2B	99	64.912	MGP_PahariEiJ_G0030407	-	99	64.928	Mus_pahari
ENSCCAG00000026979	RNASEH2B	92	86.017	ENSMPUG00000018010	RNASEH2B	98	86.017	Mustela_putorius_furo
ENSCCAG00000026979	RNASEH2B	100	87.055	ENSMLUG00000004065	-	100	87.055	Myotis_lucifugus
ENSCCAG00000026979	RNASEH2B	89	50.186	ENSNBRG00000003253	rnaseh2b	89	50.370	Neolamprologus_brichardi
ENSCCAG00000026979	RNASEH2B	100	94.942	ENSNLEG00000003804	RNASEH2B	100	94.942	Nomascus_leucogenys
ENSCCAG00000026979	RNASEH2B	92	67.260	ENSMEUG00000003665	RNASEH2B	97	67.138	Notamacropus_eugenii
ENSCCAG00000026979	RNASEH2B	80	64.490	ENSOPRG00000003695	-	78	64.372	Ochotona_princeps
ENSCCAG00000026979	RNASEH2B	99	83.442	ENSODEG00000006793	-	99	83.442	Octodon_degus
ENSCCAG00000026979	RNASEH2B	84	76.037	ENSODEG00000005412	-	95	77.917	Octodon_degus
ENSCCAG00000026979	RNASEH2B	88	48.529	ENSONIG00000006657	rnaseh2b	88	50.186	Oreochromis_niloticus
ENSCCAG00000026979	RNASEH2B	92	66.197	ENSOANG00000015537	RNASEH2B	99	66.434	Ornithorhynchus_anatinus
ENSCCAG00000026979	RNASEH2B	99	85.050	ENSOCUG00000008904	RNASEH2B	96	84.918	Oryctolagus_cuniculus
ENSCCAG00000026979	RNASEH2B	94	50.350	ENSORLG00000011850	rnaseh2b	95	50.347	Oryzias_latipes
ENSCCAG00000026979	RNASEH2B	94	51.049	ENSORLG00020012081	rnaseh2b	95	51.042	Oryzias_latipes_hni
ENSCCAG00000026979	RNASEH2B	94	51.049	ENSORLG00015015468	rnaseh2b	95	51.042	Oryzias_latipes_hsok
ENSCCAG00000026979	RNASEH2B	94	49.650	ENSOMEG00000012441	rnaseh2b	95	49.653	Oryzias_melastigma
ENSCCAG00000026979	RNASEH2B	95	84.880	ENSOGAG00000016486	RNASEH2B	99	84.848	Otolemur_garnettii
ENSCCAG00000026979	RNASEH2B	94	84.912	ENSOARG00000008701	RNASEH2B	98	84.429	Ovis_aries
ENSCCAG00000026979	RNASEH2B	90	94.891	ENSPPAG00000026374	RNASEH2B	100	95.595	Pan_paniscus
ENSCCAG00000026979	RNASEH2B	98	86.047	ENSPPRG00000012450	RNASEH2B	99	86.230	Panthera_pardus
ENSCCAG00000026979	RNASEH2B	90	88.000	ENSPTIG00000013918	RNASEH2B	99	88.172	Panthera_tigris_altaica
ENSCCAG00000026979	RNASEH2B	100	96.498	ENSPTRG00000005886	RNASEH2B	100	96.498	Pan_troglodytes
ENSCCAG00000026979	RNASEH2B	100	94.553	ENSPANG00000022424	-	100	94.553	Papio_anubis
ENSCCAG00000026979	RNASEH2B	99	47.020	ENSPKIG00000013386	rnaseh2b	99	47.039	Paramormyrops_kingsleyae
ENSCCAG00000026979	RNASEH2B	73	57.672	ENSPSIG00000002224	RNASEH2B	86	58.602	Pelodiscus_sinensis
ENSCCAG00000026979	RNASEH2B	66	53.000	ENSPMGG00000010299	rnaseh2b	98	53.465	Periophthalmus_magnuspinnatus
ENSCCAG00000026979	RNASEH2B	99	83.056	ENSPEMG00000019721	Rnaseh2b	99	83.224	Peromyscus_maniculatus_bairdii
ENSCCAG00000026979	RNASEH2B	93	60.854	ENSPCIG00000014535	-	94	60.854	Phascolarctos_cinereus
ENSCCAG00000026979	RNASEH2B	88	53.358	ENSPFOG00000016722	rnaseh2b	87	53.358	Poecilia_formosa
ENSCCAG00000026979	RNASEH2B	88	53.759	ENSPLAG00000011755	rnaseh2b	87	53.759	Poecilia_latipinna
ENSCCAG00000026979	RNASEH2B	88	53.759	ENSPMEG00000002721	rnaseh2b	87	53.759	Poecilia_mexicana
ENSCCAG00000026979	RNASEH2B	88	53.759	ENSPREG00000007737	rnaseh2b	87	53.759	Poecilia_reticulata
ENSCCAG00000026979	RNASEH2B	100	94.872	ENSPPYG00000005378	RNASEH2B	100	93.269	Pongo_abelii
ENSCCAG00000026979	RNASEH2B	99	91.391	ENSPCOG00000026623	RNASEH2B	99	91.262	Propithecus_coquereli
ENSCCAG00000026979	RNASEH2B	88	86.283	ENSPVAG00000000508	RNASEH2B	99	82.836	Pteropus_vampyrus
ENSCCAG00000026979	RNASEH2B	100	41.985	ENSPNYG00000013552	rnaseh2b	89	51.751	Pundamilia_nyererei
ENSCCAG00000026979	RNASEH2B	88	51.311	ENSPNAG00000024825	rnaseh2b	88	51.111	Pygocentrus_nattereri
ENSCCAG00000026979	RNASEH2B	99	81.395	ENSRNOG00000009192	Rnaseh2b	99	81.579	Rattus_norvegicus
ENSCCAG00000026979	RNASEH2B	100	94.822	ENSRBIG00000028928	-	100	94.822	Rhinopithecus_bieti
ENSCCAG00000026979	RNASEH2B	97	80.546	ENSRBIG00000036017	-	96	80.887	Rhinopithecus_bieti
ENSCCAG00000026979	RNASEH2B	96	75.203	ENSRROG00000044915	-	92	75.709	Rhinopithecus_roxellana
ENSCCAG00000026979	RNASEH2B	100	94.822	ENSRROG00000018808	-	100	94.822	Rhinopithecus_roxellana
ENSCCAG00000026979	RNASEH2B	100	96.689	ENSSBOG00000008081	RNASEH2B	100	96.416	Saimiri_boliviensis_boliviensis
ENSCCAG00000026979	RNASEH2B	96	66.781	ENSSHAG00000016190	RNASEH2B	96	66.667	Sarcophilus_harrisii
ENSCCAG00000026979	RNASEH2B	91	50.903	ENSSFOG00015010190	rnaseh2b	91	50.896	Scleropages_formosus
ENSCCAG00000026979	RNASEH2B	88	52.060	ENSSMAG00000001546	rnaseh2b	87	52.239	Scophthalmus_maximus
ENSCCAG00000026979	RNASEH2B	91	52.364	ENSSDUG00000007567	rnaseh2b	90	52.364	Seriola_dumerili
ENSCCAG00000026979	RNASEH2B	91	52.536	ENSSLDG00000012485	rnaseh2b	92	51.087	Seriola_lalandi_dorsalis
ENSCCAG00000026979	RNASEH2B	85	61.923	ENSSPUG00000006745	-	94	61.923	Sphenodon_punctatus
ENSCCAG00000026979	RNASEH2B	91	51.812	ENSSPAG00000020926	rnaseh2b	90	51.986	Stegastes_partitus
ENSCCAG00000026979	RNASEH2B	98	84.190	ENSSSCG00000024385	RNASEH2B	99	87.050	Sus_scrofa
ENSCCAG00000026979	RNASEH2B	88	62.921	ENSTGUG00000012104	RNASEH2B	99	62.825	Taeniopygia_guttata
ENSCCAG00000026979	RNASEH2B	88	54.135	ENSTRUG00000015098	rnaseh2b	87	54.104	Takifugu_rubripes
ENSCCAG00000026979	RNASEH2B	88	53.160	ENSTNIG00000013861	rnaseh2b	87	53.333	Tetraodon_nigroviridis
ENSCCAG00000026979	RNASEH2B	93	79.931	ENSTTRG00000010761	RNASEH2B	99	76.129	Tursiops_truncatus
ENSCCAG00000026979	RNASEH2B	93	89.643	ENSUAMG00000022849	RNASEH2B	99	88.849	Ursus_americanus
ENSCCAG00000026979	RNASEH2B	93	88.571	ENSUMAG00000018556	RNASEH2B	99	87.770	Ursus_maritimus
ENSCCAG00000026979	RNASEH2B	93	88.153	ENSVPAG00000005679	RNASEH2B	99	88.153	Vicugna_pacos
ENSCCAG00000026979	RNASEH2B	98	81.818	ENSVVUG00000024015	RNASEH2B	90	81.728	Vulpes_vulpes
ENSCCAG00000026979	RNASEH2B	96	57.732	ENSXETG00000020720	rnaseh2b	95	57.679	Xenopus_tropicalis
ENSCCAG00000026979	RNASEH2B	88	52.434	ENSXCOG00000018732	rnaseh2b	89	52.091	Xiphophorus_couchianus
ENSCCAG00000026979	RNASEH2B	88	53.383	ENSXMAG00000022554	rnaseh2b	87	53.383	Xiphophorus_maculatus