EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000027631 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 5774 bases
Position: chrKV389935.1:204466-210239
Accession: 108292812
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000019579	RRM_1	PF00076.22	3.6e-14	1	1
ENSCCAP00000019584	RRM_1	PF00076.22	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000037062	PABPN1L-201	4057	XM_017513917	ENSCCAP00000019579	274 (aa)	XP_017369406	A0A2K5QUM6
ENSCCAT00000037067	PABPN1L-202	762	-	ENSCCAP00000019584	253 (aa)	-	A0A2K5QUN1

Gene Model

Click here to download ENSCCAG00000027631's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000027631's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000027631	PABPN1L	71	50.990	ENSCCAG00000033954	BCL2L2-PABPN1	71	52.683

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000027631	PABPN1L	100	82.374	ENSG00000205022	PABPN1L	100	82.014	Homo_sapiens
ENSCCAG00000027631	PABPN1L	65	55.208	ENSAPOG00000000685	PABPN1L	61	55.330	Acanthochromis_polyacanthus
ENSCCAG00000027631	PABPN1L	57	56.970	ENSACIG00000021400	PABPN1L	96	56.725	Amphilophus_citrinellus
ENSCCAG00000027631	PABPN1L	58	55.152	ENSAOCG00000019844	PABPN1L	76	53.846	Amphiprion_ocellaris
ENSCCAG00000027631	PABPN1L	58	55.152	ENSAPEG00000019534	PABPN1L	76	53.846	Amphiprion_percula
ENSCCAG00000027631	PABPN1L	65	54.688	ENSATEG00000011646	PABPN1L	74	55.208	Anabas_testudineus
ENSCCAG00000027631	PABPN1L	70	59.896	ENSACAG00000013250	PABPN1L	99	59.896	Anolis_carolinensis
ENSCCAG00000027631	PABPN1L	100	92.095	ENSANAG00000038178	PABPN1L	100	92.095	Aotus_nancymaae
ENSCCAG00000027631	PABPN1L	70	52.736	ENSACLG00000025147	PABPN1L	75	53.695	Astatotilapia_calliptera
ENSCCAG00000027631	PABPN1L	58	57.595	ENSAMXG00000010873	PABPN1L	71	54.545	Astyanax_mexicanus
ENSCCAG00000027631	PABPN1L	100	62.774	ENSBTAG00000023752	-	100	63.441	Bos_taurus
ENSCCAG00000027631	PABPN1L	51	75.887	ENSBTAG00000006727	-	86	75.887	Bos_taurus
ENSCCAG00000027631	PABPN1L	100	92.754	ENSCJAG00000045284	PABPN1L	100	92.754	Callithrix_jacchus
ENSCCAG00000027631	PABPN1L	100	56.314	ENSCHIG00000013987	PABPN1L	100	55.973	Capra_hircus
ENSCCAG00000027631	PABPN1L	95	64.576	ENSCAPG00000007240	PABPN1L	100	64.815	Cavia_aperea
ENSCCAG00000027631	PABPN1L	100	66.426	ENSCPOG00000025951	PABPN1L	100	66.304	Cavia_porcellus
ENSCCAG00000027631	PABPN1L	100	82.609	ENSCATG00000031060	PABPN1L	100	84.058	Cercocebus_atys
ENSCCAG00000027631	PABPN1L	100	70.397	ENSCLAG00000000704	PABPN1L	100	69.203	Chinchilla_lanigera
ENSCCAG00000027631	PABPN1L	100	78.082	ENSCSAG00000002881	PABPN1L	100	79.452	Chlorocebus_sabaeus
ENSCCAG00000027631	PABPN1L	70	58.462	ENSCPBG00000023441	PABPN1L	61	60.714	Chrysemys_picta_bellii
ENSCCAG00000027631	PABPN1L	100	84.058	ENSCANG00000039336	PABPN1L	100	84.058	Colobus_angolensis_palliatus
ENSCCAG00000027631	PABPN1L	100	70.758	ENSCGRG00001013211	Pabpn1l	100	69.565	Cricetulus_griseus_chok1gshd
ENSCCAG00000027631	PABPN1L	100	70.758	ENSCGRG00000015868	Pabpn1l	100	69.565	Cricetulus_griseus_crigri
ENSCCAG00000027631	PABPN1L	58	54.878	ENSCSEG00000001142	pabpn1l	75	52.941	Cynoglossus_semilaevis
ENSCCAG00000027631	PABPN1L	100	55.357	ENSDNOG00000034677	PABPN1L	100	56.940	Dasypus_novemcinctus
ENSCCAG00000027631	PABPN1L	100	67.742	ENSEASG00005000777	PABPN1L	100	66.308	Equus_asinus_asinus
ENSCCAG00000027631	PABPN1L	100	68.100	ENSECAG00000000378	PABPN1L	100	66.667	Equus_caballus
ENSCCAG00000027631	PABPN1L	100	57.664	ENSEEUG00000004747	PABPN1L	100	56.204	Erinaceus_europaeus
ENSCCAG00000027631	PABPN1L	64	54.857	ENSELUG00000018385	PABPN1L	72	54.450	Esox_lucius
ENSCCAG00000027631	PABPN1L	100	70.357	ENSFCAG00000010465	PABPN1L	100	67.742	Felis_catus
ENSCCAG00000027631	PABPN1L	71	55.556	ENSFALG00000003319	PABPN1L	80	55.224	Ficedula_albicollis
ENSCCAG00000027631	PABPN1L	100	70.397	ENSFDAG00000021067	PABPN1L	100	69.675	Fukomys_damarensis
ENSCCAG00000027631	PABPN1L	58	54.037	ENSFHEG00000018295	PABPN1L	71	51.515	Fundulus_heteroclitus
ENSCCAG00000027631	PABPN1L	54	55.414	ENSGMOG00000001475	PABPN1L	68	55.263	Gadus_morhua
ENSCCAG00000027631	PABPN1L	57	63.694	ENSGALG00000006242	PABPN1L	93	61.963	Gallus_gallus
ENSCCAG00000027631	PABPN1L	58	55.758	ENSGACG00000015428	PABPN1L	72	53.922	Gasterosteus_aculeatus
ENSCCAG00000027631	PABPN1L	65	60.894	ENSGAGG00000010613	PABPN1L	59	60.894	Gopherus_agassizii
ENSCCAG00000027631	PABPN1L	100	82.246	ENSGGOG00000012670	PABPN1L	100	83.333	Gorilla_gorilla
ENSCCAG00000027631	PABPN1L	70	53.234	ENSHBUG00000002388	PABPN1L	76	53.695	Haplochromis_burtoni
ENSCCAG00000027631	PABPN1L	96	69.434	ENSHGLG00000014207	PABPN1L	100	68.561	Heterocephalus_glaber_female
ENSCCAG00000027631	PABPN1L	96	69.434	ENSHGLG00100005230	PABPN1L	100	68.561	Heterocephalus_glaber_male
ENSCCAG00000027631	PABPN1L	62	51.977	ENSHCOG00000004151	PABPN1L	74	50.704	Hippocampus_comes
ENSCCAG00000027631	PABPN1L	58	56.875	ENSIPUG00000023583	PABPN1L	88	55.191	Ictalurus_punctatus
ENSCCAG00000027631	PABPN1L	100	69.286	ENSSTOG00000020814	PABPN1L	100	67.384	Ictidomys_tridecemlineatus
ENSCCAG00000027631	PABPN1L	100	69.424	ENSJJAG00000006433	Pabpn1l	100	67.148	Jaculus_jaculus
ENSCCAG00000027631	PABPN1L	58	54.545	ENSLBEG00000011647	PABPN1L	69	52.427	Labrus_bergylta
ENSCCAG00000027631	PABPN1L	70	65.990	ENSLAFG00000025902	-	78	65.990	Loxodonta_africana
ENSCCAG00000027631	PABPN1L	100	83.333	ENSMFAG00000002924	PABPN1L	100	84.783	Macaca_fascicularis
ENSCCAG00000027631	PABPN1L	100	82.971	ENSMMUG00000012438	PABPN1L	100	84.420	Macaca_mulatta
ENSCCAG00000027631	PABPN1L	100	82.971	ENSMNEG00000044808	PABPN1L	100	84.420	Macaca_nemestrina
ENSCCAG00000027631	PABPN1L	100	82.609	ENSMLEG00000032667	PABPN1L	100	84.058	Mandrillus_leucophaeus
ENSCCAG00000027631	PABPN1L	70	52.736	ENSMZEG00005002186	PABPN1L	75	53.695	Maylandia_zebra
ENSCCAG00000027631	PABPN1L	100	65.580	ENSMAUG00000014032	Pabpn1l	100	65.909	Mesocricetus_auratus
ENSCCAG00000027631	PABPN1L	100	73.646	ENSMICG00000028179	PABPN1L	100	72.826	Microcebus_murinus
ENSCCAG00000027631	PABPN1L	100	66.426	ENSMOCG00000007955	Pabpn1l	100	65.217	Microtus_ochrogaster
ENSCCAG00000027631	PABPN1L	100	52.857	ENSMODG00000003873	-	100	51.071	Monodelphis_domestica
ENSCCAG00000027631	PABPN1L	61	55.556	ENSMALG00000016926	PABPN1L	75	52.451	Monopterus_albus
ENSCCAG00000027631	PABPN1L	100	64.621	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	61.957	Mus_caroli
ENSCCAG00000027631	PABPN1L	100	63.899	ENSMUSG00000069867	Pabpn1l	100	61.232	Mus_musculus
ENSCCAG00000027631	PABPN1L	100	64.982	MGP_PahariEiJ_G0023268	Pabpn1l	100	63.538	Mus_pahari
ENSCCAG00000027631	PABPN1L	100	63.538	MGP_SPRETEiJ_G0032788	Pabpn1l	100	62.094	Mus_spretus
ENSCCAG00000027631	PABPN1L	96	50.719	ENSMLUG00000003228	PABPN1L	95	49.458	Myotis_lucifugus
ENSCCAG00000027631	PABPN1L	100	68.478	ENSNGAG00000023992	Pabpn1l	100	66.304	Nannospalax_galili
ENSCCAG00000027631	PABPN1L	54	59.236	ENSNBRG00000017078	PABPN1L	77	54.787	Neolamprologus_brichardi
ENSCCAG00000027631	PABPN1L	100	67.266	ENSOPRG00000005597	PABPN1L	100	66.065	Ochotona_princeps
ENSCCAG00000027631	PABPN1L	100	60.069	ENSODEG00000004649	PABPN1L	100	58.885	Octodon_degus
ENSCCAG00000027631	PABPN1L	100	52.878	ENSOANG00000013901	PABPN1L	100	53.957	Ornithorhynchus_anatinus
ENSCCAG00000027631	PABPN1L	70	50.754	ENSORLG00000026560	PABPN1L	75	50.754	Oryzias_latipes
ENSCCAG00000027631	PABPN1L	70	50.754	ENSORLG00020015068	PABPN1L	75	50.754	Oryzias_latipes_hni
ENSCCAG00000027631	PABPN1L	70	50.754	ENSORLG00015000397	PABPN1L	75	50.754	Oryzias_latipes_hsok
ENSCCAG00000027631	PABPN1L	74	49.282	ENSOMEG00000017896	PABPN1L	56	49.282	Oryzias_melastigma
ENSCCAG00000027631	PABPN1L	100	74.007	ENSOGAG00000000433	PABPN1L	100	71.014	Otolemur_garnettii
ENSCCAG00000027631	PABPN1L	100	62.046	ENSOARG00000013682	PABPN1L	100	62.046	Ovis_aries
ENSCCAG00000027631	PABPN1L	100	82.374	ENSPPAG00000028866	PABPN1L	100	82.014	Pan_paniscus
ENSCCAG00000027631	PABPN1L	100	70.000	ENSPPRG00000015106	PABPN1L	100	67.384	Panthera_pardus
ENSCCAG00000027631	PABPN1L	93	65.234	ENSPTIG00000015606	PABPN1L	100	61.569	Panthera_tigris_altaica
ENSCCAG00000027631	PABPN1L	100	82.374	ENSPTRG00000031120	PABPN1L	100	82.014	Pan_troglodytes
ENSCCAG00000027631	PABPN1L	100	82.971	ENSPANG00000026039	PABPN1L	100	84.420	Papio_anubis
ENSCCAG00000027631	PABPN1L	70	55.330	ENSPSIG00000003404	PABPN1L	100	57.360	Pelodiscus_sinensis
ENSCCAG00000027631	PABPN1L	54	58.974	ENSPMGG00000013927	PABPN1L	74	61.719	Periophthalmus_magnuspinnatus
ENSCCAG00000027631	PABPN1L	100	69.203	ENSPEMG00000016624	Pabpn1l	100	67.754	Peromyscus_maniculatus_bairdii
ENSCCAG00000027631	PABPN1L	52	63.946	ENSPCIG00000007038	-	100	63.946	Phascolarctos_cinereus
ENSCCAG00000027631	PABPN1L	100	82.014	ENSPPYG00000007655	PABPN1L	100	82.014	Pongo_abelii
ENSCCAG00000027631	PABPN1L	100	71.377	ENSPCOG00000024077	PABPN1L	100	71.377	Propithecus_coquereli
ENSCCAG00000027631	PABPN1L	100	67.376	ENSPVAG00000002716	PABPN1L	100	65.603	Pteropus_vampyrus
ENSCCAG00000027631	PABPN1L	70	52.736	ENSPNYG00000004803	PABPN1L	75	53.695	Pundamilia_nyererei
ENSCCAG00000027631	PABPN1L	100	68.231	ENSRNOG00000029558	Pabpn1l	100	65.580	Rattus_norvegicus
ENSCCAG00000027631	PABPN1L	100	82.609	ENSRBIG00000030740	PABPN1L	100	84.058	Rhinopithecus_bieti
ENSCCAG00000027631	PABPN1L	100	81.884	ENSRROG00000032240	-	100	82.971	Rhinopithecus_roxellana
ENSCCAG00000027631	PABPN1L	99	83.273	ENSRROG00000035483	-	99	85.091	Rhinopithecus_roxellana
ENSCCAG00000027631	PABPN1L	100	94.161	ENSSBOG00000018410	PABPN1L	100	94.161	Saimiri_boliviensis_boliviensis
ENSCCAG00000027631	PABPN1L	100	52.265	ENSSHAG00000010001	-	100	50.338	Sarcophilus_harrisii
ENSCCAG00000027631	PABPN1L	59	53.704	ENSSMAG00000021348	PABPN1L	72	52.709	Scophthalmus_maximus
ENSCCAG00000027631	PABPN1L	58	53.939	ENSSDUG00000006986	PABPN1L	76	52.657	Seriola_dumerili
ENSCCAG00000027631	PABPN1L	58	54.545	ENSSLDG00000021845	PABPN1L	76	53.140	Seriola_lalandi_dorsalis
ENSCCAG00000027631	PABPN1L	94	50.000	ENSSARG00000005178	-	99	48.837	Sorex_araneus
ENSCCAG00000027631	PABPN1L	69	58.639	ENSSPUG00000007031	PABPN1L	84	58.854	Sphenodon_punctatus
ENSCCAG00000027631	PABPN1L	70	53.171	ENSSPAG00000017978	PABPN1L	76	53.110	Stegastes_partitus
ENSCCAG00000027631	PABPN1L	100	66.667	ENSSSCG00000036367	PABPN1L	100	67.730	Sus_scrofa
ENSCCAG00000027631	PABPN1L	58	53.374	ENSTRUG00000024725	PABPN1L	79	52.239	Takifugu_rubripes
ENSCCAG00000027631	PABPN1L	100	64.748	ENSTTRG00000004691	PABPN1L	100	67.384	Tursiops_truncatus
ENSCCAG00000027631	PABPN1L	59	52.353	ENSXETG00000011258	pabpn1l	96	50.463	Xenopus_tropicalis