EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000027215 (Gene tree)
Gene ID: 108308629
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 43897 bases
Position: chrKV389430.1:9026517-9070413
Accession: 108308629
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000018830	ResIII	PF04851.15	9e-11	1	1
ENSCCAP00000018807	ResIII	PF04851.15	9.8e-11	1	1
ENSCCAP00000018830	DEAD	PF00270.29	5.2e-06	1	1
ENSCCAP00000018807	DEAD	PF00270.29	5.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000036315	SMARCA5-203	1134	-	ENSCCAP00000018838	377 (aa)	-	A0A2K5QSG4
ENSCCAT00000036307	SMARCA5-202	2994	-	ENSCCAP00000018830	997 (aa)	-	A0A2K5QSM6
ENSCCAT00000036284	SMARCA5-201	5971	XM_017534510	ENSCCAP00000018807	1052 (aa)	XP_017389999	A0A2K5QSD3

Gene Model

Click here to download ENSCCAG00000027215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000027215's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000027215	SMARCA5	99	82.204	ENSCCAG00000030817	SMARCA1	93	82.204
ENSCCAG00000027215	SMARCA5	57	39.755	ENSCCAG00000036079	CHD1L	86	43.750
ENSCCAG00000027215	SMARCA5	52	42.259	ENSCCAG00000036828	CHD6	72	41.162

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000027215	SMARCA5	100	99.525	ENSG00000153147	SMARCA5	100	99.525	Homo_sapiens
ENSCCAG00000027215	SMARCA5	100	98.859	ENSAMEG00000009585	SMARCA5	100	98.859	Ailuropoda_melanoleuca
ENSCCAG00000027215	SMARCA5	96	96.715	ENSAPLG00000009206	SMARCA5	100	96.715	Anas_platyrhynchos
ENSCCAG00000027215	SMARCA5	99	96.590	ENSACAG00000003038	SMARCA5	99	93.913	Anolis_carolinensis
ENSCCAG00000027215	SMARCA5	100	99.900	ENSANAG00000019345	SMARCA5	100	99.900	Aotus_nancymaae
ENSCCAG00000027215	SMARCA5	99	99.297	ENSBTAG00000003399	SMARCA5	100	98.289	Bos_taurus
ENSCCAG00000027215	SMARCA5	100	100.000	ENSCJAG00000002735	SMARCA5	100	100.000	Callithrix_jacchus
ENSCCAG00000027215	SMARCA5	100	98.669	ENSCAFG00000007525	SMARCA5	100	98.669	Canis_familiaris
ENSCCAG00000027215	SMARCA5	98	99.283	ENSCAFG00020025641	SMARCA5	99	98.643	Canis_lupus_dingo
ENSCCAG00000027215	SMARCA5	100	98.764	ENSCHIG00000013730	-	100	98.764	Capra_hircus
ENSCCAG00000027215	SMARCA5	100	97.053	ENSCHIG00000016375	-	100	97.053	Capra_hircus
ENSCCAG00000027215	SMARCA5	99	99.597	ENSTSYG00000009954	SMARCA5	99	99.597	Carlito_syrichta
ENSCCAG00000027215	SMARCA5	97	99.070	ENSCAPG00000013747	SMARCA5	95	99.070	Cavia_aperea
ENSCCAG00000027215	SMARCA5	99	99.096	ENSCPOG00000002259	SMARCA5	100	97.909	Cavia_porcellus
ENSCCAG00000027215	SMARCA5	100	99.620	ENSCATG00000044917	SMARCA5	100	99.620	Cercocebus_atys
ENSCCAG00000027215	SMARCA5	99	99.295	ENSCLAG00000006153	SMARCA5	100	99.295	Chinchilla_lanigera
ENSCCAG00000027215	SMARCA5	97	99.897	ENSCSAG00000003448	SMARCA5	100	99.897	Chlorocebus_sabaeus
ENSCCAG00000027215	SMARCA5	91	98.405	ENSCHOG00000011724	SMARCA5	90	98.405	Choloepus_hoffmanni
ENSCCAG00000027215	SMARCA5	99	97.994	ENSCPBG00000027535	SMARCA5	96	98.195	Chrysemys_picta_bellii
ENSCCAG00000027215	SMARCA5	100	99.430	ENSCANG00000041629	SMARCA5	100	99.430	Colobus_angolensis_palliatus
ENSCCAG00000027215	SMARCA5	99	99.197	ENSCGRG00001012719	Smarca5	99	97.814	Cricetulus_griseus_chok1gshd
ENSCCAG00000027215	SMARCA5	99	99.396	ENSCGRG00000001417	Smarca5	99	99.396	Cricetulus_griseus_crigri
ENSCCAG00000027215	SMARCA5	99	96.486	ENSDNOG00000009158	SMARCA5	97	95.878	Dasypus_novemcinctus
ENSCCAG00000027215	SMARCA5	95	90.717	ENSDORG00000003466	Smarca5	97	90.717	Dipodomys_ordii
ENSCCAG00000027215	SMARCA5	97	85.847	ENSEBUG00000014773	SMARCA5	96	85.847	Eptatretus_burgeri
ENSCCAG00000027215	SMARCA5	100	99.049	ENSEASG00005001866	SMARCA5	100	99.049	Equus_asinus_asinus
ENSCCAG00000027215	SMARCA5	100	99.049	ENSECAG00000002676	SMARCA5	100	99.049	Equus_caballus
ENSCCAG00000027215	SMARCA5	99	95.166	ENSEEUG00000013176	SMARCA5	100	95.166	Erinaceus_europaeus
ENSCCAG00000027215	SMARCA5	97	89.485	ENSELUG00000014653	SMARCA5	99	89.485	Esox_lucius
ENSCCAG00000027215	SMARCA5	100	98.859	ENSFCAG00000004544	SMARCA5	100	98.859	Felis_catus
ENSCCAG00000027215	SMARCA5	97	97.320	ENSFALG00000004987	SMARCA5	100	97.320	Ficedula_albicollis
ENSCCAG00000027215	SMARCA5	99	99.496	ENSFDAG00000021016	SMARCA5	100	99.496	Fukomys_damarensis
ENSCCAG00000027215	SMARCA5	98	89.560	ENSGMOG00000007519	SMARCA5	94	89.560	Gadus_morhua
ENSCCAG00000027215	SMARCA5	99	97.289	ENSGALG00000009913	SMARCA5	96	97.490	Gallus_gallus
ENSCCAG00000027215	SMARCA5	98	90.686	ENSGACG00000017238	SMARCA5	95	90.686	Gasterosteus_aculeatus
ENSCCAG00000027215	SMARCA5	99	98.094	ENSGAGG00000019882	SMARCA5	96	98.295	Gopherus_agassizii
ENSCCAG00000027215	SMARCA5	100	99.525	ENSGGOG00000012595	SMARCA5	100	99.525	Gorilla_gorilla
ENSCCAG00000027215	SMARCA5	99	99.197	ENSHGLG00000000816	-	99	97.909	Heterocephalus_glaber_female
ENSCCAG00000027215	SMARCA5	99	89.558	ENSHGLG00000000317	-	95	89.659	Heterocephalus_glaber_female
ENSCCAG00000027215	SMARCA5	99	99.396	ENSHGLG00100018421	-	100	99.396	Heterocephalus_glaber_male
ENSCCAG00000027215	SMARCA5	100	98.670	ENSSTOG00000010683	SMARCA5	99	98.670	Ictidomys_tridecemlineatus
ENSCCAG00000027215	SMARCA5	99	98.896	ENSJJAG00000014965	Smarca5	100	97.529	Jaculus_jaculus
ENSCCAG00000027215	SMARCA5	99	95.459	ENSLACG00000007091	SMARCA5	97	95.459	Latimeria_chalumnae
ENSCCAG00000027215	SMARCA5	99	92.386	ENSLOCG00000008966	SMARCA5	96	92.386	Lepisosteus_oculatus
ENSCCAG00000027215	SMARCA5	100	98.669	ENSLAFG00000007795	SMARCA5	100	98.669	Loxodonta_africana
ENSCCAG00000027215	SMARCA5	100	99.620	ENSMFAG00000043649	SMARCA5	100	99.620	Macaca_fascicularis
ENSCCAG00000027215	SMARCA5	100	99.620	ENSMMUG00000000829	SMARCA5	100	99.620	Macaca_mulatta
ENSCCAG00000027215	SMARCA5	100	99.620	ENSMNEG00000031916	SMARCA5	100	99.620	Macaca_nemestrina
ENSCCAG00000027215	SMARCA5	100	99.620	ENSMLEG00000042393	SMARCA5	100	99.620	Mandrillus_leucophaeus
ENSCCAG00000027215	SMARCA5	99	97.485	ENSMGAG00000003517	SMARCA5	99	97.485	Meleagris_gallopavo
ENSCCAG00000027215	SMARCA5	100	99.198	ENSMAUG00000015902	Smarca5	98	99.496	Mesocricetus_auratus
ENSCCAG00000027215	SMARCA5	100	99.049	ENSMICG00000003971	SMARCA5	100	99.049	Microcebus_murinus
ENSCCAG00000027215	SMARCA5	99	98.996	ENSMOCG00000016986	-	99	97.624	Microtus_ochrogaster
ENSCCAG00000027215	SMARCA5	99	98.795	ENSMODG00000000391	SMARCA5	95	98.996	Monodelphis_domestica
ENSCCAG00000027215	SMARCA5	99	99.096	ENSMUSG00000031715	Smarca5	100	97.814	Mus_musculus
ENSCCAG00000027215	SMARCA5	99	99.297	MGP_PahariEiJ_G0022862	Smarca5	100	98.004	Mus_pahari
ENSCCAG00000027215	SMARCA5	100	98.859	ENSMLUG00000000468	SMARCA5	100	98.859	Myotis_lucifugus
ENSCCAG00000027215	SMARCA5	99	99.297	ENSNGAG00000000441	Smarca5	100	98.004	Nannospalax_galili
ENSCCAG00000027215	SMARCA5	100	99.620	ENSNLEG00000005383	SMARCA5	100	99.620	Nomascus_leucogenys
ENSCCAG00000027215	SMARCA5	97	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSCCAG00000027215	SMARCA5	90	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSCCAG00000027215	SMARCA5	97	99.071	ENSOANG00000013921	SMARCA5	100	99.071	Ornithorhynchus_anatinus
ENSCCAG00000027215	SMARCA5	97	99.690	ENSOCUG00000013042	SMARCA5	100	99.690	Oryctolagus_cuniculus
ENSCCAG00000027215	SMARCA5	100	99.049	ENSOGAG00000009702	SMARCA5	100	99.049	Otolemur_garnettii
ENSCCAG00000027215	SMARCA5	99	99.095	ENSOARG00000010589	SMARCA5	99	98.573	Ovis_aries
ENSCCAG00000027215	SMARCA5	100	99.335	ENSPPAG00000028523	SMARCA5	100	99.335	Pan_paniscus
ENSCCAG00000027215	SMARCA5	99	93.474	ENSPPRG00000004925	SMARCA5	97	94.210	Panthera_pardus
ENSCCAG00000027215	SMARCA5	99	99.398	ENSPTIG00000020959	SMARCA5	97	99.109	Panthera_tigris_altaica
ENSCCAG00000027215	SMARCA5	100	99.430	ENSPTRG00000016472	SMARCA5	100	99.430	Pan_troglodytes
ENSCCAG00000027215	SMARCA5	100	99.620	ENSPANG00000001175	SMARCA5	100	99.620	Papio_anubis
ENSCCAG00000027215	SMARCA5	98	90.881	ENSPKIG00000015699	SMARCA5	98	89.835	Paramormyrops_kingsleyae
ENSCCAG00000027215	SMARCA5	98	91.104	ENSPKIG00000015885	SMARCA5	100	91.340	Paramormyrops_kingsleyae
ENSCCAG00000027215	SMARCA5	99	95.787	ENSPSIG00000004177	SMARCA5	100	95.988	Pelodiscus_sinensis
ENSCCAG00000027215	SMARCA5	97	90.226	ENSPMGG00000012316	SMARCA5	100	90.226	Periophthalmus_magnuspinnatus
ENSCCAG00000027215	SMARCA5	100	99.198	ENSPEMG00000008060	Smarca5	98	99.198	Peromyscus_maniculatus_bairdii
ENSCCAG00000027215	SMARCA5	64	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSCCAG00000027215	SMARCA5	98	70.749	ENSPMAG00000006011	SMARCA5	80	86.062	Petromyzon_marinus
ENSCCAG00000027215	SMARCA5	99	98.795	ENSPCIG00000003926	SMARCA5	95	98.996	Phascolarctos_cinereus
ENSCCAG00000027215	SMARCA5	100	99.525	ENSPPYG00000015091	SMARCA5	100	99.525	Pongo_abelii
ENSCCAG00000027215	SMARCA5	84	95.667	ENSPCAG00000014230	SMARCA5	88	90.783	Procavia_capensis
ENSCCAG00000027215	SMARCA5	100	96.293	ENSPCOG00000026744	SMARCA5	100	96.293	Propithecus_coquereli
ENSCCAG00000027215	SMARCA5	99	99.297	ENSPVAG00000006482	SMARCA5	100	98.573	Pteropus_vampyrus
ENSCCAG00000027215	SMARCA5	99	89.558	ENSPNAG00000027824	SMARCA5	97	90.249	Pygocentrus_nattereri
ENSCCAG00000027215	SMARCA5	99	99.196	ENSRNOG00000018149	Smarca5	100	99.397	Rattus_norvegicus
ENSCCAG00000027215	SMARCA5	100	99.430	ENSRBIG00000044644	SMARCA5	100	99.430	Rhinopithecus_bieti
ENSCCAG00000027215	SMARCA5	99	99.698	ENSRROG00000029591	SMARCA5	99	99.698	Rhinopithecus_roxellana
ENSCCAG00000027215	SMARCA5	100	99.715	ENSSBOG00000036257	SMARCA5	100	99.715	Saimiri_boliviensis_boliviensis
ENSCCAG00000027215	SMARCA5	99	98.993	ENSSHAG00000008464	SMARCA5	100	98.993	Sarcophilus_harrisii
ENSCCAG00000027215	SMARCA5	99	90.679	ENSSFOG00015013252	SMARCA5	97	90.151	Scleropages_formosus
ENSCCAG00000027215	SMARCA5	99	96.465	ENSSPUG00000007604	SMARCA5	99	96.465	Sphenodon_punctatus
ENSCCAG00000027215	SMARCA5	99	99.398	ENSSSCG00000009047	SMARCA5	100	98.194	Sus_scrofa
ENSCCAG00000027215	SMARCA5	100	96.493	ENSTGUG00000002408	SMARCA5	99	96.493	Taeniopygia_guttata
ENSCCAG00000027215	SMARCA5	98	99.283	ENSUAMG00000023495	SMARCA5	99	98.837	Ursus_americanus
ENSCCAG00000027215	SMARCA5	99	99.398	ENSUMAG00000015324	SMARCA5	97	99.398	Ursus_maritimus
ENSCCAG00000027215	SMARCA5	100	98.289	ENSVPAG00000008982	SMARCA5	100	98.289	Vicugna_pacos
ENSCCAG00000027215	SMARCA5	100	98.859	ENSVVUG00000017473	SMARCA5	100	98.859	Vulpes_vulpes
ENSCCAG00000027215	SMARCA5	94	93.717	ENSXETG00000017566	smarca5	95	93.228	Xenopus_tropicalis