EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000027450 (Gene tree)
Gene ID: 108289529
Gene Symbol: -
Alias: -
Full Name: DNA dC->dU-editing enzyme APOBEC-3G-like
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 12313 bases
Position: chrKV389830.1:1978290-1990602
Accession: 108289529
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000019211	APOBEC_N	PF08210.11	1.7e-85	1	2
ENSCCAP00000019211	APOBEC_N	PF08210.11	1.7e-85	2	2
ENSCCAP00000019211	APOBEC_C	PF05240.14	3.7e-61	1	2
ENSCCAP00000019211	APOBEC_C	PF05240.14	3.7e-61	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000036692	-	1155	XM_017509035	ENSCCAP00000019211	384 (aa)	XP_017364524	A0A2K5QTJ9

Gene Model

Click here to download ENSCCAG00000027450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000027450's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000027450	-	51	38.158	ENSCCAG00000022258	APOBEC1	50	38.158
ENSCCAG00000027450	-	98	82.240	ENSCCAG00000033147	-	93	82.240
ENSCCAG00000027450	-	99	75.066	ENSCCAG00000032232	-	99	75.066
ENSCCAG00000027450	-	98	47.368	ENSCCAG00000030932	-	84	47.368
ENSCCAG00000027450	-	97	70.856	ENSCCAG00000032509	-	99	70.856
ENSCCAG00000027450	-	89	37.374	ENSCCAG00000008525	APOBEC3H	91	36.943
ENSCCAG00000027450	-	77	43.243	ENSCCAG00000030398	AICDA	94	43.243
ENSCCAG00000027450	-	95	69.841	ENSCCAG00000030928	-	92	69.841

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000027450	-	96	67.876	ENSG00000128383	APOBEC3A	95	67.876	Homo_sapiens
ENSCCAG00000027450	-	100	61.399	ENSG00000179750	APOBEC3B	100	61.399	Homo_sapiens
ENSCCAG00000027450	-	99	70.213	ENSCJAG00000012500	-	100	70.213	Callithrix_jacchus
ENSCCAG00000027450	-	99	60.733	ENSTSYG00000035593	-	99	60.733	Carlito_syrichta
ENSCCAG00000027450	-	96	68.912	ENSCATG00000013527	-	96	68.912	Cercocebus_atys
ENSCCAG00000027450	-	99	61.257	ENSCSAG00000006445	-	77	61.257	Chlorocebus_sabaeus
ENSCCAG00000027450	-	74	60.959	ENSCSAG00000018401	-	70	60.959	Chlorocebus_sabaeus
ENSCCAG00000027450	-	98	67.010	ENSCANG00000030513	-	98	67.010	Colobus_angolensis_palliatus
ENSCCAG00000027450	-	100	61.140	ENSGGOG00000006721	APOBEC3B	100	61.140	Gorilla_gorilla
ENSCCAG00000027450	-	96	65.803	ENSMFAG00000008980	APOBEC3A	96	65.803	Macaca_fascicularis
ENSCCAG00000027450	-	96	67.708	ENSMMUG00000004015	-	98	67.708	Macaca_mulatta
ENSCCAG00000027450	-	96	66.321	ENSMMUG00000042504	APOBEC3A	97	65.426	Macaca_mulatta
ENSCCAG00000027450	-	99	58.683	ENSMNEG00000043211	-	95	58.683	Macaca_nemestrina
ENSCCAG00000027450	-	100	62.176	ENSMLEG00000004809	-	100	62.176	Mandrillus_leucophaeus
ENSCCAG00000027450	-	99	60.358	ENSNLEG00000015215	-	95	66.146	Nomascus_leucogenys
ENSCCAG00000027450	-	100	61.917	ENSPPAG00000009288	APOBEC3B	100	61.917	Pan_paniscus
ENSCCAG00000027450	-	96	65.285	ENSPTRG00000014384	APOBEC3B	95	65.285	Pan_troglodytes
ENSCCAG00000027450	-	100	69.870	ENSPANG00000006941	APOBEC3B	100	69.870	Papio_anubis
ENSCCAG00000027450	-	100	61.658	ENSPPYG00000011831	-	100	61.658	Pongo_abelii
ENSCCAG00000027450	-	68	62.759	ENSPCOG00000017606	-	94	62.759	Propithecus_coquereli
ENSCCAG00000027450	-	96	65.464	ENSRBIG00000042829	-	100	65.263	Rhinopithecus_bieti
ENSCCAG00000027450	-	97	65.782	ENSRROG00000028773	APOBEC3G	100	65.263	Rhinopithecus_roxellana