EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000027080 (Gene tree)
Gene ID: 108314391
Gene Symbol: SHQ1
Alias: -
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 100151 bases
Position: chrKV389578.1:1435050-1535200
Accession: 108314391
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000018476	SHQ1	PF04925.15	3.8e-69	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000035951	SHQ1-201	1593	XM_017543298	ENSCCAP00000018476	530 (aa)	XP_017398787	A0A2K5QRF7

Gene Model

Click here to download ENSCCAG00000027080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000027080's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000027080	SHQ1	99	68.393	ENSCCAG00000036087	-	99	68.214

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000027080	SHQ1	100	81.976	ENSG00000144736	SHQ1	96	97.917	Homo_sapiens
ENSCCAG00000027080	SHQ1	73	52.632	ENSAPOG00000000397	shq1	70	52.632	Acanthochromis_polyacanthus
ENSCCAG00000027080	SHQ1	100	72.097	ENSAMEG00000015140	SHQ1	100	73.830	Ailuropoda_melanoleuca
ENSCCAG00000027080	SHQ1	73	54.273	ENSACIG00000021249	shq1	67	54.126	Amphilophus_citrinellus
ENSCCAG00000027080	SHQ1	73	53.776	ENSAOCG00000023311	shq1	70	53.776	Amphiprion_ocellaris
ENSCCAG00000027080	SHQ1	73	53.089	ENSAPEG00000021686	shq1	70	53.089	Amphiprion_percula
ENSCCAG00000027080	SHQ1	73	53.318	ENSATEG00000008475	shq1	67	52.404	Anabas_testudineus
ENSCCAG00000027080	SHQ1	87	57.594	ENSAPLG00000013926	SHQ1	88	60.938	Anas_platyrhynchos
ENSCCAG00000027080	SHQ1	97	54.982	ENSACAG00000014809	SHQ1	83	56.661	Anolis_carolinensis
ENSCCAG00000027080	SHQ1	100	85.366	ENSANAG00000029241	SHQ1	100	85.366	Aotus_nancymaae
ENSCCAG00000027080	SHQ1	99	65.946	ENSANAG00000030500	-	99	65.586	Aotus_nancymaae
ENSCCAG00000027080	SHQ1	75	51.345	ENSACLG00000023077	shq1	69	49.438	Astatotilapia_calliptera
ENSCCAG00000027080	SHQ1	73	45.370	ENSAMXG00000043822	shq1	71	46.377	Astyanax_mexicanus
ENSCCAG00000027080	SHQ1	100	70.812	ENSBTAG00000005436	SHQ1	100	71.503	Bos_taurus
ENSCCAG00000027080	SHQ1	57	34.936	WBGene00021655	Y48A5A.1	92	31.175	Caenorhabditis_elegans
ENSCCAG00000027080	SHQ1	100	84.028	ENSCJAG00000015131	SHQ1	100	85.069	Callithrix_jacchus
ENSCCAG00000027080	SHQ1	100	71.404	ENSCAFG00000006434	SHQ1	99	73.137	Canis_familiaris
ENSCCAG00000027080	SHQ1	100	71.231	ENSCAFG00020016743	SHQ1	99	72.964	Canis_lupus_dingo
ENSCCAG00000027080	SHQ1	100	70.466	ENSCHIG00000012271	SHQ1	91	72.021	Capra_hircus
ENSCCAG00000027080	SHQ1	98	71.353	ENSTSYG00000014439	SHQ1	99	72.583	Carlito_syrichta
ENSCCAG00000027080	SHQ1	55	92.105	ENSCAPG00000009343	SHQ1	89	65.000	Cavia_aperea
ENSCCAG00000027080	SHQ1	98	67.581	ENSCPOG00000011443	SHQ1	98	67.753	Cavia_porcellus
ENSCCAG00000027080	SHQ1	100	81.109	ENSCATG00000041238	SHQ1	100	82.149	Cercocebus_atys
ENSCCAG00000027080	SHQ1	97	66.667	ENSCLAG00000004206	SHQ1	99	66.495	Chinchilla_lanigera
ENSCCAG00000027080	SHQ1	88	88.462	ENSCSAG00000011514	SHQ1	98	87.243	Chlorocebus_sabaeus
ENSCCAG00000027080	SHQ1	98	57.042	ENSCPBG00000006441	SHQ1	93	57.394	Chrysemys_picta_bellii
ENSCCAG00000027080	SHQ1	66	38.677	ENSCING00000008013	-	85	38.677	Ciona_intestinalis
ENSCCAG00000027080	SHQ1	66	38.035	ENSCSAVG00000002332	-	88	38.035	Ciona_savignyi
ENSCCAG00000027080	SHQ1	99	80.944	ENSCANG00000039295	SHQ1	100	80.944	Colobus_angolensis_palliatus
ENSCCAG00000027080	SHQ1	100	65.976	ENSCGRG00001012583	Shq1	100	65.285	Cricetulus_griseus_chok1gshd
ENSCCAG00000027080	SHQ1	100	65.976	ENSCGRG00000009849	Shq1	100	65.285	Cricetulus_griseus_crigri
ENSCCAG00000027080	SHQ1	70	52.392	ENSCSEG00000007829	shq1	66	52.530	Cynoglossus_semilaevis
ENSCCAG00000027080	SHQ1	73	52.283	ENSCVAG00000020049	shq1	98	45.302	Cyprinodon_variegatus
ENSCCAG00000027080	SHQ1	73	49.539	ENSDARG00000058522	shq1	69	48.792	Danio_rerio
ENSCCAG00000027080	SHQ1	100	72.145	ENSDNOG00000033937	SHQ1	100	70.934	Dasypus_novemcinctus
ENSCCAG00000027080	SHQ1	99	57.712	ENSETEG00000005766	SHQ1	99	57.366	Echinops_telfairi
ENSCCAG00000027080	SHQ1	66	46.814	ENSEBUG00000005445	shq1	69	48.693	Eptatretus_burgeri
ENSCCAG00000027080	SHQ1	100	75.563	ENSEASG00005002237	SHQ1	100	76.776	Equus_asinus_asinus
ENSCCAG00000027080	SHQ1	97	76.607	ENSECAG00000015673	SHQ1	95	77.857	Equus_caballus
ENSCCAG00000027080	SHQ1	99	68.870	ENSEEUG00000010568	SHQ1	99	70.435	Erinaceus_europaeus
ENSCCAG00000027080	SHQ1	69	50.481	ENSELUG00000003476	shq1	81	48.964	Esox_lucius
ENSCCAG00000027080	SHQ1	100	72.964	ENSFCAG00000012781	SHQ1	100	72.964	Felis_catus
ENSCCAG00000027080	SHQ1	96	56.912	ENSFALG00000013428	SHQ1	91	56.708	Ficedula_albicollis
ENSCCAG00000027080	SHQ1	99	65.546	ENSFDAG00000005595	SHQ1	91	65.378	Fukomys_damarensis
ENSCCAG00000027080	SHQ1	73	55.023	ENSFHEG00000017552	shq1	70	54.676	Fundulus_heteroclitus
ENSCCAG00000027080	SHQ1	66	49.373	ENSGMOG00000007350	shq1	100	49.373	Gadus_morhua
ENSCCAG00000027080	SHQ1	96	56.216	ENSGALG00000007798	SHQ1	91	56.216	Gallus_gallus
ENSCCAG00000027080	SHQ1	60	72.917	ENSGACG00000011797	shq1	98	50.758	Gasterosteus_aculeatus
ENSCCAG00000027080	SHQ1	100	81.456	ENSGGOG00000034818	SHQ1	100	82.322	Gorilla_gorilla
ENSCCAG00000027080	SHQ1	75	51.121	ENSHBUG00000010857	shq1	68	52.885	Haplochromis_burtoni
ENSCCAG00000027080	SHQ1	98	65.866	ENSHGLG00000003637	SHQ1	89	66.151	Heterocephalus_glaber_female
ENSCCAG00000027080	SHQ1	98	65.921	ENSHGLG00100011957	SHQ1	89	66.207	Heterocephalus_glaber_male
ENSCCAG00000027080	SHQ1	94	45.772	ENSHCOG00000010799	shq1	74	51.802	Hippocampus_comes
ENSCCAG00000027080	SHQ1	73	49.203	ENSIPUG00000001247	shq1	70	49.282	Ictalurus_punctatus
ENSCCAG00000027080	SHQ1	98	65.187	ENSSTOG00000010043	SHQ1	99	64.413	Ictidomys_tridecemlineatus
ENSCCAG00000027080	SHQ1	100	65.858	ENSJJAG00000017611	Shq1	100	65.338	Jaculus_jaculus
ENSCCAG00000027080	SHQ1	96	45.893	ENSKMAG00000004457	shq1	91	46.881	Kryptolebias_marmoratus
ENSCCAG00000027080	SHQ1	98	51.916	ENSLACG00000014243	SHQ1	86	52.091	Latimeria_chalumnae
ENSCCAG00000027080	SHQ1	99	49.742	ENSLOCG00000009970	shq1	99	49.391	Lepisosteus_oculatus
ENSCCAG00000027080	SHQ1	100	80.936	ENSMFAG00000039148	SHQ1	100	81.976	Macaca_fascicularis
ENSCCAG00000027080	SHQ1	99	65.288	ENSMFAG00000037396	-	99	66.367	Macaca_fascicularis
ENSCCAG00000027080	SHQ1	99	65.108	ENSMMUG00000021761	-	99	66.187	Macaca_mulatta
ENSCCAG00000027080	SHQ1	88	88.248	ENSMMUG00000009571	SHQ1	94	82.095	Macaca_mulatta
ENSCCAG00000027080	SHQ1	100	80.936	ENSMNEG00000032667	SHQ1	100	81.976	Macaca_nemestrina
ENSCCAG00000027080	SHQ1	100	81.109	ENSMLEG00000038493	SHQ1	100	81.976	Mandrillus_leucophaeus
ENSCCAG00000027080	SHQ1	63	70.833	ENSMAMG00000023432	shq1	64	52.246	Mastacembelus_armatus
ENSCCAG00000027080	SHQ1	75	51.345	ENSMZEG00005008649	shq1	68	52.644	Maylandia_zebra
ENSCCAG00000027080	SHQ1	96	56.475	ENSMGAG00000009640	SHQ1	91	55.935	Meleagris_gallopavo
ENSCCAG00000027080	SHQ1	100	66.090	ENSMAUG00000022030	Shq1	100	65.917	Mesocricetus_auratus
ENSCCAG00000027080	SHQ1	100	72.137	ENSMICG00000009224	SHQ1	100	73.504	Microcebus_murinus
ENSCCAG00000027080	SHQ1	98	65.785	ENSMOCG00000017836	Shq1	98	64.223	Microtus_ochrogaster
ENSCCAG00000027080	SHQ1	73	53.472	ENSMMOG00000010569	shq1	69	53.398	Mola_mola
ENSCCAG00000027080	SHQ1	95	56.000	ENSMODG00000003926	SHQ1	98	56.000	Monodelphis_domestica
ENSCCAG00000027080	SHQ1	99	45.840	ENSMALG00000008870	shq1	68	53.717	Monopterus_albus
ENSCCAG00000027080	SHQ1	98	63.668	MGP_CAROLIEiJ_G0028689	Shq1	98	65.256	Mus_caroli
ENSCCAG00000027080	SHQ1	98	64.727	ENSMUSG00000035378	Shq1	98	65.608	Mus_musculus
ENSCCAG00000027080	SHQ1	98	65.608	MGP_PahariEiJ_G0022440	Shq1	98	65.674	Mus_pahari
ENSCCAG00000027080	SHQ1	98	64.198	MGP_SPRETEiJ_G0029717	Shq1	98	65.079	Mus_spretus
ENSCCAG00000027080	SHQ1	100	73.310	ENSMPUG00000017006	SHQ1	98	74.003	Mustela_putorius_furo
ENSCCAG00000027080	SHQ1	80	75.117	ENSMLUG00000013539	SHQ1	84	74.833	Myotis_lucifugus
ENSCCAG00000027080	SHQ1	98	58.554	ENSNGAG00000023317	Shq1	99	58.377	Nannospalax_galili
ENSCCAG00000027080	SHQ1	59	58.730	ENSNBRG00000024004	shq1	55	60.274	Neolamprologus_brichardi
ENSCCAG00000027080	SHQ1	100	83.362	ENSNLEG00000002731	SHQ1	100	82.149	Nomascus_leucogenys
ENSCCAG00000027080	SHQ1	79	82.979	ENSMEUG00000009350	-	78	82.979	Notamacropus_eugenii
ENSCCAG00000027080	SHQ1	98	63.845	ENSODEG00000009192	SHQ1	99	64.021	Octodon_degus
ENSCCAG00000027080	SHQ1	75	52.584	ENSONIG00000020264	shq1	68	52.885	Oreochromis_niloticus
ENSCCAG00000027080	SHQ1	100	67.637	ENSOCUG00000016695	SHQ1	100	68.664	Oryctolagus_cuniculus
ENSCCAG00000027080	SHQ1	73	50.463	ENSORLG00000023538	shq1	80	50.000	Oryzias_latipes
ENSCCAG00000027080	SHQ1	73	51.157	ENSORLG00020003697	shq1	79	50.673	Oryzias_latipes_hni
ENSCCAG00000027080	SHQ1	73	51.157	ENSORLG00015021040	shq1	74	50.843	Oryzias_latipes_hsok
ENSCCAG00000027080	SHQ1	73	51.852	ENSOMEG00000001225	shq1	74	51.325	Oryzias_melastigma
ENSCCAG00000027080	SHQ1	98	74.301	ENSOGAG00000003898	SHQ1	99	74.650	Otolemur_garnettii
ENSCCAG00000027080	SHQ1	100	69.521	ENSOARG00000009547	SHQ1	100	71.062	Ovis_aries
ENSCCAG00000027080	SHQ1	100	81.802	ENSPPAG00000027714	SHQ1	100	82.669	Pan_paniscus
ENSCCAG00000027080	SHQ1	99	73.383	ENSPPAG00000043263	-	99	72.171	Pan_paniscus
ENSCCAG00000027080	SHQ1	100	73.310	ENSPPRG00000004769	SHQ1	100	73.310	Panthera_pardus
ENSCCAG00000027080	SHQ1	100	72.954	ENSPTIG00000011478	SHQ1	100	72.954	Panthera_tigris_altaica
ENSCCAG00000027080	SHQ1	100	81.976	ENSPTRG00000015106	SHQ1	100	82.842	Pan_troglodytes
ENSCCAG00000027080	SHQ1	99	72.458	ENSPTRG00000048303	-	99	71.243	Pan_troglodytes
ENSCCAG00000027080	SHQ1	100	79.203	ENSPANG00000002881	SHQ1	100	81.456	Papio_anubis
ENSCCAG00000027080	SHQ1	72	50.117	ENSPKIG00000021517	shq1	72	50.483	Paramormyrops_kingsleyae
ENSCCAG00000027080	SHQ1	89	85.417	ENSPSIG00000005536	SHQ1	91	58.484	Pelodiscus_sinensis
ENSCCAG00000027080	SHQ1	75	50.901	ENSPMGG00000008838	shq1	75	51.345	Periophthalmus_magnuspinnatus
ENSCCAG00000027080	SHQ1	98	68.254	ENSPEMG00000000251	Shq1	98	67.549	Peromyscus_maniculatus_bairdii
ENSCCAG00000027080	SHQ1	68	77.083	ENSPMAG00000005372	shq1	99	47.098	Petromyzon_marinus
ENSCCAG00000027080	SHQ1	73	52.620	ENSPFOG00000003118	shq1	97	46.679	Poecilia_formosa
ENSCCAG00000027080	SHQ1	58	59.223	ENSPMEG00000011076	shq1	95	50.743	Poecilia_mexicana
ENSCCAG00000027080	SHQ1	58	58.361	ENSPREG00000000591	shq1	77	49.420	Poecilia_reticulata
ENSCCAG00000027080	SHQ1	100	82.496	ENSPPYG00000013717	SHQ1	100	82.322	Pongo_abelii
ENSCCAG00000027080	SHQ1	96	72.924	ENSPCAG00000009035	SHQ1	99	71.429	Procavia_capensis
ENSCCAG00000027080	SHQ1	100	73.459	ENSPCOG00000008415	SHQ1	100	76.027	Propithecus_coquereli
ENSCCAG00000027080	SHQ1	100	74.132	ENSPVAG00000017392	SHQ1	100	75.694	Pteropus_vampyrus
ENSCCAG00000027080	SHQ1	75	51.345	ENSPNYG00000003878	shq1	68	52.885	Pundamilia_nyererei
ENSCCAG00000027080	SHQ1	73	49.078	ENSPNAG00000026840	shq1	67	48.681	Pygocentrus_nattereri
ENSCCAG00000027080	SHQ1	98	61.681	ENSRNOG00000005433	Shq1	96	65.873	Rattus_norvegicus
ENSCCAG00000027080	SHQ1	99	76.265	ENSRBIG00000026280	SHQ1	100	77.138	Rhinopithecus_bieti
ENSCCAG00000027080	SHQ1	99	80.769	ENSRROG00000034126	SHQ1	100	80.769	Rhinopithecus_roxellana
ENSCCAG00000027080	SHQ1	100	89.346	ENSSBOG00000021038	SHQ1	100	89.720	Saimiri_boliviensis_boliviensis
ENSCCAG00000027080	SHQ1	97	56.915	ENSSHAG00000015077	SHQ1	99	57.067	Sarcophilus_harrisii
ENSCCAG00000027080	SHQ1	75	54.586	ENSSFOG00015016241	shq1	91	47.415	Scleropages_formosus
ENSCCAG00000027080	SHQ1	75	54.464	ENSSMAG00000016151	shq1	72	55.305	Scophthalmus_maximus
ENSCCAG00000027080	SHQ1	69	53.606	ENSSDUG00000011986	shq1	67	54.087	Seriola_dumerili
ENSCCAG00000027080	SHQ1	69	53.902	ENSSLDG00000013908	shq1	67	53.902	Seriola_lalandi_dorsalis
ENSCCAG00000027080	SHQ1	96	58.559	ENSSARG00000007119	SHQ1	100	55.478	Sorex_araneus
ENSCCAG00000027080	SHQ1	80	61.939	ENSSPUG00000011526	-	81	62.014	Sphenodon_punctatus
ENSCCAG00000027080	SHQ1	99	69.792	ENSSSCG00000011518	SHQ1	99	71.528	Sus_scrofa
ENSCCAG00000027080	SHQ1	96	56.228	ENSTGUG00000009933	SHQ1	97	53.451	Taeniopygia_guttata
ENSCCAG00000027080	SHQ1	69	48.434	ENSTRUG00000009446	shq1	75	50.225	Takifugu_rubripes
ENSCCAG00000027080	SHQ1	63	68.750	ENSTNIG00000007354	shq1	90	47.857	Tetraodon_nigroviridis
ENSCCAG00000027080	SHQ1	87	93.617	ENSTBEG00000011295	SHQ1	80	93.617	Tupaia_belangeri
ENSCCAG00000027080	SHQ1	100	70.069	ENSTTRG00000005320	SHQ1	100	71.799	Tursiops_truncatus
ENSCCAG00000027080	SHQ1	98	70.848	ENSUMAG00000024031	SHQ1	98	72.615	Ursus_maritimus
ENSCCAG00000027080	SHQ1	84	79.195	ENSVPAG00000004880	SHQ1	88	78.465	Vicugna_pacos
ENSCCAG00000027080	SHQ1	100	71.577	ENSVVUG00000013906	SHQ1	99	73.137	Vulpes_vulpes
ENSCCAG00000027080	SHQ1	75	56.916	ENSXETG00000032215	shq1	72	57.596	Xenopus_tropicalis